BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg497283
Length=2070
Score E
Sequences producing significant alignments: (Bits) Value
AT5G58930.1 | Symbols: | Protein of unknown function (DUF740) ... 2427 0.0
AT3G46990.1 | Symbols: | Protein of unknown function (DUF740) ... 619 3e-176
> AT5G58930.1 | Symbols: | Protein of unknown function (DUF740)
| chr5:23794315-23796461 REVERSE LENGTH=2147
Length=2147
Score = 2427 bits (1314), Expect = 0.0
Identities = 1787/1998 (89%), Gaps = 102/1998 (5%)
Strand=Plus/Plus
Query 134 aagaaataataaaatgtgagaaaaaggtttaaggaaagggaaa-ggaaaggGGAGTGTTT 192
|||||||||||||| | ||| |||||||||||||||||||||| || || | |||| ||
Sbjct 185 AAGAAATAATAAAACGAGAG-AAAAGGTTTAAGGAAAGGGAAAGGGTTAGTGTAGTG-TT 242
Query 193 GACAACG---C-C---Actctc-ttctcttcttcttctcGAGATCCTAAAAATGTCACTG 244
||||||| | | |||||| |||||||||||||||||||||||| ||||||| ||||
Sbjct 243 GACAACGCCACTCTTGACTCTCTTTCTCTTCTTCTTCTCGAGATCCTGAAAATGTGACTG 302
Query 245 ACAGATTCTTCAACTTCTTCACTC-TCTTCTTCCATTCACTGAACTGAATCCATCACCCT 303
||||||||||||||||| | ||| ||||||||||||||||||||| || ||| | ||||
Sbjct 303 ACAGATTCTTCAACTTC-ACTCTCTTCTTCTTCCATTCACTGAACTCAAACCA-CCCCCT 360
Query 304 GAGAGCTATGACCCACCAAACCCATCAGCGTCGTCGCCGTCGTCACTCCGCCGTCTGTCA 363
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 361 GTGAGCTATGACCCACCAAACCCATCAGCGTCGTCGCCGTCGTCACTCCGCCGTCTGTCA 420
Query 364 CCGTCATCCTACTTCCAAACCCACCACCGGTTTCTGTGCCACCTGTCTCCGTGAACGTCT 423
|||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 421 CCGTCATCCTTCTTCCAAACCCACCACTGGTTTCTGTGCCACCTGTCTCCGTGAACGTCT 480
Query 424 CTCCACCATCGAAGCTCTCTCTTCCTCTGTTTCAGCTTCCTCTGAGCTCCGCCGTGTTCG 483
||| |||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||
Sbjct 481 CTCTACCATCGAAGCTCTATCTTCCTCTGTCTCAGCTTCCACTGAGCTCCGCCGTGTTCG 540
Query 484 TTCCTACTCCGTTCGTGACGCATCCGCTTCTGCTTTGGACCAGCCACGACGCAGGTCGTG 543
|||||||| |||||||||||||||||||||| ||||||||||||||||||||| |||||
Sbjct 541 CTCCTACTCTGTTCGTGACGCATCCGCTTCTGTTTTGGACCAGCCACGACGCAGATCGTG 600
Query 544 TGATGTCAGGTC---T-A--ACGACG--G-TGATGATGAGCTGCTACAGAGCTCGATTCG 594
|||||| ||||| | | |||||| | |||||||||||||||| |||||||||||||
Sbjct 601 TGATGTTAGGTCTAATCACGACGACGATGATGATGATGAGCTGCTAAAGAGCTCGATTCG 660
Query 595 ATTCCCCATTGTACCGGATTTGAAAGAGGATGATGAAGAAGAAGAAGACGGAGAAGAAAT 654
||||||||||||||||||||||| ||| | ||| |||||||| ||||| |
Sbjct 661 ATTCCCCATTGTACCGGATTTGATAGA-G--GAT------GAAGAAGA---AGAAG--A- 705
