BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg497174
Length=842
Score E
Sequences producing significant alignments: (Bits) Value
AT2G16832.1 | Symbols: | transposable element gene | chr2:7293... 444 7e-124
AT2G17460.1 | Symbols: | transposable element gene | chr2:7582... 444 7e-124
AT3G29777.1 | Symbols: | transposable element gene | chr3:1165... 438 3e-122
AT1G30980.1 | Symbols: | transposable element gene | chr1:1104... 427 7e-119
AT4G04495.1 | Symbols: | transposable element gene | chr4:2236... 425 3e-118
AT3G28800.1 | Symbols: | transposable element gene | chr3:1081... 424 9e-118
AT5G28637.1 | Symbols: | transposable element gene | chr5:1064... 416 2e-115
AT3G59860.1 | Symbols: | transposable element gene | chr3:2211... 416 2e-115
AT1G55400.1 | Symbols: | transposable element gene | chr1:2068... 379 2e-104
AT5G03950.1 | Symbols: | transposable element gene | chr5:1066... 374 1e-102
AT5G44313.1 | Symbols: | transposable element gene | chr5:1785... 374 1e-102
AT5G27590.1 | Symbols: | transposable element gene | chr5:9738... 363 2e-99
AT1G17900.1 | Symbols: | transposable element gene | chr1:6157... 363 2e-99
AT5G40110.1 | Symbols: | transposable element gene | chr5:1604... 346 2e-94
AT1G32505.1 | Symbols: | transposable element gene | chr1:1175... 340 1e-92
AT3G45120.1 | Symbols: | transposable element gene | chr3:1651... 248 6e-65
AT4G05584.1 | Symbols: | transposable element gene | chr4:2864... 217 2e-55
AT2G16820.1 | Symbols: | transposable element gene | chr2:7290... 174 1e-42
AT4G05583.2 | Symbols: | transposable element gene | chr4:2860... 130 2e-29
AT3G42626.1 | Symbols: | transposable element gene | chr3:1471... 80.5 2e-14
AT2G06600.1 | Symbols: | transposable element gene | chr2:2639... 80.5 2e-14
AT5G28487.1 | Symbols: | transposable element gene | chr5:1044... 75.0 1e-12
AT2G12150.1 | Symbols: | transposable element gene | chr2:4884... 75.0 1e-12
AT2G05490.1 | Symbols: | transposable element gene | chr2:2006... 71.3 1e-11
AT1G45070.1 | Symbols: | transposable element gene | chr1:1703... 71.3 1e-11
AT3G28110.1 | Symbols: | transposable element gene | chr3:1046... 69.4 5e-11
AT2G16150.1 | Symbols: | transposable element gene | chr2:7009... 69.4 5e-11
AT1G29075.1 | Symbols: | transposable element gene | chr1:1015... 60.2 3e-08
> AT2G16832.1 | Symbols: | transposable element gene | chr2:7293623-7294681
FORWARD LENGTH=1059
Length=1059
Score = 444 bits (240), Expect = 7e-124
Identities = 279/298 (94%), Gaps = 2/298 (1%)
Strand=Plus/Minus
Query 1 TCATACGATGTGATTTTGAAACATTCTGAATTGTTGACAACTTGAGCTGTCAAATGCCAT 60
|||||||||||||||||||||||||||||||| ||||| || ||||| |||||||| |||
Sbjct 1046 TCATACGATGTGATTTTGAAACATTCTGAATTCTTGACGACATGAGCAGTCAAATGTCAT 987
Query 61 GGACAAGTATCATCAACGCAGACCATCTCCAATCTTGTAGGACATGACCTATGTTGCTTG 120
|||||||||||||||||||| |||||| |||||||||||||| |||||||| ||||||||
Sbjct 986 GGACAAGTATCATCAACGCATACCATCACCAATCTTGTAGGATATGACCTAGGTTGCTTG 927
Query 121 TAGC-AAAAGCATTGTTTGATTGCGAGATAAGACATTGTTTGTTGTATGACTTTTCTGTT 179
|||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 926 TAGCAAAAAG-ATTGTTTGATTGCGAGATAAGACATTGTTTGTTGTATGACTTTTCTGTT 868
Query 180 CTTAAAAACACTCTCCAATCTGTAGTGTATGTACATTGGTACAAACCATGTTGACACGTA 239
||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| ||
Sbjct 867 CTTAAAAACACTCTCCAATCTATAGTGTACGTACATTGGTACAAACCATGTTGACACATA 808
Query 240 CGTCTTGGAGTCACCGTTGGTGTACGGTCACCCGAATGAGAAATGTTATCTCCGCCAG 297
| |||||||||||| | ||||||||||||||||| ||||||||||||||||||||||
Sbjct 807 CTTCTTGGAGTCACAGCTGGTGTACGGTCACCCGGGTGAGAAATGTTATCTCCGCCAG 750
Score = 346 bits (187), Expect = 2e-94
Identities = 333/398 (84%), Gaps = 32/398 (8%)
Strand=Plus/Minus
Query 470 GATCGAGGGTACTTCCCCCCATAGATCCATCATCACCCTGATAATCATCATACCCAGCAC 529
|||||| ||||||| |||||||||||||||| |||| ||||||||||||||||||| |||
Sbjct 564 GATCGATGGTACTT-CCCCCATAGATCCATCGTCACACTGATAATCATCATACCCATCAC 506
Query 530 CATCTTCGTTGTCCTCCTCCTCTTCTTCATCCTCATCTGTTTTATCGTCTTCAACGTCGT 589
|||||||||||| | || || | |||||||||||||||||||||||||||||| |||||
Sbjct 505 CATCTTCGTTGT-C-CC-CC-CAACTTCATCCTCATCTGTTTTATCGTCTTCAATGTCGT 450
Query 590 CTTGCTCATCTACGGCCTCATTATTTCCATCTACATTTGAAGCACTCCCACACACACGGT 649
|||||| ||||||||||||||||||| |||| |||||| || |||| ||||||||||||
Sbjct 449 CTTGCTAATCTACGGCCTCATTATTTTCATCAACATTTAAAACACTATCACACACACGGT 390
Query 650 -A-----A-C-TC-TCACCATCG-GTCCTAGGGACAGTATTCCCGAGTGCCTTGACGGTT 699
| | | || ||||||| | ||||||| |||| |||||||||||| ||||||||||
Sbjct 389 CACTTTCAGCATCGTCACCAT-GAGTCCTAGAGACATTATTCCCGAGTGTCTTGACGGTT 331
Query 700 GTAATGAAAGAGACAAACAAGGTGACACTAGGATCCCCACCACGAATCAAAAA---C-T- 754
|||||||||||||||||||| ||| | ||||| |||||||||||| ||||| | |
Sbjct 330 GTAATGAAAGAGACAAACAAATTGAGAGAAGGATACCCACCACGAATAAAAAAAATCGTA 271
Query 755 -C--A---T---TTGATTGTCAATGTATACAGGAGGGCATTTACTTTCTATCATCACTGA 805
| | | |||| |||||||||| |||||||||| |||| | |||||||||||| |
Sbjct 270 TCCCACCCTCACTTGACTGTCAATGTAGACAGGAGGGCGTTTAGTATCTATCATCACTAA 211
Query 806 CATCTTTCCCGGCATCCAGTAACTAATTATTG-GATTG 842
||||| |||||| ||||| ||||||||||| | |||||
Sbjct 210 CATCTCTCCCGGTATCCATTAACTAATTAT-GAGATTG 174
Score = 100 bits (54), Expect = 2e-20
Identities = 93/110 (85%), Gaps = 9/110 (8%)
Strand=Plus/Minus
Query 370 TGTACGTACATTGGTACAAACCATGTTGACACGTACGTCTTGGAGTCACCGTTGGTGTAC 429
|||||||||||||||||||||||||||||||| ||| |||||||||||| | ||||||||
Sbjct 842 TGTACGTACATTGGTACAAACCATGTTGACACATACTTCTTGGAGTCACAGCTGGTGTAC 783
Query 430 GGTCAACCG----AG---T-T-ATCTCCCCCACGTACACGATGACTTGTG 470
||||| ||| || | | |||||| ||| ||||||| |||||||||
Sbjct 782 GGTCACCCGGGTGAGAAATGTTATCTCCGCCAGGTACACGTTGACTTGTG 733
> AT2G17460.1 | Symbols: | transposable element gene | chr2:7582174-7583230
FORWARD LENGTH=1057
Length=1057
Score = 444 bits (240), Expect = 7e-124
Identities = 279/298 (94%), Gaps = 2/298 (1%)
Strand=Plus/Minus
Query 1 TCATACGATGTGATTTTGAAACATTCTGAATTGTTGACAACTTGAGCTGTCAAATGCCAT 60
||||||||||||||||||||| |||||||||| ||||| |||||||| |||||||| |||
Sbjct 1044 TCATACGATGTGATTTTGAAATATTCTGAATTCTTGACGACTTGAGCAGTCAAATGTCAT 985
Query 61 GGACAAGTATCATCAACGCAGACCATCTCCAATCTTGTAGGACATGACCTATGTTGCTTG 120
|||||||||||||||||||| |||||| |||||||||||||| |||||||| ||||||||
Sbjct 984 GGACAAGTATCATCAACGCATACCATCACCAATCTTGTAGGATATGACCTAGGTTGCTTG 925
Query 121 TAGC-AAAAGCATTGTTTGATTGCGAGATAAGACATTGTTTGTTGTATGACTTTTCTGTT 179
