BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg497270
Length=2191
Score E
Sequences producing significant alignments: (Bits) Value
AT5G65630.1 | Symbols: GTE7 | global transcription factor group... 2034 0.0
AT5G10550.1 | Symbols: GTE2 | global transcription factor group... 459 7e-128
> AT5G65630.1 | Symbols: GTE7 | global transcription factor group
E7 | chr5:26225832-26228449 REVERSE LENGTH=2444
Length=2444
Score = 2034 bits (1101), Expect = 0.0
Identities = 1339/1448 (92%), Gaps = 40/1448 (3%)
Strand=Plus/Plus
Query 23 ATCGCCGGAATTTTCGCCGGTGATGTAATTTTCCCGC-CCTTTTTT-GGAGGTAAAAAAG 80
||||||||||||||||||||||||||||||||||||| |||||||| |||||| ||
Sbjct 76 ATCGCCGGAATTTTCGCCGGTGATGTAATTTTCCCGCGCCTTTTTTGGGAGGT---GAA- 131
Query 81 TTTTGTTTTTC-TC-AGAAGCTCGAGAAGAGTGAAAACCCCAGAAATGACCTTGCGATTC 138
|||| |||||| || | |||||||||||||||||||||||||||||||||||||||||||
Sbjct 132 TTTT-TTTTTCTTCTAAAAGCTCGAGAAGAGTGAAAACCCCAGAAATGACCTTGCGATTC 190
Query 139 GTATGGCTCCGGCTGTTTTGGGTACCTTAAACGAACCGTCGTACCAGGAACAATGCGGCG 198
||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||
Sbjct 191 GTATGGCTCCGGCTGTTTTCGCTACCTTAAACGAACCGTCGTACCAGGAACAATGCGGCG 250
Query 199 CCGTTTTTATGAGGAAATTTACAAACCAATCCGTCACCGAAAACACCAATAACCTTCCTC 258
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 251 CCGTTTTTATGAGGAAATTTACAAACCAATCCGTCACCGAAAACACCAATAACCTTCCGC 310
Query 259 TCTTCAACCCTAACCCTAACCCTAATTTCGACAGGAGCAATTCGAGCAATCAGTTCGATG 318
||||||||||||||||||||||||||||||| ||||||||||||||||| |||| |||||
Sbjct 311 TCTTCAACCCTAACCCTAACCCTAATTTCGAAAGGAGCAATTCGAGCAAGCAGTGCGATG 370
Query 319 ATTCGTCGGAATTTGGAAGCTACGCTACTTTTAATATCGCTGGGTACACCTCAAATCAGC 378
| |||||||||||||||||||| |||||||||||| |||||||||||||||||| |||||
Sbjct 371 ACTCGTCGGAATTTGGAAGCTATGCTACTTTTAATCTCGCTGGGTACACCTCAAGTCAGC 430
Query 379 TCAGGGAGCTGAAGAAGCG-TTTCACCTCTGAGCTCGAGCAGATTCGGATCCTGAGAGAA 437
|||||||||| |||||||| ||| ||||| |||||| |||||||||||||||||||||||
Sbjct 431 TCAGGGAGCTTAAGAAGCGCTTT-ACCTCAGAGCTCAAGCAGATTCGGATCCTGAGAGAA 489
Query 438 CGGATCGAGTCAGGGACGTTCGAGACTCAGCAAGCTTATACTATCCCGGAGGTACCCGCC 497
|||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||
Sbjct 490 CGGATCGAGTCAGGGACGTTCGAGACTCAGCAAGGTTATACTATCCCAGAGGTACCCGCC 549
Query 498 GTTCGATCAGCTCCGTTGAATAGTTTCGCCGGTGAAAAGAATGACCTTGGACCGAAGAAG 557
|||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||