Query 655 TAGAGGTTTTGATGATGGTAAG-AGACTCGTTGAAGAAGAAATCGAAGATGGAGAGCAGA 713
| || ||| | |||||| || ||||||||||||||||||||||||||||||||||
Sbjct 706 T-GA-----TGA-G--GGTAAGAAG-CTCGTTGAAGAAGAAATCGAAGATGGAGAGCAGA 755
Query 714 AGACGATGAAGGAGTTAATAGATCTGGAATCGAGAAATCAACAAATCAAGAAGAGCAATG 773
|||||||||||||||||||||||||||||||||||||||||| || | ||||| ||| |
Sbjct 756 AGACGATGAAGGAGTTAATAGATCTGGAATCGAGAAATCAAC-AA-C-TGAAGAACAACG 812
Query 774 GCAAAGATTCGGTTTTTAGCAGGACACTTAAGAAATTTTCACTCAAACATCATCTGAAGA 833
|||||||||||||||||||||| ||||| | ||| ||||||||||||||||||| ||
Sbjct 813 GCAAAGATTCGGTTTTTAGCAGAACACTCAGGAAGTTTTCACTCAAACATCATC----GA 868
Query 834 ATGGGAAAGTTCCAGATTCCGGGAACAGTCTCGGCCGTCGCTCATGTGATGTGGATCCTA 893
| ||| |||||||||||||||||||||| || ||||| ||||||||||| |||||||
Sbjct 869 A----AAA-TTCCAGATTCCGGGAACAGTCTTGGTCGTCGTTCATGTGATGTAGATCCTA 923
Query 894 GGTTGTCTCTCGACGCAAGTCGAATCTCGTTCGAGGAGCCTAGAGCTTCATGGGATGGAT 953
|||||||||| |||||| ||||| |||| ||||| |||||||||||||||||||||||||
Sbjct 924 GGTTGTCTCTTGACGCAGGTCGAGTCTCTTTCGACGAGCCTAGAGCTTCATGGGATGGAT 983
Query 954 GTTTGATTGGAAAGACATATCCAAAGCTGATTCCTTTGTCCTCTGTGACTGAAGATGTTA 1013
||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||
Sbjct 984 GTTTGATTGGAAAGACATATCCAAAGCTGATACCTTTGTCCTCTGTGACTGAAGACGTTA 1043
Query 1014 AAGCCTCGCCGGAGAAGATAACCGGTGAGAAAGAAGACGAAGAGGAGAAGAACAACCCAG 1073
||||||||||||||||||||||||||||||| | ||| ||||| ||||||||||| ||||
Sbjct 1044 AAGCCTCGCCGGAGAAGATAACCGGTGAGAAGGTAGAGGAAGATGAGAAGAACAATCCAG 1103
Query 1074 GTGGGACAGCTCAAACGAGGGATTACTACTTGGATTCACGGCGGAGGAGAAGCTTCGATC 1133
|||||||||||||||||||||||||||||||||||||||| |||| |||||||| ||||
Sbjct 1104 GTGGGACAGCTCAAACGAGGGATTACTACTTGGATTCACGAAGGAGAAGAAGCTTTGATC 1163
Query 1134 GATCATCGAGACATGGATTGCTTGAAGTTGATGAATTGAAAGCTATTTCGAATGCTAAGG 1193
|||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1164 GATCATCGAGACATGGTTTGCTTGAAGTTGATGAATTGAAAGCTATTTCTAATGCTAAGG 1223
Query 1194 TATCACCTGAAACTGTTGGTTTGTTTCATGGAGCGAAGTTGCTTGTTACGGAGAGGGAAC 1253
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1224 TATCACCTGAAACTGTTGGTTTGTTTCATGGAGCGAAGTTGCTTGTTACTGAGAGGGAAC 1283
Query 1254 TTAGGGATTCGAATTGGTATTCAATTAAAAATTACAAACCGGAGAGCTTGGAGTTAGGTT 1313
|||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||
Sbjct 1284 TTAGGGATTCGAATTGGTATTCTATTAAGAATTACAAACCGGAGAGCTTGGAGTTAGGTT 1343
Query 1314 CTAAAGTTGTTGGTTGTGTTGCTGCTGGTGAGGTGAAGAAGCAAGATGGTTTTGGGTTGA 1373
