BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg497237 Length=1633 Score E Sequences producing significant alignments: (Bits) Value AT5G55760.1 | Symbols: SRT1 | sirtuin 1 | chr5:22567222-2257096... 2575 0.0 > AT5G55760.1 | Symbols: SRT1 | sirtuin 1 | chr5:22567222-22570963 FORWARD LENGTH=1729 Length=1729 Score = 2575 bits (1394), Expect = 0.0 Identities = 1558/1638 (95%), Gaps = 7/1638 (0%) Strand=Plus/Plus Query 1 GAGAGGCAGAGAAGGTGGTTC--C-TCTTGTCCAAAAGAGAAGAC-AAATCTAAATGTCT 56 |||||||||||||||| |||| | |||||||||||||||||||| ||| |||||||||| Sbjct 8 GAGAGGCAGAGAAGGT-GTTCTTCTTCTTGTCCAAAAGAGAAGACAAAACCTAAATGTCT 66 Query 57 TTAGGTTACGCTGAGAAATTATCCTTCATTGAAGATGTTGGTCAGGTCGGCATGGCCGAA 116 ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| ||| Sbjct 67 TTAGGTTACGCAGAGAAATTATCCTTCATTGAAGATGTTGGTCAAGTCGGCATGGCTGAA 126 Query 117 TTCTTCGACCCATCTCATGTACTACAATGCAAGATTGAAGAACTTGCTAAGTTGATTCAA 176 |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct 127 TTCTTCGACCCATCTCATCTTCTACAATGCAAGATTGAAGAACTTGCTAAGTTGATTCAA 186 Query 177 AAGAGTAAGCATCTAGTAGTCTTTACTGGTGCAGGCATTTCAACTTCTTGTGGTATTCCT 236 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 187 AAGAGTAAGCATCTAGTAGTCTTTACTGGTGCAGGCATTTCAACTTCTTGTGGTATTCCT 246 Query 237 GATTTCCGAGGCCCCAAAGGAATTTGGACGCTACAGCGCGAGGGCAAAGATTTACCCAAA 296 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| Sbjct 247 GATTTCCGAGGCCCCAAAGGAATTTGGACGTTACAGCGCGAGGGCAAAGATTTACCTAAA 306 Query 297 GCATCTCTGCCATTTCATCGTGCAATGCCGAGCATGACTCATATGGCTTTGGTTGAATTA 356 ||||||||||||||||| |||||||||||||| ||||| ||||||||||||||||||||| Sbjct 307 GCATCTCTGCCATTTCACCGTGCAATGCCGAGTATGACCCATATGGCTTTGGTTGAATTA 366 Query 357 GAAAGAGCTGGCATTTTAAAATTTGTTATCAGTCAGAATGTGGACGGCTTACATCTTCGA 416 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 367 GAAAGAGCTGGCATTTTAAAATTTGTTATCAGTCAGAATGTGGATGGCTTACATCTTCGA 426 Query 417 TCTGGAATACCAAGAGAAAAGCTTTCTGAACTGCATGGAGACTCTTTTATGGAGATGTGT 476 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 427 TCTGGAATACCAAGAGAGAAGCTTTCTGAACTGCATGGAGACTCTTTTATGGAGATGTGC 486 Query 477 CCATCTTGTGGAGCAAAGTACCTGCGTGATTTCGAGGTGGAAACTATTGGATTAAAGGAG 536 ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 487 CCATCATGTGGAGCAGAGTACCTGCGTGATTTCGAGGTGGAAACTATTGGATTAAAGGAG 546 Query 537 ACATCAAGAAGGTGTTCTGTTGAAAAGTGTGGAGCTAAACTTAAAGATACGGTCCTAGAC 596 |||||||||| ||||||||||||||||||||||||||||||||||||||||||| | || Sbjct 547 ACATCAAGAAAGTGTTCTGTTGAAAAGTGTGGAGCTAAACTTAAAGATACGGTCTTGGAT 606 Query 597 TGGGAGGATGCTTTGCCTCCGAAAGAGATTGATCCAGCAGAGAAGCACTGCAAAATGGCT 656 |||||||||||||||||||| ||||| |||||||| || |||||||||||||||| |||| Sbjct 607 TGGGAGGATGCTTTGCCTCCAAAAGAAATTGATCCTGCGGAGAAGCACTGCAAAAAGGCT 666 Query 657 GATCTTGTACTTTGTTTGGGTACCAGTTTGCAGATAACCCCTGCTTGCAATTTGCCTCTC 716 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 667 GATCTTGTACTCTGTTTGGGTACCAGTTTGCAGATAACCCCTGCTTGCAATTTGCCTCTC 726 Query 717 AAGTGTCTCAGAGGTGGAGGCAAGATCGTGATAGTCAATCTTCAGAAAACCCCGAAGGAC 776 |||||||||| |||||||||||||||||| ||||| |||||||||||||| ||||| ||| Sbjct 727 AAGTGTCTCAAAGGTGGAGGCAAGATCGTCATAGTTAATCTTCAGAAAACACCGAAAGAC 786 Query 777 