Sbjct 550 GTTCGATCAGCTCCGTTGAATAACTTCACCGGTGAAAAGAATGACCTTGGACCGAAGAAG 609
Query 558 AAGAAGCAGAAGAAAAATGTGTCAGGTCTCAAGCGAAGCAATCAATTTACTGATTCGGAT 617
||||| |||||||||||||||||||||||||||||||||||||||||| | ||||||
Sbjct 610 AAGAAACAGAAGAAAAATGTGTCAGGTCTCAAGCGAAGCAATCAATTTGGTCCGTCGGAT 669
Query 618 CCGGAGTCGGAGAAATTATTGGCTGGTATGTTGAATACTTGTGGTCAAATCTTGGTGAAG 677
||||||||||||||||||||||| |||||||||||||| ||| |||| ||||||||||||
Sbjct 670 CCGGAGTCGGAGAAATTATTGGCCGGTATGTTGAATACCTGTAGTCAGATCTTGGTGAAG 729
Query 678 CTGATGAAGCATAAATGGGCGTGGGTGTTCAACACTCCTGTTGATGTGGTTGGTTTAGGG 737
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 730 CTAATGAAGCATAAATGGGCGTGGGTGTTCAACACTCCTGTTGATGTGGTTGGTTTAGGG 789
Query 738 CTTCATGATTATCATCAGGTTGTGAAGAAACCTATGGATCTGGGTACGGTTAAGTTGAAT 797
||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||
Sbjct 790 CTTCATGATTATCATCAGGTTGTGAAGAAACCTATGGATCTGGGTACAGTGAAATTGAAT 849
Query 798 CTTGATAAAGGGTTTTACGTTTCGCCGATTGATTTTGCTACTGATGTCAGATTGACATTC 857
||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 850 CTTGATAAAGGATTCTACGTTTCGCCGATTGATTTTGCTACTGATGTCAGATTGACATTC 909
Query 858 AACAATGCAATGACGTATAATCCAAAGGGTCAAGATGTGTATTTTATGGCTGATAAGCTT 917
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 910 GACAATGCAATGACGTATAATCCAAAGGGACAAGATGTGTATTTTATGGCTGATAAGCTT 969
Query 918 TTGGATCATTTCGATGGAATGTTCAATCCTGCTTTTAAGAAGTTTGAGGCTCAGCAGCTT 977
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 970 TTGGATCATTTCGATGGAATGTTCAATCCTGCTTTTAAGAAGTTTGAGGCTCAGCAGCTT 1029
Query 978 AAACTCACTGGTTCTTCATCTCGTCTTGAACCTGAG---------G--T-CAAGCAAAGA 1025
||||||||||||||||||||||||| ||||||||| | | ||||||||||
Sbjct 1030 AAACTCACTGGTTCTTCATCTCGTCCTGAACCTGACTTCAAACCTGACTTCAAGCAAAGA 1089
Query 1026 CATTGGAATCAGAATTCGCCAATGGTGGCAAATCCTAGGAAAGGAACCGAACAAATATCT 1085
|| |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1090 CAGTGGAATCAGAATCCGCCAATGGTGGCGAATCCTAGGAAAGGAACCGAACAAATATCT 1149
Query 1086 ATCGCGAAGAAGCTTGATTCAGTGAAGCCGCCACTACCTGCATTGCCTCCTCAATTAGTC 1145
|| ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||
Sbjct 1150 ATTGCGAAGAAGCTTGATTCAGTGAAGCCGCCACAACCTACATTGCCTCCTCAATTAGTC 1209
Query 1146 GAGCCGTCGCGTGTTCAATctccttctccaccacctcctcctcc--tcctccGG--TGG- 1200
|||||||| || ||||||||||||||||| || || |||||||| | | | | ||
Sbjct 1210 GAGCCGTCACGCGTTCAATCTCCTTCTCCTCCTCCCCCTCCTCCGGTGATACAGCCTGAA 1269
Query 1201 -TT--G-AGCCTCAACT------TCCGCAGCTGGTTATTGAAGTAGAAGCACCTCCTGAT 1250