|||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1344 CTAAAGGTGTTGGTTGTGTTGCTGCTGGTGAGGTGAAGAAGCAGGATGGTTTTGGGTTGA 1403
Query 1374 AGAAGAGTGGGAAGAAATGGGGTAAAGGATGGAACTTTTGGGGATTGATTCAGAGGAAAA 1433
||||||| || ||||| ||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1404 AGAAGAGCGGAAAGAACTGGTCTAAAGGATGGAACTTTTGGGGATTGATTCAGAGGAAAA 1463
Query 1434 CCGATGTGGCCAAGAACGACATCAAAACCGAGCAAAGTTTGAAACTTGGAGGAAATGCAA 1493
| |||||||| |||||||| || ||||||||||||||||||||||||||||||||| | |
Sbjct 1464 CTGATGTGGCGAAGAACGAAATGAAAACCGAGCAAAGTTTGAAACTTGGAGGAAATACTA 1523
Query 1494 TGGAGGGTTCTCTAGCTGAGTCTCTGTTGAAGCTTAGGAGGGTGGCTAAAGGGGAAACCA 1553
||||||||||||| ||||||||| |||||||||||||||| ||||||||||| |||||||
Sbjct 1524 TGGAGGGTTCTCTTGCTGAGTCTTTGTTGAAGCTTAGGAGAGTGGCTAAAGGAGAAACCA 1583
Query 1554 ATGGTGATGTTAGCGAGAAACTCTTAAGAAGCTACAGCGTTAGTGCGAGAAAGTCCTGCG 1613
|||||||||| || ||||||||| ||||||| ||||||||||||||||||||||| || |
Sbjct 1584 ATGGTGATGTCAGTGAGAAACTCATAAGAAGTTACAGCGTTAGTGCGAGAAAGTCTTGTG 1643
Query 1614 ATGGTATGTTACGTGGTGCTTCTATTGTTAATGGATTTGAAGGTGGAAGAAGCTCTTGTG 1673
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1644 ATGGTATGTTACGTGGTGCTTCTATTGTTAATGGCTTTGAAGGTGGAAGAAGCTCTTGTG 1703
Query 1674 ATGGTCTGTTTCATGGCTCTATTACTGGTGTTGAGACCGGAAGAAGAAGCTCGTGTGAAG 1733
||||||| |||||||||||||| |||||||||||||| ||||||||||||| ||||||||
Sbjct 1704 ATGGTCTATTTCATGGCTCTATAACTGGTGTTGAGACTGGAAGAAGAAGCTTGTGTGAAG 1763
Query 1734 ACGGATTGTTTCATGGCGTTGAAGGCAAACGGAATCATCTTCTTCAGAGAGATGACAAGC 1793
||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct 1764 ACGGAATGTTTCATGGCGTTGAAGGCAAACGGAATCATCTTCTCCAGAGTGATGACAAGC 1823
Query 1794 TTGGGACTTACTCGCCGGACAACCTCAGAAATGGTATGGTTAGATTCTACTTGACGCCAT 1853
|||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1824 TTGGTACTTACTCGCCTGACAACCTCAGAAATGGTATGGTTAGATTCTACTTGACGCCAT 1883
Query 1854 TAAAAAGCCATACGACAAGCAACTCCGGTAAAACTAGGCTGATGAATTAATCAG-T-TC- 1910
|||| ||||||| ||||||||| |||||||||| ||||||||||||||| || | | ||
Sbjct 1884 TAAACAGCCATATGACAAGCAAGTCCGGTAAAAGTAGGCTGATGAATTAGTCTGATCTCT 1943
Query 1911 -ATGGTGGA---C-TG--G-A--AT-TG-AAACTGTGTTGTAATTACCA-TG----TT-T 1952
|| || | | || | | || | ||||||||||||||||| || | || |
Sbjct 1944 GATTGTTCAGTTCATGATGGACTATATTCAAACTGTGTTGTAATTAGCAATTACCCTTGT 2003
Query 1953 GT-T-ACTTATTA-TCCCATTGTTCTATAGATATATGAACTAAAATCATATC-CCAt--- 2005
|| | ||||||| ||||| ||||||||||||||||||||||||||||||| ||||
Sbjct 2004 GTGTTACTTATTTCTCCCACTGTTCTATAGATATATGAACTAAAATCATATGACCATGTT 2063