AAGAAAGCAAATGTTGTAATTCATGGTCTTGTTGATAAGGTGGTTGCAGGGGTCATGGAA 836 |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct 787 AAGAAAGCAAATGTAGTGATTCATGGTCTTGTTGATAAGGTGGTTGCAGGGGTCATGGAA 846 Query 837 TCTCTCAACATGAAGATTCCTCCATATGTCAGAATCGATCTTTTCCAGATAATCCTAACT 896 || |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 847 TCGCTCAACATGAAGATTCCTCCATATGTCAGAATTGATCTTTTCCAGATAATCCTAACT 906 Query 897 CAATCTTTAAGCGGAGATCAGAGGTTTATTAATTGGACCCTGCGTGTTGCAAGTGTTCAT 956 |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 907 CAATCTATAAGCGGAGATCAGAGGTTTATTAATTGGACCCTGCGTGTTGCGAGTGTTCAT 966 Query 957 GGATTGACTTCTCAGTTACCATTCATCGAGTCTATCGAGGTTTCTTTTTCAGATAACCAG 1016 ||||||||||||||||||||||||||| ||||||| ||||||||||| ||||||||||| Sbjct 967 GGATTGACTTCTCAGTTACCATTCATCAAGTCTATTGAGGTTTCTTTCTCAGATAACCAT 1026 Query 1017 AATTACAAAGACGCAGTTCTCGATAAGCAGCCTTTTCTTATGAAAAGGAGAACAGCACGA 1076 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1027 AATTACAAAGACGCAGTTCTCGATAAGCAGCCTTTTCTTATGAAAAGGAGAACAGCACGA 1086 Query 1077 AACGAAACTTTTGATATATTCTTCAAAGTTAACTACAGTGACGGTTGTGACTGTGTCTCC 1136 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 1087 AACGAAACTTTTGATATATTCTTTAAAGTTAACTACAGTGACGGTTGTGACTGTGTCTCC 1146 Query 1137 ACTCAACTTAGCCTCCCATTTGAATTCAAGGTTTCAACAAAAGAGCATGTAGAGATTATT 1196 |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| Sbjct 1147 ACTCAACTTAGCCTCCCATTTGAATTCAAGATTTCAACAGAAGAGCATGTAGAGATTATT 1206 Query 1197 GACAAGGAGGCAGTGCTACAAAGCCTGAGGGAGAAAGCGGTTGAAGAATCCAGTTGCGGG 1256 ||||||||||| ||||||||||||||||| ||||||||||| |||||||||||||||||| Sbjct 1207 GACAAGGAGGCTGTGCTACAAAGCCTGAGAGAGAAAGCGGTAGAAGAATCCAGTTGCGGG 1266 Query 1257 CAAAGCGGTGTGGTTGAGAGAAGAGCGGTTTCTGAACCGAGAAGTGAGGCTGTTGTGTAT 1316 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 1267 CAAAGCGGTGTGGTTGAGAGAAGAGTGGTTTCTGAACCGAGAAGTGAGGCTGTTGTGTAT 1326 Query 1317 GCTACTGTGACCAGTCTCAGGACTTACCATTGTCAACAATCTCTGCTTGCTAATGGATAC 1376 ||||| ||||| |||||||||||||||||| |||||||||||||||||||||||||| || Sbjct 1327 GCTACGGTGACTAGTCTCAGGACTTACCATAGTCAACAATCTCTGCTTGCTAATGGAGAC 1386 Query 1377 CTCAAATGGAAGCTGGAAGGTTCTGGAACGTCCCGTAAACGTTCTAGAACCGGCAAACGA 1436 || |||||||||||||||||||||||||| ||||||||||| ||||||||||| || ||| Sbjct 1387 CTGAAATGGAAGCTGGAAGGTTCTGGAACATCCCGTAAACGCTCTAGAACCGGGAAGCGA 1446 Query 1437 AAATCAAAGGCACAGGAAGAAGAATCCAAGGCATAGGAAAGAAGAAAAGAAAGCTTTTGG 1496 ||||| ||||| | || ||||||| |||||||||||||| |||||||||||||||||||| Sbjct 1447 AAATCGAAGGCTCTGGCAGAAGAAACCAAGGCATAGGAA-GAAGAAAAGAAAGCTTTTGG 1505 Query 1497 TGTATATAAACAAACACTAGTCTAACCGGAATAGAAAATATGGAAGTTAGTGGCGTTTTG 1556 |||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct 1506 TGTATATAAAGAAACACTAGTCTAACCGGAATAGGTAATATGGAAGTTATTGGCGTTTTG 1565 Query 1557 AGGGCTGAGTGAATTTTGTTTTTGGTCCACACTCGGTTCT-TTAAAACCGAAGTTAACCA 1615 || |||||||||||||||||||||||||||| |||||||| || |||| |||||||||| Sbjct 1566 AGAGCTGAGTGAATTTTGTTTTTGGTCCACATTCGGTTCTCTTGAAACAAAAGTTAACCA 1625 Query 1616 GGAATTGAAGGGGATAAT 1633 ||||||||| | |||||| Sbjct 1626 GGAATTGAAAGAGATAAT 1643 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 80672275815 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5