|| | ||||||||| ||| ||||| | ||||||||||||||||||||||||
Sbjct 1270 CTTCCGCAGCCTCAACCACCACCTCCACAGCTTGAAATTGAAGTAGAAGCACCTCCTGAT 1329
Query 1251 GTGAGTGACGTGACAAAAGGAAGGAAGGGGAAGTTGCCGAAGCCTAAGGCTAAGGATCCA 1310
|||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1330 GTGAGTGAAGTGTCAAAAGGAAGGAAGGGGAAGTTGCCGAAGCCTAAGGCTAAGGATCCA 1389
Query 1311 AATAAGAGGTTGATGACAATCGA-GCAGAAGTCAAAGCTTGGTATGAATCTACAAGACTT 1369
||||||||||||||||| || || | ||||||||||||||||||||||||||||||||||
Sbjct 1390 AATAAGAGGTTGATGACGATGGAAG-AGAAGTCAAAGCTTGGTATGAATCTACAAGACTT 1448
Query 1370 ACCTCCTGAGAAGCTTGGACAGTTGGTTCAGATTCTCAGGAAGAGAAACGGTCATTTAGC 1429
||||||||||||||||| |||||| ||||||||||||||||||||||||| ||||||||
Sbjct 1449 GCCTCCTGAGAAGCTTGGTCAGTTGCTTCAGATTCTCAGGAAGAGAAACGGACATTTAGC 1508
Query 1430 TCAAGATG 1437
||||||||
Sbjct 1509 TCAAGATG 1516
Score = 612 bits (331), Expect = 5e-174
Identities = 385/409 (94%), Gaps = 12/409 (3%)
Strand=Plus/Plus
Query 1437 GCAAAATCAAGCGGCAAGGGTTTATCAGGAACGTGTCAACTCCCACCTAGGAACATGACT 1496
||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| ||
Sbjct 1607 GCAAAATCAAGCGCCAAGGGTTTATCAGGAACGTGTCAACT-CCACCTAGGAACATGGCT 1665
Query 1497 TCGGTAGCAGAAATGGGTAGTGCGGAGAAGAGAACAAGGAGAGGAGATGCAGGGGAAGAG 1556
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1666 TCGGTAGCAGAAATGGGTAGTGCGGAGAAGAGAACAAGGAGAGGAGATGCAGGGGAAGAG 1725
Query 1557 GATGTAGACATTGGAGAAGACATACCAATCGAAGATTACCCATCTGTAGAGATCGAAAGA 1616
||||| ||||||||||| |||||||||||||||||||| |||||||||||||||||||||
Sbjct 1726 GATGTTGACATTGGAGAGGACATACCAATCGAAGATTATCCATCTGTAGAGATCGAAAGA 1785
Query 1617 GATGGTACTGCAGTTGCAG--G-T---AGT-G-GGT-CTAGTTCTTCAGGCAGTTCCAGT 1667
||||||||||||||||||| | | ||| | ||| |||||||||||||||||||||||
Sbjct 1786 GATGGTACTGCAGTTGCAGCTGCTGCTAGTAGTGGTTCTAGTTCTTCAGGCAGTTCCAGT 1845
Query 1668 TCTAGTGGTGGTAGTTCCTCGTCTAGTGATTCAGGGTCAGGTGGGAGTTCATCAGGTAGT 1727
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1846 TCTAGTGGTGGTAGTTCCTCGTCTAGTGATTCAGGGTCAGGTGGGAGTTCATCAGGTAGT 1905
Query 1728 GATTCTGATGCAGATAGTGTTCAATCGCCATTTGTGGAAGCAAAAGAAGCTCAATGATAG 1787
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct 1906 GATTCTGATGCAGATAGTGTTCAATCGCCATTTGTGGAAGCAAAAGAAGCCCAATGTTAA 1965
Query 1788 AATCATTTTGTGA-TTTAGCCGCTGATTCTGTCCTGAAGCACTAGGAAC 1835
|||||||| | || |||| ||| |||||||||||||||| |||||||||