|||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 924 TAGCAAAAAG-ATTGTTTGATTGCGAGATAAGACATTGTTTGTTGTATGACTTTTCTGTT 866
Query 180 CTTAAAAACACTCTCCAATCTGTAGTGTATGTACATTGGTACAAACCATGTTGACACGTA 239
||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| ||
Sbjct 865 CTTAAAAACACTCTCCAATCTATAGTGTACGTACATTGGTACAAACCATGTTGACACATA 806
Query 240 CGTCTTGGAGTCACCGTTGGTGTACGGTCACCCGAATGAGAAATGTTATCTCCGCCAG 297
| |||||||||||| | ||||||||||||||||| ||||||||||||||||||||||
Sbjct 805 CTTCTTGGAGTCACAGCTGGTGTACGGTCACCCGGGTGAGAAATGTTATCTCCGCCAG 748
Score = 350 bits (189), Expect = 2e-95
Identities = 334/398 (84%), Gaps = 33/398 (8%)
Strand=Plus/Minus
Query 470 GATCGAGGGTACTTCCCCCCATAGATCCATCATCACCCTGATAATCATCATACCCAGCAC 529
|||||| ||||||| |||||||||||||||| |||||||||||||||||||||||| |||
Sbjct 561 GATCGATGGTACTT-CCCCCATAGATCCATCGTCACCCTGATAATCATCATACCCATCAC 503
Query 530 CATCTTCGTTGTCCTCCTCCTCTTCTTCATCCTCATCTGTTTTATCGTCTTCAA-CGTCG 588
|||||||||||| | || || | ||||||||||||||||||||||||||||||| | |||
Sbjct 502 CATCTTCGTTGT-C-CC-CC-CATCTTCATCCTCATCTGTTTTATCGTCTTCAATC-TCG 448
Query 589 TCTTGCTCATCTACGGCCTCATTATTTCCATCTACATTTGAAGCACTCCCACACACACGG 648
|||| || ||||| ||||||||||||| |||| |||||| || |||| |||||||||||
Sbjct 447 TCTTACTAATCTATGGCCTCATTATTTTCATCAACATTTAAAACACTATCACACACACGG 388
Query 649 T-A-----A-C-TC-TCACCATCG-GTCCTAGGGACAGTATTCCCGAGTGCCTTGACGGT 698
| | | | || ||||||| | ||||||| |||| |||||||||||| |||||||||
Sbjct 387 TCACTTTCAGCATCGTCACCAT-GAGTCCTAGAGACATTATTCCCGAGTGTCTTGACGGT 329
Query 699 TGTAATGAAAGAGACAAACAAGGTGACACTAGGATCCCCACCACGAATCAAAAA---C-T 754
|||||||||||||||||||||| ||| | ||||| |||||||||||| ||||| | |
Sbjct 328 TGTAATGAAAGAGACAAACAAGTTGAGAGAAGGATACCCACCACGAATAAAAAAAATCGT 269
Query 755 --C--A---T---TTGATTGTCAATGTATACAGGAGGGCATTTACTTTCTATCATCACTG 804
| | | |||| |||||||||| |||||||||| |||| | ||||||||||||
Sbjct 268 ATCCCACCCTCACTTGACTGTCAATGTAGACAGGAGGGCGTTTAGTATCTATCATCACTA 209
Query 805 ACATCTTTCCCGGCATCCAGTAACTAATTATTGGATTG 842
|||||| ||||| ||||||||||||||||| ||||||
Sbjct 208 ACATCTCTCCCGT-ATCCAGTAACTAATTATGGGATTG 172
Score = 100 bits (54), Expect = 2e-20
Identities = 93/110 (85%), Gaps = 9/110 (8%)
Strand=Plus/Minus
Query 370 TGTACGTACATTGGTACAAACCATGTTGACACGTACGTCTTGGAGTCACCGTTGGTGTAC 429
|||||||||||||||||||||||||||||||| ||| |||||||||||| | ||||||||
Sbjct 840 TGTACGTACATTGGTACAAACCATGTTGACACATACTTCTTGGAGTCACAGCTGGTGTAC 781
Query 430 GGTCAACCG----AG---T-T-ATCTCCCCCACGTACACGATGACTTGTG 470
||||| ||| || | | |||||| ||| ||||||| |||||||||
Sbjct 780 GGTCACCCGGGTGAGAAATGTTATCTCCGCCAGGTACACGCTGACTTGTG 731
> AT3G29777.1 | Symbols: | transposable element gene | chr3:11658757-11659845
REVERSE LENGTH=1089
Length=1089
Score = 438 bits (237), Expect = 3e-122
Identities = 278/298 (93%), Gaps = 2/298 (1%)
Strand=Plus/Minus
Query 1 TCATACGATGTGATTTTGAAACATTCTGAATTGTTGACAACTTGAGCTGTCAAATGCCAT 60
||||||||||||||||||||| |||||||||| ||||| |||||||| |||||||| |||
Sbjct 1046 TCATACGATGTGATTTTGAAATATTCTGAATTCTTGACGACTTGAGCAGTCAAATGTCAT 987
Query 61 GGACAAGTATCATCAACGCAGACCATCTCCAATCTTGTAGGACATGACCTATGTTGCTTG 120
|||||||||||||||||||| |||||| |||||||||||||| |||||||| ||||||||
Sbjct 986 GGACAAGTATCATCAACGCATACCATCACCAATCTTGTAGGATATGACCTAGGTTGCTTG 927
Query 121 TAGC-AAAAGCATTGTTTGATTGCGAGATAAGACATTGTTTGTTGTATGACTTTTCTGTT 179
|||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 926 TAGCAAAAAG-ATTGTTTGATTGCGAGATAAGACATTGTTTGTTGTATGACTTTTCTGTT 868
Query 180 CTTAAAAACACTCTCCAATCTGTAGTGTATGTACATTGGTACAAACCATGTTGACACGTA 239
|||||||||||||| |||||| ||||||| ||||||||||||||||||||||||||| ||
Sbjct 867 CTTAAAAACACTCTTCAATCTATAGTGTACGTACATTGGTACAAACCATGTTGACACATA 808
Query 240 CGTCTTGGAGTCACCGTTGGTGTACGGTCACCCGAATGAGAAATGTTATCTCCGCCAG 297
| |||||||||||| | ||||||||||||||||| ||||||||||||||||||||||
Sbjct 807 CTTCTTGGAGTCACAGCTGGTGTACGGTCACCCGGGTGAGAAATGTTATCTCCGCCAG 750
Score = 351 bits (190), Expect = 5e-96
Identities = 333/397 (84%), Gaps = 30/397 (8%)
Strand=Plus/Minus
Query 470 GATCGAGGGTACTTCCCCCCATAGATCCATCATCACCCTGATAATCATCATACCCAGCAC 529
|||||| ||||||| |||||||||||||||| |||||||||||||||||||||||| |||
Sbjct 564 GATCGATGGTACTT-CCCCCATAGATCCATCGTCACCCTGATAATCATCATACCCATCAC 506
Query 530 CATCTTCGTTGTCCTCCTCCTCTTCTTCATCCTCATCTGTTTTATCGTCTTCAA-CGTCG 588
|||||||||||| | || || | ||||||||||||||||||||||||||||||| | |||
Sbjct 505 CATCTTCGTTGT-C-CC-CC-CATCTTCATCCTCATCTGTTTTATCGTCTTCAATC-TCG 451
Query 589 TCTTGCTCATCTACGGCCTCATTATTTCCATCTACATTTGAAGCACTCCCACACACACGG 648
||||||| ||||| ||||||||||||| |||| |||||| || |||| |||||||||||
Sbjct 450 TCTTGCTAATCTATGGCCTCATTATTTTCATCAACATTTAAAACACTATCACACACACGG 391
Query 649 TAACTCTCACCATCG-------G--TCCTAGGGACAGTATTCCCGAGTGCCTTGACGGTT 699
| ||| ||| ||||| | |||||| |||| |||||||||||| ||||||||||
Sbjct 390 TCACTTTCAGCATCGTCACCATGACTCCTAGAGACATTATTCCCGAGTGTCTTGACGGTT 331
Query 700 GTAATGAAAGAGACAAACAAGGTGACACTAGGATCCCCACCACGAATCAAAAA---C-T- 754
||||||||||||||||||||| ||| | ||||| |||||||||||| ||||| | |
Sbjct 330 GTAATGAAAGAGACAAACAAGTTGAGAGAAGGATACCCACCACGAATAAAAAAAATCGTA 271
Query 755 -C--A---T---TTGATTGTCAATGTATACAGGAGGGCATTTACTTTCTATCATCACTGA 805
| | | |||| | |||||||| |||||||||| |||| | |||||||||||| |
Sbjct 270 TCCCACCCTCACTTGACTCTCAATGTAGACAGGAGGGCGTTTAGTATCTATCATCACTAA 211
Query 806 CATCTTTCCCGGCATCCAGTAACTAATTATTGGATTG 842
||||| |||||| ||||||||||||||||| ||||||
Sbjct 210 CATCTCTCCCGGTATCCAGTAACTAATTATGGGATTG 174
Score = 100 bits (54), Expect = 2e-20
Identities = 64/69 (93%), Gaps = 0/69 (0%)
Strand=Plus/Minus
Query 370 TGTACGTACATTGGTACAAACCATGTTGACACGTACGTCTTGGAGTCACCGTTGGTGTAC 429
|||||||||||||||||||||||||||||||| ||| |||||||||||| | ||||||||
Sbjct 842 TGTACGTACATTGGTACAAACCATGTTGACACATACTTCTTGGAGTCACAGCTGGTGTAC 783
Query 430 GGTCAACCG 438
||||| |||
Sbjct 782 GGTCACCCG 774
> AT1G30980.1 | Symbols: | transposable element gene | chr1:11049583-11050729
REVERSE LENGTH=1147
Length=1147
Score = 427 bits (231), Expect = 7e-119
Identities = 277/299 (93%), Gaps = 4/299 (1%)
Strand=Plus/Minus
Query 1 TCATACGATGTGATTTTGAAACATTCTGAATTGTTGACAACTTGAGCTGTCAAATGCCAT 60
||||||||||||||||||||| ||||| |||| ||||| |||||||| |||||||| |||
Sbjct 1106 TCATACGATGTGATTTTGAAATATTCTTAATTCTTGACGACTTGAGCAGTCAAATGTCAT 1047
Query 61 GGACAAGTATCATCAACGCAGACCATCTCCAATCTTGTAGGACATGACCTATGTTGCTTG 120
|||||||||||||||||||| |||||| |||||||||||||| |||||||| ||||||||
Sbjct 1046 GGACAAGTATCATCAACGCATACCATCACCAATCTTGTAGGATATGACCTAGGTTGCTTG 987
Query 121 TAGC-AAAAGCATTGTTTGATTGCGAGATAAGACATTGTTTGTTGTATGACTTTTCTGTT 179
