BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg497264
Length=1709
Score E
Sequences producing significant alignments: (Bits) Value
AT1G71900.1 | Symbols: | Protein of unknown function (DUF803) ... 2394 0.0
AT1G34470.1 | Symbols: | Protein of unknown function (DUF803) ... 584 8e-166
> AT1G71900.1 | Symbols: | Protein of unknown function (DUF803)
| chr1:27061486-27064496 FORWARD LENGTH=1743
Length=1743
Score = 2394 bits (1296), Expect = 0.0
Identities = 1607/1745 (92%), Gaps = 70/1745 (4%)
Strand=Plus/Plus
Query 1 TCTCAGCGTTTCTCTTTTTGGTCCTCAAATCTTCACCTACAAGATCTTC-T--TCCCTCA 57
|||||||||||||||||||||||||||||||||||||| |||||||||| | ||||||
Sbjct 22 TCTCAGCGTTTCTCTTTTTGGTCCTCAAATCTTCACCTTCAAGATCTTCTTCGTCCCTCG 81
Query 58 ATCTCCGATTTCAAATCTCGCTTCTCCGTTCAAGCAA---C-C-----TCC-A---T--- 101
|||||||||||||||||||| |||||||||||||||| | | ||| | |
Sbjct 82 ATCTCCGATTTCAAATCTCGTTTCTCCGTTCAAGCAACCTCTCTGAATTCCTAGTCTCAC 141
Query 102 -----GAATTAGTAGTCGGAGAAGCGATTTCTGCTTCGATCTCTAAATCCGAAGTTCCGA 156
||||||||| |||| ||||||||||||||||||||||||| ||| ||||||||||
Sbjct 142 AGCAGGAATTAGTACTCGGCGAAGCGATTTCTGCTTCGATCTCTACATCTGAAGTTCCGA 201
Query 157 TCTGACGAAATCTAGGGTTTTCTCATCTGGGTCGAAGTTAAAGT-GGAAAAAGGTTTCGA 215
||||||||||| ||||| | || ||||||||||||||||| | |||||||| ||||||
Sbjct 202 TCTGACGAAATTTAGGG---T-TCGTCTGGGTCGAAGTTAAA-TAGGAAAAAGATTTCGA 256
Query 216 ATTTGGCGTT-AGAATGGCGGAATCTGGTGGAAGCTGGCGAGATTCTTATAAAGGAATGT 274
| ||||| || ||||||||||||||| ||||||| ||| |||||||||||||||||||||
Sbjct 257 A-TTGGC-TTGAGAATGGCGGAATCTAGTGGAAGTTGGAGAGATTCTTATAAAGGAATGT 314
Query 275 CGTCTGATAACATCAAGGGTTTGGTTTTAGCATTGTCTTCTAGTTTGTTCATTGGTGCTA 334
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 315 CGTCTGATAACATCAAGGGTTTGGTTTTAGCGTTGTCTTCTAGTTTGTTCATTGGTGCTA 374
Query 335 GTTTCATTGTTAAGAAGAAAGGGCTTAAGAAAGCTGCGAGCACTGGCACTAGGGCAGGTG 394
|||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||
Sbjct 375 GTTTCATTGTTAAGAAGAAAGGGCTTAAGAAAGCTGCGAGTACTGGTACTAGGGCAGGTG 434
Query 395 TTGGTGGGTATTCTTATCTCTACGAGCCCCTTTGGTGGATCGGCATGACGACAATGTTAC 454
|||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||
Sbjct 435 TTGGTGGGTATTCTTATCTCTACGAGCCTCTTTGGTGGATTGGCATGACGACAATGTTAC 494
Query 455 TTGGTGAAATTGCCAATTTCGCTGCTTATGCATTTGCGCCGGCTATACTTGTCACTCCTC 514
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 495 TTGGTGAAATTGCCAATTTCGCTGCTTATGCATTTGCGCCTGCTATACTTGTCACTCCTC 554
Query 515 TAGGTGCTGTCAGTATCATTATCAGTGCTGTCTTAGCTCATATTATATTACGGGAAAAAC 574
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 555 TAGGTGCTGTCAGTATCATTATCAGTGCTGTCTTAGCTCATATTATATTACGGGAAAAAC 614