Sbjct 1966 AATCATTTGG-GAATTTAACCGTTGATTCTGTCCTGAAGTACTAGGAAC 2013
Score = 359 bits (194), Expect = 7e-98
Identities = 331/389 (85%), Gaps = 41/389 (11%)
Strand=Plus/Plus
Query 1833 AACTGAAGGAAAAGGATTTGTTTTTTCTTTAGATGAAAAACTTAGGAAGCAGTTGTAGTT 1892
||||||||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||
Sbjct 2051 AACTGAAGG-AAAGGATTTGTTTTTTCTTTCGATGATAAACTTAGGAAGCAGATGTAGTT 2109
Query 1893 AGAGAGGAAAATGTAAT-GG--G-T----AGATA--G--AG----AG--AGAAGAATAGT 1934
||| || |||||||||| || | | ||| | | || || ||||||| |||
Sbjct 2110 AGAAAGAAAAATGTAATAGGTAGATAGAAAGAGAGTGCTAGTTTAAGCAAGAAGAAGAGT 2169
Query 1935 TCGTTATTTAATACCTTTTAGATTTAGGA-CTGTTTAGTGTATTTGTGAGATGCTGAACA 1993
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 2170 TCGTTATTTAATACCTTTTAGATTTAGGAGTTGTTTAGTGTATTTGTGAGATGCTGAACA 2229
Query 1994 GAGGGTGAGAGTGATTGCGCA---A-TGTa--agaagaagaagaagaaaagaGTCTTTTT 2047
|||||||||||||| || | | | |||| ||||||||||||||||||||||||||||
Sbjct 2230 GAGGGTGAGAGTGAGTGGGTAGGTACTGTAGGAGAAGAAGAAGAAGAAAAGAGTCTTTTT 2289
Query 2048 CGGTTCTATTGACT--Attt-tttttCCTATGTC-GTTAGTGTTAAAAAGTCTGGTTGTG 2103
|||||||| |||| |||| |||||| | ||| || ||||||||| ||||||||||||
Sbjct 2290 AGGTTCTAT-GACTTTATTTATTTTTCTT-TGTTAGT-AGTGTTAAAGAGTCTGGTTGTG 2346
Query 2104 GTAGGAAAAATGGTGATAGAAGAGAAGACAGAAATCAATGCAATGTAGTAGTTGAGAGAT 2163
|||||||||||||||||||||||||||| |||||||||||||||||| | | ||| |
Sbjct 2347 GTAGGAAAAATGGTGATAGAAGAGAAGAAAGAAATCAATGCAATGTA-T--T--AGA--T 2399
Query 2164 GTAAATGGTTGCCATATTaaaaaa-aaaa 2191
||||||||||| |||||||||||| ||||
Sbjct 2400 GTAAATGGTTGGCATATTAAAAAAGAAAA 2428
> AT5G10550.1 | Symbols: GTE2 | global transcription factor group
E2 | chr5:3332855-3335232 REVERSE LENGTH=2037
Length=2037
Score = 459 bits (248), Expect = 7e-128
Identities = 623/797 (78%), Gaps = 53/797 (7%)
Strand=Plus/Plus
Query 643 GTATGTTGAATACTTGTGGTCAAATCTTGGTGAAGCTGATGAAGCATAAATGGGCGTGGG 702
||||| ||| || |||||||| |||||||||||||||||||||||||||||| | ||||
Sbjct 743 GTATGATGACGACATGTGGTCAGATCTTGGTGAAGCTGATGAAGCATAAATGGTCATGGG 802
Query 703 TGTTC--AACACTCCTGTTGATGTGGTTGGTTTAGGGCTTCATGATTATCATCAGG-TTG 759
| || || | ||||||||||||||| ||||||||||||||||| ||||||| || |||
Sbjct 803 TCTTTTTAA-A-TCCTGTTGATGTGGTAGGTTTAGGGCTTCATGACTATCATC-GGATTG 859
Query 760 TGAAGAAACCTATGGATCTGGGTACGGTTAAGTTGAATCTTGATAAAGGGTT-T-TACGT 817
|| | || |||||||||||||||||||| ||| ||||||| || ||||| || | || |