|||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 986 TAGCAAAAAG-ATTGTTTGATTGCGAGATAAGACATTGTTTGTTGTATGACTTTTCTGTT 928
Query 180 CTTAAAAACACTCTCCAATCTGTAGTGTATGTACATTGGTACAAACCATGTTGACACGTA 239
||||||||||||||||||| | ||||||| ||||||||||||||||||||||||||| ||
Sbjct 927 CTTAAAAACACTCTCCAATTTATAGTGTACGTACATTGGTACAAACCATGTTGACACATA 868
Query 240 CGT-CTTGGAGTCACCGTTGGTGTACGGTCACCCGAATGAGAAATGTTATCTCCGCCAG 297
|| ||||||||||| | ||||||||||||||||| ||||||||||||||||||||||
Sbjct 867 -GTTCTTGGAGTCACAGCTGGTGTACGGTCACCCGGGTGAGAAATGTTATCTCCGCCAG 810
Score = 344 bits (186), Expect = 8e-94
Identities = 331/397 (83%), Gaps = 26/397 (7%)
Strand=Plus/Minus
Query 470 GATCGAGGGTACTTCCCCCCATAGATCCATCATCACCCTGATAATCATCATACCCAGCAC 529
|||||| ||||||| ||| |||||||||||| |||||||||||||||||||||||| |||
Sbjct 623 GATCGATGGTACTT-CCCTCATAGATCCATCGTCACCCTGATAATCATCATACCCATCAC 565
Query 530 CATCTTCGTTGTCCTCCTCCTCTTCTTCATCCTCATCTGTTTTATCGTCTTCAACGTCGT 589
|||||||||||||| || || | ||||||||||||||||||||||||||||||| |||||
Sbjct 564 CATCTTCGTTGTCCCCCCCCCCATCTTCATCCTCATCTGTTTTATCGTCTTCAATGTCGT 505
Query 590 CTTGCTCATCTACGGCCTCATTATTTCCATCTACATTTGAAGCACTCCCACACACACGGT 649
||| || ||||||||||||||||||| |||| |||||| || |||| ||||||||||||
Sbjct 504 CTTCCTAATCTACGGCCTCATTATTTTCATCAACATTTAAAACACTATCACACACACGGT 445
Query 650 -A-----A-C-TC-TCACCATCG-GTCCTAGGGACAGTATTCCCGAGTGCCTTGACGGTT 699
| | | || ||||||| | ||||||| |||| |||||| ||||| |||||| |||
Sbjct 444 CACTTTCAGCATCGTCACCAT-GAGTCCTAGAGACATTATTCCTGAGTGTCTTGACAGTT 386
Query 700 GTAATGAAAGAGACAAACAAGGTGACACTAGGATCCCCACCACGAATCAAAAAC-T---- 754
||||||| ||||||||||||| ||| | ||||| |||||||||||| ||||| |
Sbjct 385 GTAATGATAGAGACAAACAAGTTGAGAGAAGGATACCCACCACGAATAAAAAAAATTGTA 326
Query 755 -C--A---T---TTGATTGTCAATGTATACAGGAGGGCATTTACTTTCTATCATCACTGA 805
| | | |||| |||||||||| |||||||||| |||| | |||||||||||| |
Sbjct 325 TCCCACCCTCACTTGACTGTCAATGTAGACAGGAGGGCGTTTAGTATCTATCATCACTAA 266
Query 806 CATCTTTCCCGGCATCCAGTAACTAATTATTGGATTG 842
||||| || ||| ||||||||||||||||| ||||||
Sbjct 265 CATCTCTCTCGGTATCCAGTAACTAATTATGGGATTG 229
Score = 95.3 bits (51), Expect = 8e-19
Identities = 93/111 (84%), Gaps = 11/111 (10%)
Strand=Plus/Minus
Query 370 TGTACGTACATTGGTACAAACCATGTTGACACGTACGT-CTTGGAGTCACCGTTGGTGTA 428
|||||||||||||||||||||||||||||||| || || ||||||||||| | |||||||
Sbjct 902 TGTACGTACATTGGTACAAACCATGTTGACACATA-GTTCTTGGAGTCACAGCTGGTGTA 844
Query 429 CGGTCAACCG----AG---T-T-ATCTCCCCCACGTACACGATGACTTGTG 470
|||||| ||| || | | |||||| ||| ||||||| |||||||||
Sbjct 843 CGGTCACCCGGGTGAGAAATGTTATCTCCGCCAGGTACACGCTGACTTGTG 793
> AT4G04495.1 | Symbols: | transposable element gene | chr4:2236004-2237046
REVERSE LENGTH=1043
Length=1043
Score = 425 bits (230), Expect = 3e-118
Identities = 271/291 (93%), Gaps = 2/291 (1%)
Strand=Plus/Minus
Query 1 TCATACGATGTGATTTTGAAACATTCTGAATTGTTGACAACTTGAGCTGTCAAATGCCAT 60
|||||||||||||||||||||||||||||||| |||| |||||||| |||||||| |||
Sbjct 1030 TCATACGATGTGATTTTGAAACATTCTGAATTCCTGACGACTTGAGCAGTCAAATGTCAT 971
Query 61 GGACAAGTATCATCAACGCAGACCATCTCCAATCTTGTAGGACATGACCTATGTTGCTTG 120
||||| |||||||||||||| || ||||||||||||||||||||||||||| |||||||
Sbjct 970 GGACAGGTATCATCAACGCATACTATCTCCAATCTTGTAGGACATGACCTAGGTTGCTTA 911
Query 121 TAGCAAAAGCATTGTTTGATTGCGAGATAAGACATTGTTTGTTGTATGACTTTTCTGTTC 180
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 910 TAGCAAAAACATTGTTTGATTGCGAGATAAGACATTGTTTGTTGTATGACTTTTCTGTTC 851
Query 181 TTAAAAACACTC-TCCAATCTGTAGTGTATGTACATTGGTACAAACCATGTTGACACGTA 239
||||||| |||| || ||||| ||||||| ||||||||||||||||||||||||||||||
Sbjct 850 TTAAAAATACTCCTC-AATCTATAGTGTACGTACATTGGTACAAACCATGTTGACACGTA 792
Query 240 CGTCTTGGAGTCACCGTTGGTGTACGGTCACCCGAATGAGAAATGTTATCT 290
| |||||||||||| | |||||||||||||||||| |||||||||||||||
Sbjct 791 CTTCTTGGAGTCACAGCTGGTGTACGGTCACCCGAGTGAGAAATGTTATCT 741
Score = 351 bits (190), Expect = 5e-96
Identities = 334/398 (84%), Gaps = 32/398 (8%)
Strand=Plus/Minus
Query 470 GATCGAGGGTACTTCCCCCCATAGATCCATCA-TCACCCTGATAATCATCATACCCAGCA 528
|||||||||||||| | ||||||||||||| | |||||||||||||||||||||||| ||
Sbjct 547 GATCGAGGGTACTT-CTCCCATAGATCCAT-AGTCACCCTGATAATCATCATACCCATCA 490
Query 529 CCATCTTCGTTGTCCTCCTCCTCTTCTTCATCCTCATCTGTTTTATCGTCTTCAACGTCG 588
|||| |||||||| | || |||| | |||||| |||||||||||| ||||||||||||||
Sbjct 489 CCATTTTCGTTGT-C-CC-CCTCCTATTCATCTTCATCTGTTTTACCGTCTTCAACGTCG 433
Query 589 TCTTGCTCATCTACG-GCCTCATTATTTCCATCTACATTTGAAGCACTCCCACACACACG 647
||||||||||||| | |||||||||||| |||| ||||||||| |||| |||||||| |
Sbjct 432 TCTTGCTCATCTA-GCGCCTCATTATTTTCATCAACATTTGAAACACTATCACACACATG 374
Query 648 GT-A-----A-C-TC-TCACCATCG-GTCCTAGGGACAGTATTCCCGAGTGCCTTGACGG 697
|| | | | || ||||||| | ||||||| |||| |||| ||||||| ||||||||
Sbjct 373 GTCACTTTCAGCATCGTCACCAT-GAGTCCTAGAGACATTATTTCCGAGTGTCTTGACGG 315
Query 698 TTGTAATGAAAGAGACAAACAAGGTGACACTAGGATCCCCACCACGAATCAAAAA---C- 753
||||||||||||||||||||||| | | | | ||| |||||||||||||||||| |
Sbjct 314 TTGTAATGAAAGAGACAAACAAGTTAAGAAAAAGATACCCACCACGAATCAAAAAGAACG 255
Query 754 T--C-AT------TTGATTGTCAATGTATACAGGAGGGCATTTACTTTCTATCATCACTG 804
| | | |||| |||||||||| |||||||||| |||| | |||||||||||||
Sbjct 254 TATCTAACCCCACTTGACTGTCAATGTAGACAGGAGGGCGTTTAGTATCTATCATCACTG 195
Query 805 ACATCTTTCCCGGCATCCAGTAACTAATTATTGGATTG 842
|||||| |||||||||||||||||||||||| ||||||
Sbjct 194 ACATCTCTCCCGGCATCCAGTAACTAATTATGGGATTG 157
Score = 111 bits (60), Expect = 8e-24
Identities = 68/72 (94%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 370 TGTACGTACATTGGTACAAACCATGTTGACACGTACGTCTTGGAGTCACCGTTGGTGTAC 429
|||||||||||||||||||||||||||||||||||| |||||||||||| | ||||||||
Sbjct 826 TGTACGTACATTGGTACAAACCATGTTGACACGTACTTCTTGGAGTCACAGCTGGTGTAC 767
Query 430 GGTCAACCGAGT 441
||||| ||||||
Sbjct 766 GGTCACCCGAGT 755
> AT3G28800.1 | Symbols: | transposable element gene | chr3:10817053-10818113
REVERSE LENGTH=1061
Length=1061
Score = 424 bits (229), Expect = 9e-118
Identities = 275/297 (93%), Gaps = 4/297 (1%)
Strand=Plus/Minus
Query 3 ATACGATGTGATTTTGAAACATTCTGAATTGTTGACAACTTGAGCTGTCAAATGCCATGG 62
|||||||||||||||||||||||||||||| ||||| |||||||| |||||||| |||||
Sbjct 1046 ATACGATGTGATTTTGAAACATTCTGAATTCTTGACGACTTGAGCAGTCAAATGTCATGG 987
Query 63 ACAAGTATCATCAACGCAGACCATCTCCAATCTTGTAGGACATGACCTATGTTGCTTGTA 122
|||||||||||||||||| ||||||||||||||| |||||||||| ||| ||||||||||
Sbjct 986 ACAAGTATCATCAACGCATACCATCTCCAATCTTATAGGACATGATCTAGGTTGCTTGTA 927