Query 575 TACACATCTTTGGAATTCTTGGCTGTGCCTTATGTGTTGTGGGTTCCACAACTATTGTCT 634
|||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 615 TACATATCTTTGGAATTCTTGGCTGTGCCTTATGTGTTGTGGGTTCCACAACAATTGTCT 674
Query 635 TACATGCCCCTCAAGAACAAGAAATTGATTCTGTGATTGAAGTTTGGAATCTTGCAACAG 694
|||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| |
Sbjct 675 TACATGCCCCTCAAGAACGTGAAATTGACTCTGTGATTGAAGTTTGGAATCTTGCAACTG 734
Query 695 AACCAGCCTTCATGTTCTATGCGAGTCTGGTAATTGGGGCTGCTGTATTTCTCATTATCC 754
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 735 AACCAGCATTCATGTTCTATGCGAGTCTGGTAATTGGGGCTGCTGTATTTCTCATTATCC 794
Query 755 GTTTTGCCCCCCTATATGGGCAAACAAACGTAATGGTTTATATTGGTATTTGCTCGCTTG 814
|||||| |||| ||||||||||||||| ||||||||||| ||||||||||| ||||| |
Sbjct 795 GTTTTGTGCCCCAATATGGGCAAACAAATGTAATGGTTTACATTGGTATTTGTTCGCTCG 854
Query 815 TGGGATCATTATCGGTCATGAGTGTAAAAGCACTTGGAATAGCATTAAAGCTGACATTTT 874
|||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Sbjct 855 TGGGATCATTATCGGTAATGAGTGTAAAAGCACTTGGAATAGCATTAAAGCTGACCTTTT 914
Query 875 CAGGAACAAATCAGTTATTTTATCCTCAAACATGGATATTCACCTTGGTCGTACTTACCT 934
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 915 CAGGAACAAATCAGTTATTTTATCCTCAAACATGGATATTCACCTTGGTCGTACTTACTT 974
Query 935 GTGTGATAACCCAATTGAACTACTTAAACAAGGCTCTTGATACATTCAATACAGCTATAG 994
||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 975 GTGTGGTAACCCAACTGAACTACTTAAACAAGGCTCTTGATACATTCAATACAGCTATAG 1034
Query 995 TATCTCCTATATACTATGTGATGTTTACATCTCTA-CTATTTTGGCCAGTGTCATCATGT 1053
|||||||||||||||| |||||||| ||||||||| |||||||||| |||||||||||||
Sbjct 1035 TATCTCCTATATACTACGTGATGTTCACATCTCTAACTATTTTGGCTAGTGTCATCATGT 1094
Query 1054 TTAAGTTGTATGAGGGACTGGGATCGACAAAACGGTACTCAAATTGTTACAGAAATGTGT 1113
||||| | | ||||||||| ||||||||||||||||||||||||||||| |||
Sbjct 1095 TTAAG--G-A-------CTGGGATCGGCAAAACGGTACTCAAATTGTTACAGAAATATGT 1144
Query 1114 GGATTTGTTACAATACTTTCAGGCACTTTTCTTCTCCACAGAACAAAGGATATGGTCGAG 1173
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1145 GGATTTGTTACAATACTTTCAGGCACTTTTCTTCTCCACAGAACAAAGGACATGGTCGAG 1204
Query 1174 GGTTCATCGGTAATATTACCGTTGCGGATAAGCAAGCATATAAATGAGGAAGAAGGCATT 1233
||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1205 GGTTCGTCGGTAATATTACCGTTGCGGATAAGCAAGCATATAAATGAAGAAGAAGGCATT 1264
Query 1234 CCACTTAGACGCCAAGAATCTCTCCGGTCACCTTAAAAGCTTCTTCGCTTTGTTTTCTGG 1293
||||| |||||||||||||||||||||||||||||||||||| |||||| ||||||||||
Sbjct 1265 CCACTCAGACGCCAAGAATCTCTCCGGTCACCTTAAAAGCTTTTTCGCTCTGTTTTCTGG 1324
Query 1294 TTCACTGCGATAACTGCAAACCAGATAGTCAACCTCTTTTCCTTATCTCGACCTACTATG 1353
| ||||||||||||||||||||||| | ||||||| |||||||||||||||| || ||||