Sbjct 860 TGGACAAGCCTATGGATCTGGGTACGGTGAAGATGAATCTGGAAAAAGGTTTATATA-GA 918
Query 818 TTCGCCGATTGATTTTGCTACTGATGTCAGATTGACATTCAACAATGCAATGACGTATAA 877
| ||||||||||||| ||| ||||||| || ||||| |||| |||||| ||| |||||||
Sbjct 919 T-CGCCGATTGATTTCGCTTCTGATGTTAGGTTGACTTTCACCAATGCGATGTCGTATAA 977
Query 878 TCCAAAGGGTCAAGATGTGTATTTTATGGCTGATAAGCTTTTG-GATCA-TTTCGATGGA 935
|||||||||||||||||| ||||| |||||||| |||||| || | ||| ||| || |
Sbjct 978 TCCAAAGGGTCAAGATGTTTATTTGATGGCTGAGAAGCTTCTGAG-TCAATTT-GACGTT 1035
Query 936 ATG-TTCAATCCTGCTTTTAAGAAGTTT-GAGGCTCA-GCAGCTTAAACTCACTGGT-TC 991
|| ||||| ||| | || |||| | || |||||||| | || | ||| | | ||| ||
Sbjct 1036 -TGGTTCAACCCTACATTGAAGA-GATTCGAGGCTCAAG-AGGTGAAAGTTA-TGGGATC 1091
Query 992 TTCATCTCGTCTTGAACCTGAGG-TCAAGCAAAGACAT-TGGAATCAGAATTCGCCAATG 1049
|| ||||||| || |||||||| | || |||||| | |||||||||||| ||||
Sbjct 1092 ATCGTCTCGTCCTGGACCTGAGGAT-AATCAAAGAG-TGTGGAATCAGAAT-----AATG 1144
Query 1050 GTGGC--A-AATCCTAGGAAAGGAACC-GAACAAATATCTATCGCGAAGAAGCTTGATTC 1105
|||| | ||| | ||||||||| || ||||| || ||||| || || ||||| |||||
Sbjct 1145 -TGGCGGAGAATGCAAGGAAAGGA-CCTGAACAGATTTCTATAGCTAAAAAGCTAGATTC 1202
Query 1106 AGTGAAGCCGCCACTACCTGCATTGCCTCCTCA---ATTAGTCGAGCCGTCGCGTGTTCA 1162
||||||||||| ||||||| |||||||||||| | || | ||| | |||| |
Sbjct 1203 AGTGAAGCCGCTACTACCTACATTGCCTCCTCCTCCAGTAATTGAGATAACACGTGACCC 1262
Query 1163 ATctccttctccaccacc--tcct-cctcctcctccGGTGGTTGAGCCTCAACTTCCGCA 1219
||||||| |||| |||| | | || || || || | | || | || || ||
Sbjct 1263 ATCTCCTCCTCCTTCACCGGTTCAGCCACCACCACCACCA-TC-A-CCAC--CTCCC-CA 1316
Query 1220 GCTGGTTATTGAAGTAGAAGCACCTCCTGATGTGAGTGACGTGACAAAAGG-AAGGAAGG 1278
|| ||||| |||| |||||| | | ||| ||| |||| || | |||| |||||| |
Sbjct 1317 GCCGGTTAACCAAGTGGAAGCATCACTTGAAGTGCGTGAAACGA-ATAAGGGAAGGAAAG 1375
Query 1279 GGAAGTTGCCGAAGCCTAAGGCTAAGGATCCAAATAAGAGGTTGATGACAATCGA-GCAG 1337
||||||| ||||| || ||||||||||||||||| ||| || |||||||| || | |
Sbjct 1376 GGAAGTTACCGAAACCGAAGGCTAAGGATCCAAACAAGCGGGAAATGACAATGGATGAA- 1434
Query 1338 AAGTCAAAGCTTGGTATGAATCTACAAGACTTACCTCCTGAGAAGCTTGGACAGTTGGTT 1397
||| ||||||||| ||||||||||||| || |||||||||||||||||||||||| ||
Sbjct 1435 AAGGGAAAGCTTGGCGTGAATCTACAAGAATTGCCTCCTGAGAAGCTTGGACAGTTGATT 1494
Query 1398 CAGATTCTCAGGAAGAG 1414
|||||||| ||||||||
Sbjct 1495 CAGATTCTTAGGAAGAG 1511
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 108684179925
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5