Query 123 GC-AAAAGCATTGTTTGATTGCGAGATAAGACATTGTTTGTTGTATGACTTTTCTGTTCT 181
|| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 926 GCAAAAAG-ATTGTTTGATTGCGAGATAAGACATTGTTTGTTGTATGACTTTTCTGTTCT 868
Query 182 TAAAAACACTCTCCAATCTGTAGTGTATGTACATTGGTACAAACCATGTTGACACGTACG 241
|||||||||| |||||||| ||||||| ||||||||||||||||||||||||||| |||
Sbjct 867 TAAAAACACTTTCCAATCTATAGTGTACGTACATTGGTACAAACCATGTTGACACATACT 808
Query 242 TCTTGGAGTCACCGTTGGTGTACGGTCACCCGAA-TGAGAAATGTTATCTCCGCCAG 297
|||||||||||| | |||||||||||||||| || ||| ||| |||||||||| |||
Sbjct 807 TCTTGGAGTCACAGCTGGTGTACGGTCACCC-AAGTGAAAAAAGTTATCTCCGTCAG 752
Score = 351 bits (190), Expect = 5e-96
Identities = 335/399 (84%), Gaps = 33/399 (8%)
Strand=Plus/Minus
Query 470 GATCGAGGGTACTTCCCCCCATAGATCCATCATCACCCTGATAATCATCATACCCAGCAC 529
||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| |||
Sbjct 565 GATCGAGGGTACTTCCCTCCATAGATCCATCGTCACCCTGATAATCATCATACCCATCAC 506
Query 530 CATCTTCGTTG-TCCTCCTCCTCTTCTTCATCCTCATCTGTTTTATCGTCTTCAACGTCG 588
|||||||||| ||| ||| | ||| ||||||||||||||||||||||||||||||||||
Sbjct 505 TATCTTCGTTGTTCC-CCT-C-CTT-TTCATCCTCATCTGTTTTATCGTCTTCAACGTCG 450
Query 589 TCTTGCTCATCTACGGCCTCATTATTTCCATCTACATTTGAAGCACTCCCACACACACGG 648
||||||||||||||||||||||||||| |||| ||||||||| || | |||||||||||
Sbjct 449 TCTTGCTCATCTACGGCCTCATTATTTTCATCAACATTTGAAACATTATCACACACACGG 390
Query 649 T-A-----A-C-TC-TCACCATCG-GTCCTAGGGACAGT-ATTCCCGAGTGCCTTGACGG 697
| | | | || ||||||| | ||||||| || | | ||||||||||| ||||||||
Sbjct 389 TCACTTTCAGCATCGTCACCAT-GAGTCCTAGAGATA-TCATTCCCGAGTGTCTTGACGG 332
Query 698 TTGTAATGAAAGAGACAAACAAGGTGACACTAGGATCCCCACCACGAATCAAAAA---C- 753
||||||||||| ||||||||||| ||| | ||||| || ||||||||||||||| |
Sbjct 331 TTGTAATGAAAAAGACAAACAAGTTGAGAGAAGGATACCGACCACGAATCAAAAAGAACG 272
Query 754 T--C-AT------TTGATTGTCAATGTATACAGGAGGGCATTTACTTTCTATCATCACTG 804
| | | |||| |||||||||| | |||||||| |||| | ||||| ||||||
Sbjct 271 TATCCAACCCCACTTGACTGTCAATGTAGATAGGAGGGCGTTTAGTATCTATAATCACTA 212
Query 805 ACATCTTTCCCGGCATCCAGTAACTAATTAT-TGGATTG 842
|||||||||||| |||| ||||||||||||| || ||||
Sbjct 211 ACATCTTTCCCGACATCGAGTAACTAATTATGTG-ATTG 174
Score = 100 bits (54), Expect = 2e-20
Identities = 66/72 (92%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 370 TGTACGTACATTGGTACAAACCATGTTGACACGTACGTCTTGGAGTCACCGTTGGTGTAC 429
|||||||||||||||||||||||||||||||| ||| |||||||||||| | ||||||||
Sbjct 844 TGTACGTACATTGGTACAAACCATGTTGACACATACTTCTTGGAGTCACAGCTGGTGTAC 785
Query 430 GGTCAACCGAGT 441
||||| || |||
Sbjct 784 GGTCACCCAAGT 773
> AT5G28637.1 | Symbols: | transposable element gene | chr5:10645026-10646093
REVERSE LENGTH=1068
Length=1068
Score = 416 bits (225), Expect = 2e-115
Identities = 274/298 (92%), Gaps = 2/298 (1%)
Strand=Plus/Minus
Query 1 TCATACGATGTGATTTTGAAACATTCTGAATTGTTGACAACTTGAGCTGTCAAATGCCAT 60
||||| ||||| |||||||||||||||||||| ||||| |||||||| |||||||| |||
Sbjct 1055 TCATAGGATGTAATTTTGAAACATTCTGAATTCTTGACGACTTGAGCAGTCAAATGTCAT 996
Query 61 GGACAAGTATCATCAACGCAGACCATCTCCAATCTTGTAGGACATGACCTATGTTGCTTG 120
|||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||
Sbjct 995 GGACAAGTATCATCAACGCATACCATCTCCAATCTTGTAGGACATGACCTAGGTTGCTTG 936
Query 121 TAGCAAAAGCATTGTTTGATTGCGAGATAAGACATTGTTTGTTGTATGACTTTTCTGTTC 180
|||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 935 TAGCAAAAAAATTGTTTGATTGTGAGATAAGACATTGTTTGTTGTATGACTTTTCTGTTG 876
Query 181 TTAAAAACACTCTCC-AATCTGTAGTGTATGTACATTGGTACAAACCATGTTGACACGTA 239
||||||||||| ||| ||||| |||| |||||||||||||||||||||||||||||| ||
Sbjct 875 TTAAAAACACT-TCCCAATCTATAGTATATGTACATTGGTACAAACCATGTTGACACATA 817
Query 240 CGTCTTGGAGTCACCGTTGGTGTACGGTCACCCGAATGAGAAATGTTATCTCCGCCAG 297
| ||||||||| || | |||||||||||||||||| |||||||| ||||||||| |||
Sbjct 816 CTTCTTGGAGTTACAGCTGGTGTACGGTCACCCGAGTGAGAAATATTATCTCCGTCAG 759
Score = 326 bits (176), Expect = 3e-88
Identities = 319/383 (83%), Gaps = 29/383 (8%)
Strand=Plus/Minus
Query 484 CCCCCCATAGATCCATCATCACCCTGATAATCATCATACCCAGCACCATCTTCGTTGTCC 543
||||||||||||||||| | |||||||||||||||||||||| |||| ||||| |||| |
Sbjct 551 CCCCCCATAGATCCATCGTTACCCTGATAATCATCATACCCATCACCGTCTTCATTGT-C 493
Query 544 TCCTCCTCTTCTTCATCCTCATCTGTTTTATCGTCTTCAACGTCGTCTTGCTCATCTACG 603
|| |||| |||||||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct 492 -CC-CCTCCTCTTCATCCTCATCTGTTTTATCGTCTTCAACGTCGTCTTCCTCATCTATG 435
Query 604 GCCTCATTATTTCCATCTA-CATTTGAAGCACTCCCACACACACGGT-A-----A-C-TC 654
|||||||||||| ||| || ||||||||||||| |||||||||||| | | | ||
Sbjct 434 GCCTCATTATTTTCAT-TAACATTTGAAGCACTATCACACACACGGTCACTTTCAGCATC 376
Query 655 -TCACCATCG-GTCCTAGGGACAGTATTCCCGAGTGCCTTGACGGTTGTAATGAAAGAGA 712
||||||| | ||||||| |||| |||||||||||| |||||||||||||||||||||||
Sbjct 375 GTCACCAT-GAGTCCTAGAGACATTATTCCCGAGTGTCTTGACGGTTGTAATGAAAGAGA 317
Query 713 CAAACAAGGTGACACTAGGATCCCCACCACGAATCAAAAA---C-T--C-A-T-----TT 759
|||||||| ||| | ||||| || ||||||||||||||| | | | | | ||
Sbjct 316 CAAACAAGTTGAGAGAAGGATACCGACCACGAATCAAAAAGAACGTATCCAATCCCACTT 257
Query 760 GATTGTCAATGTATACAGGAGGGCATTTACTTTCTATCATCACTGACATCTTTCCCGGCA 819
|| | |||||| | ||| |||||| || | | |||||||| ||| |||||| ||||| ||
Sbjct 256 GACTATCAATGAAGACAAGAGGGCGTTGAGTATCTATCATGACTAACATCTCTCCCGACA 197
Query 820 TCCAGTAACTAATTATTGGATTG 842
|| ||||||||||||| ||||||
Sbjct 196 TCTAGTAACTAATTATGGGATTG 174
> AT3G59860.1 | Symbols: | transposable element gene | chr3:22113851-22114908
REVERSE LENGTH=1058
Length=1058
Score = 416 bits (225), Expect = 2e-115
Identities = 273/297 (92%), Gaps = 0/297 (0%)
Strand=Plus/Minus
Query 1 TCATACGATGTGATTTTGAAACATTCTGAATTGTTGACAACTTGAGCTGTCAAATGCCAT 60
|||||||||||||||||||||||||||||||| ||||| |||||||| |||||||| |||
Sbjct 1045 TCATACGATGTGATTTTGAAACATTCTGAATTCTTGACGACTTGAGCAGTCAAATGTCAT 986
Query 61 GGACAAGTATCATCAACGCAGACCATCTCCAATCTTGTAGGACATGACCTATGTTGCTTG 120
||||||||||||||||||| | |||| |||||||||||||| |||||||| |||||||
Sbjct 985 AGACAAGTATCATCAACGCATATCATCACCAATCTTGTAGGATATGACCTAGGTTGCTTA 926
Query 121 TAGCAAAAGCATTGTTTGATTGCGAGATAAGACATTGTTTGTTGTATGACTTTTCTGTTC 180
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 925 TAGCAAAAAAATTGTTTGATTGCGAGATAAGACATTGTTTGTTGTATGACTTTTCTGTTC 866
Query 181 TTAAAAACACTCTCCAATCTGTAGTGTATGTACATTGGTACAAACCATGTTGACACGTAC 240
|||||||||||||||||||| || |||| |||||||||||||||||||||||||| |||
Sbjct 865 TTAAAAACACTCTCCAATCTATATTGTACGTACATTGGTACAAACCATGTTGACAAATAC 806