Sbjct 1325 TCCACTGCGATAACTGCAAACCAGAGAATCAACCTTTTTTCCTTATCTCGACTTATTATG 1384
Query 1354 AACATGGACCATGGTTCTGTCTAACACTTACAAAATGGTTCTAGAAGATTGAAGAAGGAA 1413
|||||||||||||||||||||||||||||||||| |||||| ||||||| ||||||||||
Sbjct 1385 AACATGGACCATGGTTCTGTCTAACACTTACAAA-TGGTTCAAGAAGATCGAAGAAGGAA 1443
Query 1414 AGAGGAGCAAGAGGACGAGATCTCAGATGAGATCATCTTCTTCTCCAGTATCGGTAAATA 1473
||||||||| | |||| |||||||||||||||| | | | ||||||||||||
Sbjct 1444 AGAGGAGCA-G----CGAG------GATGAGATCATCTTCT-C-CAA-TATCGGTAAATA 1489
Query 1474 TGCTGTGAGTTCAAGCACACGCCATTAGCACACACCCACGCGTAAACCCTTT-TGTGGCA 1532
||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| ||
Sbjct 1490 TGCTGTGAGTTCAAGCACACGCCATTAGCACACACCCACGCCTAAACCCTTGGTGTGACA 1549
Query 1533 TTTAAAATTTTATAAACAAGAGATGGGTTTTGCTTAAATTGGTCTTACAAGCATCTATAA 1592
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1550 GTTAAAATTTTATAAACAAGAGATGGGTTTTGCCTAAATTGGTCTTACAAGCATCTATAA 1609
Query 1593 CTAAAGACTTCAATTCAAGATTTGCAtttttttttATATTGAATCTTCTATTTTTCTTCC 1652
|||||| |||||||||||||||||||| |||||||| | ||||||||||||||||||||
Sbjct 1610 CTAAAGGTTTCAATTCAAGATTTGCATTATTTTTTAT-T-GAATCTTCTATTTTTCTTCC 1667
Query 1653 TT-G--G-TT-G--G-TTTAAACCCTTTGAAAAACAAGAAATGGAGACTTTCTAAGTTGA 1704
|| | | || | | ||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1668 TTAGTTGGTTTGAAGCTTTAAACCCTTTGAAAAACAAGAAATGGAGACTTTGAAAGTTGA 1727
Query 1705 CGAAA 1709
|||||
Sbjct 1728 CGAAA 1732
> AT1G34470.1 | Symbols: | Protein of unknown function (DUF803)
| chr1:12604300-12607033 FORWARD LENGTH=1656
Length=1656
Score = 584 bits (316), Expect = 8e-166
Identities = 765/976 (78%), Gaps = 53/976 (5%)
Strand=Plus/Plus
Query 229 ATGGCGGAATCTG-GTGGAAGCTGGCGAGATTCTTATAAAGGAATGTCGTCTGATAACAT 287
||||| || | || |||| || ||| ||||| | |||||||||||||| || ||||| ||
Sbjct 275 ATGGC-GAGTTTGAGTGGGAGTTGGAGAGATGCGTATAAAGGAATGTCATCGGATAATAT 333
Query 288 CAAGGGTTTGGTTTTAGCATTGTCTTCTAGTTTGTTCATTGGTGCTAGTTTCATTGTTAA 347
|||||||| || || || || ||||| || || ||||||||||||||||||||||||||
Sbjct 334 AAAGGGTTTAGTATTGGCTTTATCTTCAAGCTTATTCATTGGTGCTAGTTTCATTGTTAA 393
Query 348 GAAGAAAGGGCTTAAGAAAGCTGCGAGCA-CTGG-CACTAGGGCAGGTGT-TGGTGGGTA 404
||||||||| || |||| ||||| | || |||| | | || |||||| | ||| || ||
Sbjct 394 GAAGAAAGGTCTCAAGAGAGCTG-GTGCTTCTGGTCTC-AGAGCAGGT-TCTGGAGGTTA 450
Query 405 TTCTTATCT-CTACGAGCCCCTTTGGTGGATCGGCATGACGACAATG-TTACTTGGTGAA 462
|||||| || || ||||| || |||||| | ||||||| || ||| || | || |||
Sbjct 451 TTCTTACCTGCTT-GAGCCTCTCTGGTGGGTAGGCATGATAACGATGATTG-TAGGGGAA 508
Query 463 ATTGCCAATTTCGCTGCTTATGCATTTGCGCCGGCTATACTT-GTCACTCCTCTAGGTGC 521
||||||||||| ||||||||||| |||||||| || || || || |||||||| |||||