Query 2006 ---ct-t-t-ctttttc-tt--ct--tttt-ATGTGTATTAACGCTCTTAA-GAGTTCAA 2052
|| | | ||||||| || || |||| ||||||||||| |||||||| ||||||||
Sbjct 2064 GTTCTCTCTTCTTTTTCCTTTTCTACTTTTTATGTGTATTAATGCTCTTAAAGAGTTCAA 2123
Query 2053 TACAATGGTGATTTTGTT 2070
|||||| |||||||||||
Sbjct 2124 TACAATAGTGATTTTGTT 2141
Score = 122 bits (66), Expect = 1e-26
Identities = 73/76 (96%), Gaps = 2/76 (3%)
Strand=Plus/Plus
Query 1 TTGTACACTTTCTTCC-TTTGATTCTCTCTGCCACTCTCATGTGACACAATTATACAatt 59
|||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| |||
Sbjct 4 TTGTACAC-TTCTTCCTTTTGATTCTCTCTGCCACTCTCATGTGACACAATTATACCATT 62
Query 60 ttttctttgatatttt 75
||||||||||||||||
Sbjct 63 TTTTCTTTGATATTTT 78
> AT3G46990.1 | Symbols: | Protein of unknown function (DUF740)
| chr3:17311672-17313752 FORWARD LENGTH=2081
Length=2081
Score = 619 bits (335), Expect = 3e-176
Identities = 844/1077 (78%), Gaps = 86/1077 (8%)
Strand=Plus/Plus
Query 869 CGTCGCTCATGTGATGTGGATCCTAGGTTGTCTCTCGACGCAAGTCGAATCTCGTTCGAG 928
|||| ||| | ||||||||||||||| |||||| | || | | || | |||||||| |||
Sbjct 839 CGTCACTCTTCTGATGTGGATCCTAGATTGTCTTTTGATGGAGGTAGGATCTCGTTTGAG 898
Query 929 GAGCCTAGAG-CTTCATGGGATGGATGTTTGATTGGAAAGA-CATATCCA-AAGCTGATT 985
| ||||| | ||||||||||||| || |||||| |||| | ||||| || ||||| |
Sbjct 899 AAACCTAG-GTCTTCATGGGATGGTTGCTTGATT-GAAAAATCATAT-CACAAGCTTACG 955
Query 986 CCTTTGTCCT-CTGTGACTGAAGATGTTAAAGCCTCGCCGGAGAA-GATAACCGGTG-AG 1042
| |||| || ||||||| ||||||| ||||| || | || | | | || ||
Sbjct 956 ACATTGT-CTACTGTGACGGAAGATGCTAAAG-CT------A-AATG-T-GGTGTTGAAG 1004
Query 1043 AAAGAAGACGAAGAGGAG-A--AGAACAACCCAGGTGGGACAGCTCAAACGAGGGATTAC 1099
||||||| | ||||||| | |||| | ||||||||||| | |||||||| | | ||
Sbjct 1005 -AAGAAGAAGTAGAGGAGAAGGAGAAGAGTCCAGGTGGGACGGTTCAAACGAAGAACTAT 1063
Query 1100 TACTTGGATTCACGGCGGAGGAGAAG--CT--TCGATC-G-ATC-A-T-CGAGACATGGA 1150
|||| |||||| || ||||| || || | ||| || | || | | |||||| |||
Sbjct 1064 TACTCGGATTCTCGTCGGAGAAGGAGTTTTGATCGGTCGGTTTCGATTAAGAGACAAGGA 1123
Query 1151 TTGCTTGAAGTTGATGAATTGAAAGCTATTTCGAATGCTAAGGTATCACCTGAAACTGTT 1210
|||||||| ||||||||||||| || ||| |||||||| ||||||||||||||||||||
Sbjct 1124 TTGCTTGAGGTTGATGAATTGAGAGGTATATCGAATGCAAAGGTATCACCTGAAACTGTA 1183
Query 1211 GGTTTGTTTCATGGAGCGAAGTTGCTT-GTTACGGAGAGGGAACTTAGGGATTCGAATTG 1269
|||||||||||||| || ||||| || ||||| |||| |||||||||||||||||||||
Sbjct 1184 GGTTTGTTTCATGGTGCTAAGTT-ATTGGTTACAGAGAAGGAACTTAGGGATTCGAATTG 1242
Query 1270 GTATTCAATTAAAAAT-TACAAACCGGAGAGCT-TGGAGTTAGGTTCTAAA-G-TTG-TT 1324