Query 241 GTCTTGGAGTCACCGTTGGTGTACGGTCACCCGAATGAGAAATGTTATCTCCGCCAG 297
|||||||||||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct 805 TTCTTGGAGTCACAACTGGTGTACGGTCACCCGGGTGAGAAATGTTATCTCCGCCAG 749
Score = 322 bits (174), Expect = 4e-87
Identities = 328/397 (83%), Gaps = 32/397 (8%)
Strand=Plus/Minus
Query 470 GATCGAGGGTACTTCCCCCCATAGATCCATCATCACCCTGATAATCATCATACCCAGCAC 529
|||||| ||||||| |||||||||||||||| |||||||||||||||||||||||| |||
Sbjct 562 GATCGATGGTACTT-CCCCCATAGATCCATCGTCACCCTGATAATCATCATACCCATCAC 504
Query 530 CATCTTCGTTGTCCTCCTCCTCTTCTTCATCCTCATCTGTTTTATCGTCTTCAACGTCGT 589
||||||||||| |||| ||| ||||||||||||||||||||||||||||||| |||||
Sbjct 503 CATCTTCGTTG---TCCT-CTCATCTTCATCCTCATCTGTTTTATCGTCTTCAATGTCGT 448
Query 590 CTTGCTCATCTACGGCCTCATTATTTCCATCTACATTTGAAGCACTCCCACACACACGGT 649
|||||| |||||||| |||||||||| |||| ||||| || |||| ||||||||| ||
Sbjct 447 CTTGCTAATCTACGGTCTCATTATTTTCATCAACATTAAAA-CACTATCACACACACAGT 389
Query 650 -A-----A-C-TC-TCACCATCG-GTCCTAGGGACAGTATTCCCGAGTGCCTTGACGGTT 699
| | | || ||||||| | ||||||| |||| |||| ||||||| |||||||||
Sbjct 388 CACTTTCAGCATCGTCACCAT-GAGTCCTAGAGACATTATTTCCGAGTGTATTGACGGTT 330
Query 700 GTAATGAAAGAGACAAACAAGGTGACACTAGGATCCCCACCACGAATCAAAAA---C-T- 754
||||||||||||||||||||| ||| | ||||| |||||||||||| ||||| | |
Sbjct 329 GTAATGAAAGAGACAAACAAGTTGAGAGAAGGATACCCACCACGAATAAAAAAAATCGTA 270
Query 755 -C--A---T---TTGATTGTCAATGTATACAGGAGGGCATTTACTTTCTATCATCACTGA 805
| | | |||| |||||||||| |||||||||| |||| | |||| ||| ||| |
Sbjct 269 TCCCACCCTCACTTGACTGTCAATGTAGACAGGAGGGCGTTTAGTATCTA-CATAACTAA 211
Query 806 CATCTTTCCCGGCATCCAGTAACTAATTATTGGATTG 842
|||| |||||| |||||||||||||| || ||||||
Sbjct 210 CATCACTCCCGGTATCCAGTAACTAATCATGGGATTG 174
Score = 89.8 bits (48), Expect = 4e-17
Identities = 62/69 (90%), Gaps = 0/69 (0%)
Strand=Plus/Minus
Query 370 TGTACGTACATTGGTACAAACCATGTTGACACGTACGTCTTGGAGTCACCGTTGGTGTAC 429
||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||
Sbjct 841 TGTACGTACATTGGTACAAACCATGTTGACAAATACTTCTTGGAGTCACAACTGGTGTAC 782
Query 430 GGTCAACCG 438
||||| |||
Sbjct 781 GGTCACCCG 773
> AT1G55400.1 | Symbols: | transposable element gene | chr1:20684233-20684965
REVERSE LENGTH=733
Length=733
Score = 379 bits (205), Expect = 2e-104
Identities = 330/387 (85%), Gaps = 21/387 (5%)
Strand=Plus/Minus
Query 470 GATCGAGGGTACTTCCCCCCATAGATCCATCATCACCCTGATAATCATCATACCCAGCAC 529
||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||
Sbjct 553 GATCGAGGGTACTTCCCCCCATAGATCCATCGTCACCCTGATAATCATCATACCCATCAC 494
Query 530 CATCTTCGTTGTCCTCCTCCTCTTCTTCATCCTCATCTGTTTTATCGTCTTCAACGTCGT 589
|||||||||||| | || |||| |||||||||||||||||||||||||||||||| ||||
Sbjct 493 CATCTTCGTTGT-C-CC-CCTCCTCTTCATCCTCATCTGTTTTATCGTCTTCAACATCGT 437
Query 590 CTTGCTCATCTACGGCCTCATTATTTCCATCTACATTTGAAGCACTCCCACACACACGGT 649
|||||||||||||||||||||||||| |||| ||||||||| ||| ||| || |
Sbjct 436 CTTGCTCATCTACGGCCTCATTATTTTCATCAACATTTGAAACACGGTCACTTTCA-GC- 379
Query 650 AACTCTCACCATCG-GTCCTAGGGACAGTATTCCCGAGTGCCTTGACGGTTGTAATGAAA 708
| | ||||||| | ||||||| |||| ||||| |||||| |||||||||||||||||||
Sbjct 378 ATCG-TCACCAT-GAGTCCTAGAGACATTATTCTCGAGTGTCTTGACGGTTGTAATGAAA 321
Query 709 GAGACAAACAAGGTGACACTAGGATCCCCACCACGAATCA-AAA-A-C-T---CAT---- 757
|||||||||||| ||| | ||||| || ||||||||||| ||| | | | ||
Sbjct 320 GAGACAAACAAGTTGAGAGAAGGATACCTACCACGAATCATAAAGAACGTATTCAACCCC 261
Query 758 --TTGATTGTCAATGTATACAGGAGGGCATTTACTTTCTATCATCACTGACATCTTTCCC 815
|||| |||||||||| |||||| ||| |||| | |||||||||||| |||||| ||||
Sbjct 260 ACTTGACTGTCAATGTAGACAGGAAGGCGTTTAGTATCTATCATCACTAACATCTCTCCC 201
Query 816 GGCATCCAGTAACTAATTATTGGATTG 842
|||||||||||||||||||| ||||||
Sbjct 200 GGCATCCAGTAACTAATTATGGGATTG 174
> AT5G03950.1 | Symbols: | transposable element gene | chr5:1066206-1066964
FORWARD LENGTH=759
Length=759
Score = 374 bits (202), Expect = 1e-102
Identities = 335/395 (85%), Gaps = 25/395 (6%)
Strand=Plus/Minus
Query 470 GATCGAGGGTACTTCCCCCCATAGATCCATCATCACCCTGATAATCATCATACCCAGCAC 529
||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| |||
Sbjct 487 GATCGAGGGTACTTCCCCCTATAGATCCATCGTCACCCTGATAATCATCATACCCACCAC 428
Query 530 CATCTTCGTTGTCCTCCTCCTCTTCTTCATCCTCATCTGTTTTATCGTCTTCAACGTCGT 589
|| |||||||||| |||||||||| |||||||| |||||||||||||||| ||||||
Sbjct 427 GATATTCGTTGTCCCCCTCCTCTTC---ATCCTCATTTGTTTTATCGTCTTCATCGTCGT 371
Query 590 CTTGCTCATCTACGGCCTCATTATTTCCATCTACATTTGAAGCACTCCCACACACACGGT 649
|||||||||||||||||||||||||| |||| ||||||||| |||| |||| |||||||
Sbjct 370 CTTGCTCATCTACGGCCTCATTATTTTCATCAACATTTGAAACACTATCACATACACGGT 311
Query 650 AACTCTCA-C--CATC-----G-GTCCTAGGGACAGTATTCCCGAGTGCCTTGACGGTTG 700
|||| ||| | |||| | ||||||| |||| ||||| |||||| |||||||||||
Sbjct 310 AACTTTCAGCATCATCACCATGAGTCCTAGAGACATTATTCTCGAGTGTCTTGACGGTTG 251
Query 701 TAATGAAAGAGACAAACAAGGTGACACTAGGATCCCCACCACGAATCAAAAA---C-T-- 754
|||||||||||||||||||| ||| | ||||| || ||||||||| ||||| | |
Sbjct 250 TAATGAAAGAGACAAACAAGTTGAGAGAAGGATACCGACCACGAATTAAAAAGAACGTAT 191
Query 755 C-AT------TTGATTGTCAATGTATACAGGAGGGCATTTACTTTCTATCATCACTGACA 807
| | |||| |||||||||| |||||||||| |||| | |||||||||||| |||
Sbjct 190 CCAACCCCACTTGACTGTCAATGTAGACAGGAGGGCGTTTAGTATCTATCATCACTAACA 131
Query 808 TCTTTCCCGGCATCCAGTAACTAATTATTGGATTG 842
||| |||||||||||||||||||||||| ||||||
Sbjct 130 TCTCTCCCGGCATCCAGTAACTAATTATGGGATTG 96
> AT5G44313.1 | Symbols: | transposable element gene | chr5:17851014-17851727
FORWARD LENGTH=714
Length=714
Score = 374 bits (202), Expect = 1e-102
Identities = 329/387 (85%), Gaps = 21/387 (5%)
Strand=Plus/Minus
Query 470 GATCGAGGGTACTTCCCCCCATAGATCCATCATCACCCTGATAATCATCATACCCAGCAC 529
||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||
Sbjct 442 GATCGAGGGTACTTCCCCCCATAGATCCATCGTCACCCTGATAATCATCATACCCATCAC 383
Query 530 CATCTTCGTTGTCCTCCTCCTCTTCTTCATCCTCATCTGTTTTATCGTCTTCAACGTCGT 589
|||||||||||| | || |||| |||||||||||||||||||||||||||||||||||||
Sbjct 382 CATCTTCGTTGT-C-CC-CCTCCTCTTCATCCTCATCTGTTTTATCGTCTTCAACGTCGT 326
Query 590 CTTGCTCATCTACGGCCTCATTATTTCCATCTACATTTGAAGCACTCCCACACACACGGT 649
|||||||||||||||||||||||||| |||| ||||||||| ||| ||| || |
Sbjct 325 CTTGCTCATCTACGGCCTCATTATTTTCATCAACATTTGAAACACGGTCACTTTCA-GC- 268
Query 650 AACTCTCACCATCG-GTCCTAGGGACAGTATTCCCGAGTGCCTTGACGGTTGTAATGAAA 708
| | ||| ||| | | ||||| |||| |||||| ||||| |||||||||||||||||||
Sbjct 267 ATCA-TCATCAT-GAGCCCTAGAGACATTATTCCTGAGTGTCTTGACGGTTGTAATGAAA 210