Sbjct 509 ATTGCCAATTTTGCTGCTTATGCCTTTGCGCCTGCCATT-TTAGTAACTCCTCTTGGTGC 567
Query 522 TGTCAGTATCATTATCAGTGCTG-TCTTAGCTCATATTATATTACGGGAAAAACTACACA 580
| |||| || ||||||||||||| |||| |||||| | || ||| ||||| | || |
Sbjct 568 TCTCAGCATAATTATCAGTGCTGCTCTT-GCTCATGTCATCCTACACGAAAAGTTGCATA 626
Query 581 TCTTT-GGAATTCTTGGCTGTGCCTTATGTGTTGTGGGTTCCACAACTATTGTCTTACAT 639
|||| || ||||||| |||| |||||||||||| ||||| | ||||||||||||||||
Sbjct 627 -CTTTCGGGCTTCTTGGTTGTGTCTTATGTGTTGTTGGTTCGATAACTATTGTCTTACAT 685
Query 640 GCCCCTCAAGAACAAGAAATTGATTCTGTGATTG-AAGTTTGGAATCTTGCAACAGAACC 698
|| |||||||||||||| |||||||||||| || |||| ||||||||||| ||||||||
Sbjct 686 GCTCCTCAAGAACAAGAGATTGATTCTGTG-TTACAAGTATGGAATCTTGCGACAGAACC 744
Query 699 AGCCTT-CATGTTCTATGC-G-AGTCTGGTAATTGGGGCTGCTGT-ATTTCTCATTA-TC 753
|| || | | | ||| || | || | | || | || || || | || ||||| | |
Sbjct 745 TGCTTTTCTTCT-CTACGCTGCAG-CAG-TAGTAGGAGCAGCCATTATA-CTCAT-AGTT 799
Query 754 C-GTTTTGCCCCCCTA-TATGGGCAAACAAACGTAATGGTTTATATTGGTATTTGCTCGC 811
| |||| | || | | || || || || | || ||||| ||||| || |||| || |
Sbjct 800 CAGTTT-GTACCAC-AGTACGGTCAGTCACATGTCATGGTATATATCGGGGTTTGTTCTC 857
Query 812 TTGTGGGATCATTATCGGTCATGAGTGTAAAAGCACTTGGAATAGCATTAAAGCTGACAT 871
|||| |||||||| ||||||||||| || ||||| || || |||||||||||||| || |
Sbjct 858 TTGTTGGATCATTGTCGGTCATGAGCGTCAAAGCGCTCGGGATAGCATTAAAGCTTACGT 917
Query 872 TTTCAGGAACAAATCAGTTATTTTATCCTCAAACATGGATATTCAC-CTTGGTCGTACTT 930
||||||||| ||||||||| |||| ||||| |||||| | ||||| || | | || ||
Sbjct 918 TTTCAGGAATGAATCAGTTAATTTACCCTCAGACATGGGTCTTCACGCT-GATAGTTCTC 976
Query 931 ACCTGTGTGATAACCCAATTGAACTA-CTTAAACAAGGCTCTTGATACATTCAATACAGC 989
||||| |||||||||||| ||||||| || ||||||||| ||||| || ||||| || ||
Sbjct 977 ACCTGCGTGATAACCCAAATGAACTATCT-AAACAAGGCGCTTGACACTTTCAACACGGC 1035
Query 990 TATAGTATCTCCTATATACTATGTGATGTTTACATC-TCT-ACTATTTTGGCCAGTGTCA 1047
| |||| || |||||||||||||| ||||| ||||| | | || || | || |||||||
Sbjct 1036 TGTAGTTTCACCTATATACTATGTTATGTTCACATCAT-TGACCATCCTAGCTAGTGTCA 1094
Query 1048 TCATGTTTAAGTTGTATGAGGGACTGGGATCGACAAAACGGTACTCAAATTGTTACAGAA 1107
||||||||||| | | |||||||||||| |||| ||||| || || || ||
Sbjct 1095 TCATGTTTAAG--G-A-------CTGGGATCGACAGGACGGAACTCAGATAGTGACGGAG 1144
Query 1108 ATGTGTGGATTTGTTACAATACTTTCAGGCACTTTTCTT-CTCCACAGAACAAAGGATAT 1166
||||||| ||||| ||||| |||||||| || ||| || || |||| ||||||||||||
Sbjct 1145 TTGTGTGGGTTTGTGACAATCCTTTCAGGAACCTTT-TTGCTTCACAAAACAAAGGATAT 1203
Query 1167 GGTCGAGGGTTCATCG 1182
||| || ||||| |||
Sbjct 1204 GGTTGATGGTTCTTCG 1219
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 84487517235
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5