|||||| ||||||||| | |||||| ||||| | || |||| ||||||| | | ||
Sbjct 1243 GTATTCGATTAAAAATGT-CAAACCAGAGAG-TAAAGAATTAGTTTCTAAAGGAAAGATT 1300
Query 1325 GGT-TGTGTTGCTGCTGGTGAGGTGAAGAAGCAAGATGGTTTTGGGTTGAAGAAGA-GTG 1382
|| | || ||||| |||||||| ||||||||| ||| || ||| ||| ||||| | |
Sbjct 1301 TGTAT-TGCTGCTGGTGGTGAGGGGAAGAAGCAGGATAGTGTTGAGTTAAAGAA-ACCTA 1358
Query 1383 GGAAGAAATGGGGTAAA-GGATGGAACTTTTGGGGATTGATTCAGAGGAAAACCGATGTG 1441
| ||||||| || ||| ||||||||| ||||||||||||| |||||||||| ||| |
Sbjct 1359 GAAAGAAAT-GGCCAAAGGGATGGAACATTTGGGGATTGATACAGAGGAAAAACGA---G 1414
Query 1442 GCCAAGAACGACATCAAA-ACCGAGCAAAGTTTGAAACTTGGAGGAAATGCAATGGAGGG 1500
|| |||||||| || ||| || ||||||| ||||||||||| ||||||||| | |||||
Sbjct 1415 GCGAAGAACGAGAT-AAAGACTGAGCAAATTTTGAAACTTGAAGGAAATGCGGTTGAGGG 1473
Query 1501 TTCTCTAGCTGAGTCTCTGTTGAAGCTTAGGAGGGT-GGCTAAAGGGGAAACCAATGGTG 1559
|||| | ||||| |||||||| ||||||||||| || || |||||| |||||||||| ||
Sbjct 1474 TTCTTTGGCTGAATCTCTGTTAAAGCTTAGGAGAGTAGG-TAAAGGAGAAACCAATGTTG 1532
Query 1560 ATGTTAGCGAGAAACTCTT-AAGAAGCTACAGCGTTAGTGCGAGAAAGTCCTGCGATGGT 1618
|||||| ||||| || || || |||||| || || |||||||||||||| ||||||||
Sbjct 1533 GTGTTAGTGAGAAGCTTTTGAA-AAGCTATAGTGTAAGTGCGAGAAAGTCTTGCGATGGC 1591
Query 1619 ATG-TTACGTGGTGCT-TCTATTGTTAATGGATTTGAAGGTGGAAGAAGCTCTTGTGATG 1676
|| || |||||||| | ||||| | ||| ||||||||||||||||||||||||||||
Sbjct 1592 GTGCGTA-GTGGTGCTAAC-ATTGTCAGTGGCTTTGAAGGTGGAAGAAGCTCTTGTGATG 1649
Query 1677 GTCTGTTTCATGGCTCTATTA-CTGGTGTTGAGACCGGAAGAAGAAGCTCGTGTGAAGAC 1735
||||||||||||| ||||||| | | ||||||| | ||||||| | ||| ||||| |
Sbjct 1650 GTCTGTTTCATGGATCTATTAACAG-TGTTGAGGCTGGAAGAA-A--CTCTTGTGATG-- 1703
Query 1736 GGATTGTTTCATGGCGTTGAAGGCAAACGGAATCATCTTCTTC---AGAGAGATGACAA- 1791
| |||| || ||||| |||||||||||| ||||||| ||||| ||||| | | |||
Sbjct 1704 G-ATTGGTTAATGGCATTGAAGGCAAACAAAATCATCATCTTCTCCAGAGAAACG-CAAA 1761
Query 1792 -GCTTGGGACTTACTCGCCG-GACAACCTC-AGAA-ATGGTATGGTTAGATTCTA-CTTG 1846
| |||| || | | ||| || ||||| |||| | | |||| |||||||||| || |
Sbjct 1762 TG-TTGGTACGTGCA-GCCAAGAAAACCTTGAGAAGA-G-TATGTTTAGATTCTATCT-G 1816
Query 1847 ACG-CCATTAAAAAGCCATACGACAAGCAACTCCGGTAAAACTAGGCTGATGAATTA 1902
| | || |||| ||||||| ||| ||||| ||||| || | |||||||| ||||||
Sbjct 1817 A-GTCCGGTAAAGAGCCATAAGACTAGCAAATCCGGGAAGAGTAGGCTGAAGAATTA 1872
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 102609913980
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5