Query 709 GAGACAAACAAGGTGACACTAGGATCCCCACCACGAATCA-AAA-A-C-T---CA--T-- 757
|||||||||||| ||| | ||||| || ||||||||||| ||| | | | || |
Sbjct 209 GAGACAAACAAGTTGAGAGAAGGATACCTACCACGAATCATAAAGAACGTATTCAACTCC 150
Query 758 --TTGATTGTCAATGTATACAGGAGGGCATTTACTTTCTATCATCACTGACATCTTTCCC 815
|||| |||||||||| |||||||||| |||| | |||||||||||| |||||| ||
Sbjct 149 ACTTGACTGTCAATGTAGACAGGAGGGCGTTTAGTATCTATCATCACTAACATCTCTCTG 90
Query 816 GGCATCCAGTAACTAATTATTGGATTG 842
|||||||||||||||||||| ||||||
Sbjct 89 GGCATCCAGTAACTAATTATGGGATTG 63
> AT5G27590.1 | Symbols: | transposable element gene | chr5:9738492-9740473
REVERSE LENGTH=963
Length=963
Score = 363 bits (196), Expect = 2e-99
Identities = 328/388 (85%), Gaps = 23/388 (6%)
Strand=Plus/Minus
Query 470 GATCGAGGGTACTTCCCCCCATAGATCCATCATCACCCTGATAATCATCATACCCAGCAC 529
||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||
Sbjct 553 GATCGAGGGTACTTCCCCCCATAGATCCATCGTCACCCTGATAATCATCATACCCATCAC 494
Query 530 CATCTTCGTTGTCCTCC-TCCTCTTCTTCATCCTCATCTGTTTTATCGTCTTCAACGTCG 588
|||||||||| ||| || | | ||| ||||||||||||||||||||||||||||||||||
Sbjct 493 CATCTTCGTTATCC-CCAT-C-CTT-TTCATCCTCATCTGTTTTATCGTCTTCAACGTCG 438
Query 589 TCTTGCTCATCTACGGCCTCATTATTTCCATCTACATTTGAAGCACTCCCACACACACGG 648
|||||||||| |||||||||||||||| |||| ||||||||| ||| ||| || |
Sbjct 437 TCTTGCTCATATACGGCCTCATTATTTTCATCAACATTTGAAACACGGTCACTTTCA-GC 379
Query 649 TAACTCTCACCATCG-GTCCTAGGGACAGTATTCCCGAGTGCCTTGACGGTTGTAATGAA 707
| | ||||||| | ||||||| |||| ||||| ||||| ||||||||||||||| ||
Sbjct 378 -ATCG-TCACCAT-GAGTCCTAGAGACATTATTCTTGAGTGTCTTGACGGTTGTAATAAA 322
Query 708 AGAGACAAACAAGGTGACACTAGGATCCCCACCACGAATCA-AAA-A-C-T---CAT--- 757
||||||||||||| ||| | ||||| || ||||||||||| ||| | | | ||
Sbjct 321 AGAGACAAACAAGTTGAGAGAAGGATACCTACCACGAATCATAAAGAACGTATTCAACCC 262
Query 758 ---TTGATTGTCAATGTATACAGGAGGGCATTTACTTTCTATCATCACTGACATCTTTCC 814
|||| |||||||||| |||||||||| |||| | |||||||||||| |||||| |||
Sbjct 261 CACTTGACTGTCAATGTAGACAGGAGGGCGTTTAGTATCTATCATCACTAACATCTCTCC 202
Query 815 CGGCATCCAGTAACTAATTATTGGATTG 842
||||||||||||||||||||| ||||||
Sbjct 201 CGGCATCCAGTAACTAATTATGGGATTG 174
> AT1G17900.1 | Symbols: | transposable element gene | chr1:6157368-6158130
REVERSE LENGTH=763
Length=763
Score = 363 bits (196), Expect = 2e-99
Identities = 327/387 (84%), Gaps = 21/387 (5%)
Strand=Plus/Minus
Query 470 GATCGAGGGTACTTCCCCCCATAGATCCATCATCACCCTGATAATCATCATACCCAGCAC 529
|||||||||||||||||||||||||| |||| |||||||||||||||||||||||| |||
Sbjct 554 GATCGAGGGTACTTCCCCCCATAGATTCATCGTCACCCTGATAATCATCATACCCATCAC 495
Query 530 CATCTTCGTTGTCCTCCTCCTCTTCTTCATCCTCATCTGTTTTATCGTCTTCAACGTCGT 589
|||||||||||||| ||| | ||| ||||||||||||||||||||||||||||| || ||
Sbjct 494 CATCTTCGTTGTCCCCCT-C-CTT-TTCATCCTCATCTGTTTTATCGTCTTCAATGTTGT 438
Query 590 CTTGCTCATCTACGGCCTCATTATTTCCATCTACATTTGAAGCACTCCCACACACACGGT 649
|||||||||||||||||||||||||| |||| ||||||||| ||| ||| || |
Sbjct 437 CTTGCTCATCTACGGCCTCATTATTTTCATCAACATTTGAAACACGGTCACTTTCA-GC- 380
Query 650 AACTCTCACCATCG-GTCCTAGGGACAGTATTCCCGAGTGCCTTGACGGTTGTAATGAAA 708
| | ||||||| | ||||||| |||| |||| ||||||| |||||||||||||||||||
Sbjct 379 ATCG-TCACCAT-GAGTCCTAGAGACATTATTTCCGAGTGTCTTGACGGTTGTAATGAAA 322
Query 709 GAGACAAACAAGGTGACACTAGGATCCCCACCACGAATCAAAAA---C-T---CAT---- 757
|||||||||||| ||| | ||||| || ||||||||| ||||| | | ||
Sbjct 321 GAGACAAACAAGTTGAGAGAAGGATACCTACCACGAATTAAAAAGAACGTATTCAACCCC 262
Query 758 --TTGATTGTCAATGTATACAGGAGGGCATTTACTTTCTATCATCACTGACATCTTTCCC 815
|||| |||||||||| |||||||||| |||| | |||||||||||| |||||| ||||
Sbjct 261 ACTTGACTGTCAATGTAGACAGGAGGGCGTTTAGTATCTATCATCACTAACATCTCTCCC 202
Query 816 GGCATCCAGTAACTAATTATTGGATTG 842
|| ||||||||||||||||| ||||||
Sbjct 201 GGAATCCAGTAACTAATTATGGGATTG 175
> AT5G40110.1 | Symbols: | transposable element gene | chr5:16049934-16050776
FORWARD LENGTH=843
Length=843
Score = 346 bits (187), Expect = 2e-94
Identities = 331/396 (84%), Gaps = 27/396 (7%)
Strand=Plus/Minus
Query 470 GATCGAGGGTACTTCCCCCCATAGATCCATCATCACCCTGATAATCATCATACCCAGCAC 529
||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| |||
Sbjct 487 GATCGAGGGTACTTCCCCCTATAGATCCATCGTCACCCTGATAATCATCATACCCACCAC 428
Query 530 CATCTTCGTTGTCCTCCTCCTCTTCTTCATCCTCATCTGTTTTATCGTCTTCAACGTCGT 589
|||||| ||||| | || |||| ||||||||||||| |||||||||||||||| ||||||
Sbjct 427 CATCTTTGTTGT-C-CC-CCTCCTCTTCATCCTCATTTGTTTTATCGTCTTCATCGTCGT 371
Query 590 CTTGCTCATCTACGGCCTCATTATTTCCATCTACATTTGAAGCACTCCCACACACACGGT 649
||| |||||||||||||||||||||| |||| ||||||||| |||| |||| |||||||
Sbjct 370 CTTTCTCATCTACGGCCTCATTATTTTCATCAACATTTGAAACACTATCACATACACGGT 311
Query 650 -A-----A-C-TC-TCACCATCG-GTCCTAGGGACAGTATTCCCGAGTGCCTTGACGGTT 699
| | | || ||||||| | ||||||| |||| |||| || ||| ||||||||||
Sbjct 310 CACTTTCAGCATCATCACCAT-GAGTCCTAGAGACATTATTATCGGGTGTCTTGACGGTT 252
Query 700 GTAATGAAAGAGACAAACAAGGTGACACTAGGATCCCCACCACGAATCAAAAA---C-T- 754
|||||||||||||||||||| ||| | ||||| || ||||||||| ||||| | |
Sbjct 251 GTAATGAAAGAGACAAACAAATTGAGAGAAGGATACCGACCACGAATTAAAAAGAACGTA 192
Query 755 -C-AT------TTGATTGTCAATGTATACAGGAGGGCATTTACTTTCTATCATCACTGAC 806
| | |||| |||||||||| |||||||||| |||| | ||||||| |||| ||
Sbjct 191 TCCAACCCCACTTGACTGTCAATGTAGACAGGAGGGCGTTTAGTATCTATCAGCACTAAC 132
Query 807 ATCTTTCCCGGCATCCAGTAACTAATTATTGGATTG 842
|||| |||||||||||||||||||||||| ||||||
Sbjct 131 ATCTCTCCCGGCATCCAGTAACTAATTATGGGATTG 96
> AT1G32505.1 | Symbols: | transposable element gene | chr1:11753254-11754123
FORWARD LENGTH=870
Length=870
Score = 340 bits (184), Expect = 1e-92
Identities = 226/246 (92%), Gaps = 4/246 (2%)
Strand=Plus/Minus
Query 54 ATGCCATGGACAAGTATCATCAACGCAGACCATCTCCAATCTTGTAGGACATGACCTATG 113
||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
Sbjct 870 ATGTCATGGACAAGTATCATCAACGCAAACCATCTCCAATCTTGTAGGACATGACCTAGG 811
Query 114 TTGCTTGTAGC-AAAAGCATTGTTTGATTGCGAGATAAGACATTGTTTGTTGTATGACTT 172
||||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||
Sbjct 810 TTGCTTGTAGCAAAAAG-ATTGTTTGATTGCAAGATAAGACATTGTTTGTTGTATGACTT 752
Query 173 TTCTGTTCTTAAAAACACTCTCC-AATCTGTAGTGTATGTACATTGGTACAAACCATGTT 231
||||||| ||||||||||| ||| ||||| ||||||| ||||| ||||||||||||||||
Sbjct 751 TTCTGTTTTTAAAAACACT-TCCCAATCTATAGTGTACGTACAATGGTACAAACCATGTT 693
Query 232 GACACGTACGTCTTGGAGTCACCGTTGGTGTACGGTCACCCGAATGAGAAATGTTATCTC 291
||||| ||| |||||||||||| ||||||| |||||||||| |||||||||||||||
Sbjct 692 GACACATACTTCTTGGAGTCACAACTGGTGTATGGTCACCCGAGTGAGAAATGTTATCTT 633
Query 292 CGCCAG 297
||||||
Sbjct 632 CGCCAG 627
Score = 294 bits (159), Expect = 8e-79
Identities = 315/387 (81%), Gaps = 23/387 (6%)
Strand=Plus/Minus
Query 470 GATCGAGGGTACTTCCCCCCATAGATCCATCATCACCCTGATAATCATCATACCCAGCAC 529
|||||||||||||| |||||||||||||||| |||||||||||||||||||||||| |||
Sbjct 440 GATCGAGGGTACTTTCCCCCATAGATCCATCGTCACCCTGATAATCATCATACCCATCAC 381
Query 530 CATCTTCGTTGTCCTCCTCCTCTTCTTCATCCTCATCTGTTTTATCGTCTTCAACGTCGT 589
|||||| ||||| | || |||| |||||||||||||||||||||||||||||||||||||
Sbjct 380 CATCTTTGTTGT-C-CC-CCTCCTCTTCATCCTCATCTGTTTTATCGTCTTCAACGTCGT 324
Query 590 CTTGCTCATCTACGGCCTCATTATTTCCATCTACATTTGAAGCACTCCCACACACACGGT 649
||||||||||||||| |||||||||| |||| ||||||||| |||| ||||||||||||
Sbjct 323 CTTGCTCATCTACGGTCTCATTATTTTCATCAACATTTGAAACACTATCACACACACGGT 264
Query 650 -A-----A-C-TC-TCACCATCG-GTCCTAGGGACAGTATTCCCGAGTGCCTTGACGGTT 699
| | | || ||||||| | |||||| |||| |||||||||||| ||||||||
Sbjct 263 CACTTTCAGCATCGTCACCAT-GAGTCCTAAAGACATTATTCCCGAGTGTCTTGACGGAC 205
Query 700 GTA-ATGAAAGAGACAAACA-AGGTGACACTAGGA-TCCCCACCA-CGAATCAAAAACTC 755
| | | |||| || | | ||| | | || || | | || ||| || | |
Sbjct 204 AAACAAGTT-GAGAGAAGGATACC-GAC-C-ACGAATCAAAAAGAACGTATCCAACCC-C 150
Query 756 ATTTGATTGTCAATGTATACAGGAGGGCATTTACTTTCTATCATCACTGACATCTTTCCC 815
| |||| |||||||||| |||||| | | |||| | |||||||||||| |||||| |||
Sbjct 149 ACTTGACTGTCAATGTAGACAGGAAGACGTTTAGTATCTATCATCACTAACATCTCTCCT 90
Query 816 GGCATCCAGTAACTAATTATTGGATTG 842
|||||||||||||||||||| ||||||
Sbjct 89 GGCATCCAGTAACTAATTATGGGATTG 63
> AT3G45120.1 | Symbols: | transposable element gene | chr3:16511730-16512050
REVERSE LENGTH=321
Length=321
Score = 248 bits (134), Expect = 6e-65
Identities = 264/322 (82%), Gaps = 27/322 (8%)
Strand=Plus/Minus
Query 510 ATAATCATCATACCCAGCACCATCTTCGTTGTCCTCCTCCTCTTCTTCATCCTCATCTGT 569
|||| ||||||||||| ||||||||||||||| | || |||| |||||||||||||||||
Sbjct 318 ATAAGCATCATACCCATCACCATCTTCGTTGT-C-CC-CCTCCTCTTCATCCTCATCTGT 262
Query 570 TTTATCGTCTTCAACGTCGTCTTGCTCATCTACGGCCTCATTATTTCCATCTACATTTGA 629
|||||||||||||||||||||||||||||||||| ||||||||||| |||| ||||||||
Sbjct 261 TTTATCGTCTTCAACGTCGTCTTGCTCATCTACGACCTCATTATTTTCATCAACATTTGA 202
Query 630 AGCACTCCCACACACACGGT-A-----A-C-TC-TCACCATCG-GTCCTAGGGACAGTAT 679
| |||| ||||||||| || | | | || ||||||| | || |||| |||| |||
Sbjct 201 AACACTATCACACACACAGTCACTTTCAGCATCGTCACCAT-GAGTTCTAGAGACATTAT 143
Query 680 TCCCGAGTGCCTTGACGGTTGTAATGAAAGAGACAAACAAGGTGACACTAGGATCCCCAC 739
| ||||||| ||||||||||||||| ||||||||||||||| ||| | ||||| | ||
Sbjct 142 TTCCGAGTGTCTTGACGGTTGTAATAAAAGAGACAAACAAGTTGAGAGAAGGATACTGAC 83
Query 740 CACGAATCAAAAA---C-T---CAT------TTGATTGTCAATGTATACAGGAGGGCATT 786
||||||| ||||| | | || |||| |||||||||| |||||||||| ||
Sbjct 82 CACGAATAAAAAAGAACGTATTCAACCCCACTTGACTGTCAATGTAGACAGGAGGGCGTT 23
Query 787 TACTTTCTATCATCACTGACAT 808
|| | |||||||||||| ||||
Sbjct 22 TAGTATCTATCATCACTAACAT 1
> AT4G05584.1 | Symbols: | transposable element gene | chr4:2864901-2865581
FORWARD LENGTH=681
Length=681
Score = 217 bits (117), Expect = 2e-55
Identities = 168/191 (88%), Gaps = 9/191 (5%)
Strand=Plus/Minus
Query 1 TCATACGATGTGATTTTGAAACATTCTGAATTGTTGACAACTTGAGCTGTCAAATGCCAT 60
|||||| |||||||||||||||||||||| || ||||| |||||||| |||||||| ||
Sbjct 345 TCATACTATGTGATTTTGAAACATTCTGAGTTCTTGACGACTTGAGCAGTCAAATGTAAT 286
Query 61 GGACAAGTATCATCAACGCAGACCATCTCCAATCTTGTAGGACATGACCTATGTTGCTTG 120
|||||||||||||||| ||| || ||||||||||||||||| ||||| | |||
Sbjct 285 GGACAAGTATCATCAATGCAAACTATCTCCAATCTTGTAGGCCATGA-C-------CTTA 234
Query 121 TAGCAAAAGCATTGTTTGATTGCGAGAT-AAGACATTGTTTGTTGTATGACTTTTCTGTT 179
||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 233 TAGCAAAAGTATTGTTTGATTGCGAGATAAAGACATTGTTTGTTGTATGACTTTTCTGTT 174
Query 180 CTTAAAAACAC 190
|||| ||||||
Sbjct 173 CTTAGAAACAC 163
> AT2G16820.1 | Symbols: | transposable element gene | chr2:7290104-7290952
REVERSE LENGTH=606
Length=606
Score = 174 bits (94), Expect = 1e-42
Identities = 114/123 (93%), Gaps = 3/123 (2%)
Strand=Plus/Minus
Query 470 GATCGAGGGTACTTCCCCCCATAGATCCATCATCACCCTGATAATCATCATACCCAGCAC 529
|||||| || ||||| ||||||||||||||| |||||||||||||||||||||||| |||
Sbjct 330 GATCGAAGGCACTTCTCCCCATAGATCCATCGTCACCCTGATAATCATCATACCCATCAC 271
Query 530 CATCTTCGTTGTCCTCCTCCTCTTCTTCATCCTCATCTGTTTTATCGTCTTCAACGTCGT 589
|||||||||||| | || |||| |||||||||||||||||||||||||||||||||||||
Sbjct 270 CATCTTCGTTGT-C-CC-CCTCCTCTTCATCCTCATCTGTTTTATCGTCTTCAACGTCGT 214
Query 590 CTT 592
|||
Sbjct 213 CTT 211
> AT4G05583.2 | Symbols: | transposable element gene | chr4:2860476-2861486
FORWARD LENGTH=1011
Length=1011
Score = 130 bits (70), Expect = 2e-29
Identities = 78/82 (95%), Gaps = 0/82 (0%)
Strand=Plus/Minus
Query 109 CTATGTTGCTTGTAGCAAAAGCATTGTTTGATTGCGAGATAAGACATTGTTTGTTGTATG 168
||| ||||||| |||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 244 CTAGGTTGCTTATAGCAAAAGCATTGTTTGATTGCGAGATAAAACATTGTTTGTTGTATG 185
Query 169 ACTTTTCTGTTCTTAAAAACAC 190
||||||||||||||| ||||||
Sbjct 184 ACTTTTCTGTTCTTAGAAACAC 163
> AT3G42626.1 | Symbols: | transposable element gene | chr3:14717888-14720449
REVERSE LENGTH=2562
Length=2562
Score = 80.5 bits (43), Expect = 2e-14
Identities = 85/105 (81%), Gaps = 4/105 (4%)
Strand=Plus/Minus
Query 335 ACCTTCGCAGCCTGTATCTTGTACACATTCTGTTATGTACGTACATTGGTACAAACCATG 394
||||||||| | ||| || | | |||| || | ||||||||||||||||||||||||||
Sbjct 656 ACCTTCGCATCTTGTCTCCTCTGCACAGACTCTAATGTACGTACATTGGTACAAACCATG 597
Query 395 TTGACACGTACGTCT-TGGAGTCACCG-TTGGTGTACGGTCAACC 437
||||||||| || ||||| || | ||||||||| |||||||
Sbjct 596 TTGACACGT-CGGGGATGGAG-CAGAGATTGGTGTACTGTCAACC 554
Score = 60.2 bits (32), Expect = 3e-08
Identities = 56/67 (84%), Gaps = 4/67 (6%)
Strand=Plus/Minus
Query 205 TGTATGTACATTGGTACAAACCATGTTGACACGTACGTCT-TGGAGTCACCG-TTGGTGT 262
|||| ||||||||||||||||||||||||||||| || ||||| || | |||||||
Sbjct 621 TGTACGTACATTGGTACAAACCATGTTGACACGT-CGGGGATGGAG-CAGAGATTGGTGT 564
Query 263 ACGGTCA 269
|| ||||
Sbjct 563 ACTGTCA 557
> AT2G06600.1 | Symbols: | transposable element gene | chr2:2639598-2642549
FORWARD LENGTH=2952
Length=2952
Score = 80.5 bits (43), Expect = 2e-14
Identities = 86/106 (81%), Gaps = 6/106 (6%)
Strand=Plus/Minus
Query 335 ACCTTCGCAGCCTGTATCTTGTACACATTCTGTTA-TGTACGTACATTGGTACAAACCAT 393
||||||||| | ||| |||| | |||| || || ||||||||||||||||||||||||
Sbjct 849 ACCTTCGCATCTTGTCTCTTCTGCACAGACT-CTAGTGTACGTACATTGGTACAAACCAT 791
Query 394 GTTGACACGTACGTCT-TGGAGTCACCG-TTGGTGTACGGTCAACC 437
|||||||||| || ||||| || | ||||||||| |||||||
Sbjct 790 GTTGACACGT-CGGGGATGGAG-CAGAGGTTGGTGTACTGTCAACC 747
Score = 65.8 bits (35), Expect = 7e-10
Identities = 59/70 (84%), Gaps = 4/70 (6%)
Strand=Plus/Minus
Query 202 TAGTGTATGTACATTGGTACAAACCATGTTGACACGTACGTCT-TGGAGTCACCG-TTGG 259
||||||| ||||||||||||||||||||||||||||| || ||||| || | ||||
Sbjct 817 TAGTGTACGTACATTGGTACAAACCATGTTGACACGT-CGGGGATGGAG-CAGAGGTTGG 760
Query 260 TGTACGGTCA 269
||||| ||||
Sbjct 759 TGTACTGTCA 750
> AT5G28487.1 | Symbols: | transposable element gene | chr5:10441691-10445995
REVERSE LENGTH=4305
Length=4305
Score = 75.0 bits (40), Expect = 1e-12
Identities = 85/106 (80%), Gaps = 6/106 (6%)
Strand=Plus/Minus
Query 335 ACCTTCGCAGCCTGTATCTTGTACACATTCTGTTA-TGTACGTACATTGGTACAAACCAT 393
||||||||| | ||| || | | |||| || || ||||||||||||||||||||||||
Sbjct 852 ACCTTCGCATCTTGTCTCCTCTGCACAGACT-CTAGTGTACGTACATTGGTACAAACCAT 794
Query 394 GTTGACACGTACGTCT-TGGAGTCACCG-TTGGTGTACGGTCAACC 437
|||||||||| || ||||| || | ||||||||| |||||||
Sbjct 793 GTTGACACGT-CGGGGATGGAG-CAGAGGTTGGTGTACAGTCAACC 750
Score = 65.8 bits (35), Expect = 7e-10
Identities = 59/70 (84%), Gaps = 4/70 (6%)
Strand=Plus/Minus
Query 202 TAGTGTATGTACATTGGTACAAACCATGTTGACACGTACGTCT-TGGAGTCACCG-TTGG 259
||||||| ||||||||||||||||||||||||||||| || ||||| || | ||||
Sbjct 820 TAGTGTACGTACATTGGTACAAACCATGTTGACACGT-CGGGGATGGAG-CAGAGGTTGG 763
Query 260 TGTACGGTCA 269
||||| ||||
Sbjct 762 TGTACAGTCA 753
> AT2G12150.1 | Symbols: | transposable element gene | chr2:4884407-4887236
REVERSE LENGTH=2830
Length=2830
Score = 75.0 bits (40), Expect = 1e-12
Identities = 85/106 (80%), Gaps = 6/106 (6%)
Strand=Plus/Minus
Query 335 ACCTTCGCAGCCTGTATCTTGTACACATTCTGTTA-TGTACGTACATTGGTACAAACCAT 393
||||||||| | ||| || | | |||| || || ||||||||||||||||||||||||
Sbjct 852 ACCTTCGCATCTTGTCTCCTCTGCACAGACT-CTAGTGTACGTACATTGGTACAAACCAT 794
Query 394 GTTGACACGTACGTCT-TGGAGTCACCG-TTGGTGTACGGTCAACC 437
|||||||||| || ||||| || | ||||||||| |||||||
Sbjct 793 GTTGACACGT-CGGGGATGGAG-CAGAGGTTGGTGTACAGTCAACC 750
Score = 65.8 bits (35), Expect = 7e-10
Identities = 59/70 (84%), Gaps = 4/70 (6%)
Strand=Plus/Minus
Query 202 TAGTGTATGTACATTGGTACAAACCATGTTGACACGTACGTCT-TGGAGTCACCG-TTGG 259
||||||| ||||||||||||||||||||||||||||| || ||||| || | ||||
Sbjct 820 TAGTGTACGTACATTGGTACAAACCATGTTGACACGT-CGGGGATGGAG-CAGAGGTTGG 763
Query 260 TGTACGGTCA 269
||||| ||||
Sbjct 762 TGTACAGTCA 753
> AT2G05490.1 | Symbols: | transposable element gene | chr2:2006873-2009701
REVERSE LENGTH=2829
Length=2829
Score = 71.3 bits (38), Expect = 1e-11
Identities = 60/70 (86%), Gaps = 4/70 (6%)
Strand=Plus/Minus
Query 370 TGTACGTACATTGGTACAAACCATGTTGACACGTACGTCT-TGGAGTCACCG-TTGGTGT 427
|||||||||||||||||||||||||||||||||| || ||||| || | |||||||
Sbjct 817 TGTACGTACATTGGTACAAACCATGTTGACACGT-CGGGGATGGAG-CAGAGGTTGGTGT 760
Query 428 ACGGTCAACC 437
|| |||||||
Sbjct 759 ACAGTCAACC 750
Score = 65.8 bits (35), Expect = 7e-10
Identities = 59/70 (84%), Gaps = 4/70 (6%)
Strand=Plus/Minus
Query 202 TAGTGTATGTACATTGGTACAAACCATGTTGACACGTACGTCT-TGGAGTCACCG-TTGG 259
||||||| ||||||||||||||||||||||||||||| || ||||| || | ||||
Sbjct 820 TAGTGTACGTACATTGGTACAAACCATGTTGACACGT-CGGGGATGGAG-CAGAGGTTGG 763
Query 260 TGTACGGTCA 269
||||| ||||
Sbjct 762 TGTACAGTCA 753
> AT1G45070.1 | Symbols: | transposable element gene | chr1:17035871-17038630
FORWARD LENGTH=2760
Length=2760
Score = 71.3 bits (38), Expect = 1e-11
Identities = 60/70 (86%), Gaps = 4/70 (6%)
Strand=Plus/Minus
Query 370 TGTACGTACATTGGTACAAACCATGTTGACACGTACGTCT-TGGAGTCACCG-TTGGTGT 427
|||||||||||||||||||||||||||||||||| || ||||| || | |||||||
Sbjct 817 TGTACGTACATTGGTACAAACCATGTTGACACGT-CGGGGATGGAG-CAGAGGTTGGTGT 760
Query 428 ACGGTCAACC 437
|| |||||||
Sbjct 759 ACAGTCAACC 750
Score = 65.8 bits (35), Expect = 7e-10
Identities = 59/70 (84%), Gaps = 4/70 (6%)
Strand=Plus/Minus
Query 202 TAGTGTATGTACATTGGTACAAACCATGTTGACACGTACGTCT-TGGAGTCACCG-TTGG 259
||||||| ||||||||||||||||||||||||||||| || ||||| || | ||||
Sbjct 820 TAGTGTACGTACATTGGTACAAACCATGTTGACACGT-CGGGGATGGAG-CAGAGGTTGG 763
Query 260 TGTACGGTCA 269
||||| ||||
Sbjct 762 TGTACAGTCA 753
> AT3G28110.1 | Symbols: | transposable element gene | chr3:10461763-10462827
FORWARD LENGTH=1065
Length=1065
Score = 69.4 bits (37), Expect = 5e-11
Identities = 85/107 (79%), Gaps = 8/107 (7%)
Strand=Plus/Minus
Query 335 ACCTTCGCAGCCTGTATCTTGTACACATTCTGTTA-TGTACGTACATTGGTACAAACCAT 393
||||||||| | ||| || | | |||| || || ||||||||||||||||||||||||
Sbjct 852 ACCTTCGCATCTTGTCTCCTCTGCACAGACT-CTAGTGTACGTACATTGGTACAAACCAT 794
Query 394 GTTGACACGTACGTCT-TGGAGTCACCG-TTGGTGTACG-GTCAACC 437
|||||||||| || ||||| || | |||||||| | |||||||
Sbjct 793 GTTGACACGT-CGGGGATGGAG-CAGAGGTTGGTGTA-GTGTCAACC 750
Score = 63.9 bits (34), Expect = 2e-09
Identities = 36/37 (97%), Gaps = 0/37 (0%)
Strand=Plus/Minus
Query 202 TAGTGTATGTACATTGGTACAAACCATGTTGACACGT 238
||||||| |||||||||||||||||||||||||||||
Sbjct 820 TAGTGTACGTACATTGGTACAAACCATGTTGACACGT 784
> AT2G16150.1 | Symbols: | transposable element gene | chr2:7009205-7011913
FORWARD LENGTH=2709
Length=2709
Score = 69.4 bits (37), Expect = 5e-11
Identities = 84/106 (79%), Gaps = 6/106 (6%)
Strand=Plus/Minus
Query 335 ACCTTCGCAGCCTGTATCTTGTACACATTCTGTTA-TGTACGTACATTGGTACAAACCAT 393
||||||||| | ||| || | | |||| || || ||||||||||||||||||||||||
Sbjct 852 ACCTTCGCATCTTGTCTCCTCTGCACAGACT-CTAGTGTACGTACATTGGTACAAACCAT 794
Query 394 GTTGACACGTACGTCT-TGGAGTCACCG-TTGGTGTACGGTCAACC 437
|||||||||| || | ||| || | ||||||||| |||||||
Sbjct 793 GTTGACACGT-CGGGGATAGAG-CAGAGGTTGGTGTACAGTCAACC 750
Score = 63.9 bits (34), Expect = 2e-09
Identities = 36/37 (97%), Gaps = 0/37 (0%)
Strand=Plus/Minus
Query 202 TAGTGTATGTACATTGGTACAAACCATGTTGACACGT 238
||||||| |||||||||||||||||||||||||||||
Sbjct 820 TAGTGTACGTACATTGGTACAAACCATGTTGACACGT 784
> AT1G29075.1 | Symbols: | transposable element gene | chr1:10153543-10154701
FORWARD LENGTH=1159
Length=1159
Score = 60.2 bits (32), Expect = 3e-08
Identities = 32/32 (100%), Gaps = 0/32 (0%)
Strand=Plus/Minus
Query 370 TGTACGTACATTGGTACAAACCATGTTGACAC 401
||||||||||||||||||||||||||||||||
Sbjct 816 TGTACGTACATTGGTACAAACCATGTTGACAC 785
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 41041298099
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5