BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg497292
Length=2646
Score E
Sequences producing significant alignments: (Bits) Value
AT1G71400.1 | Symbols: AtRLP12, RLP12 | receptor like protein 1... 3341 0.0
AT1G71390.1 | Symbols: AtRLP11, RLP11 | receptor like protein 1... 1509 0.0
AT3G05360.1 | Symbols: AtRLP30, RLP30 | receptor like protein 3... 65.8 2e-09
> AT1G71400.1 | Symbols: AtRLP12, RLP12 | receptor like protein
12 | chr1:26909835-26912597 FORWARD LENGTH=2763
Length=2763
Score = 3341 bits (1809), Expect = 0.0
Identities = 2342/2594 (90%), Gaps = 57/2594 (2%)
Strand=Plus/Plus
Query 1 TTCTTCTTAAAGTGAGGACCAAATGAAGCACACACAATTCATTACTTACAAGACAAAATC 60
|||||||||||| ||| ||| | |||| ||||||||||| |||| || | |||| ||
Sbjct 1 TTCTTCTTAAAGAGAGAACC-ACTGAA--TCACACAATTCAGTACTCACTACACAATCTC 57
Query 61 AAAACAGAAAGATATGATGATCCGAAGCCATTGTCATTGGG---TTTCT-GACATTATTA 116
||||||||||||||||||||||||||||||| ||||||||| ||||| | | |||||
Sbjct 58 AAAACAGAAAGATATGATGATCCGAAGCCATCGTCATTGGGTTTTTTCTAGTC-GTATTA 116
Query 117 TCATCTTTTTCTTCCTCCTTGTACACTCTCTAGCTTCTTCTTCGCCCCACTTTTGCCGTC 176
|||||||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 117 TCATCTTTCTCTCCCTCCTTGTTCACTCTCTAGCTTCTTCTTCGCCCCACTTTTGCCGTG 176
Query 177 ATGACCAGAGAGATGCTCTTTTGGAATTCAGAGGCGAGTTTCCGATAGATGCCTCTTTGA 236
||||||||||||||||||||||||||||||||||||||||||||||| |||| || | |
Sbjct 177 ATGACCAGAGAGATGCTCTTTTGGAATTCAGAGGCGAGTTTCCGATAAATGCGTCATGGC 236
Query 237 AAATTATGAATAC-ATGGAGAGGTCCGTGGAATAAGAGCACTGATTGTTGTTTTTGGAAC 295
| ||||||||| | ||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 237 ATATTATGAAT-CAATGGAGAGGTCCGTGGAATAAGAGCACTGATTGTTGTCTTTGGAAT 295
Query 296 GGAGTCACATGCGATGATAAATCTGGTCAGGTAATATCACTCGACCTTCCTAACACCTTT 355
|||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 296 GGAGTCACTTGCAATGATAAATCTGGTCAGGTAATATCACTCGACATTCCTAACACCTTT 355
Query 356 CTCCACGGCTATTTGAAAACCAACAGTAGCCTTTTTAAACTCCAATATCTTCGTCACCTA 415
||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 356 CTCAACAACTATTTGAAAACCAACAGTAGCCTTTTTAAACTCCAATATCTTCGTCACCTA 415
Query 416 AACCTTA-GTAATTGCAATCTCAAAGGAGAGATTCCTTCTTCACTAGGAAACCTTTCTCA 474
|||||| | |||||||||||| | |||||||||||||||||||||||||||||||||||
Sbjct 416 GACCTTACG-AATTGCAATCTCTACGGAGAGATTCCTTCTTCACTAGGAAACCTTTCTCA 474
Query 475 TCTCACACTTGTTAACCTTTTCTTTAATCAA-TTGGTAGGAGAAATTCCGGCTTCAATCG 533
|||||||||||||||||||| ||||||| || || || ||||||||||||||||||||||
Sbjct 475 TCTCACACTTGTTAACCTTTACTTTAAT-AAGTTTGTTGGAGAAATTCCGGCTTCAATCG 533
Query 534 GCAATCTAAACCAGCTAAGATACCTTAACCTTCAG-T-CTAACGAT-CTCACAGGAGAGA 590
|||||||||||||||| ||| |||||| |||| | | ||||| | || ||||||||||
Sbjct 534 GCAATCTAAACCAGCTTAGACACCTTATCCTT--GCTAATAACG-TCCTTACAGGAGAGA 590
Query 591 TTCCTTCTTCACTAGGAAACCTTTCTCGTCTC--ACA-TTTGTTAGCCTAGCTGATAATA 647
|||||||||||||||||||||||||||||||| | | ||| || || | |||||
Sbjct 591 TTCCTTCTTCACTAGGAAACCTTTCTCGTCTCGTAAACCTTG--AG-CTTTTTTCTAATA 647
Query 648 TCTTGGTAGGTAAGATTCCAGATTCATTAGGAAATCTAAAGCATCTAAGAAACCTTAGTC 707
||||| |||||||||||||||||| ||||| |||||||||| |||||||||||||| |
Sbjct 648 GATTGGTTGGTAAGATTCCAGATTCAATAGGAGATCTAAAGCAGCTAAGAAACCTTAGCC 707
Query 708 TTGGGTCTAACGATCTCACAGGAGAGATTCCTTCTTCAC-TAGGAAACCTTTCTAATCTT 766
||| ||||||| |||||| ||| |||||||||||||| | |||||||||||||||||||
Sbjct 708 TTGCGTCTAACAATCTCATAGGCGAGATTCCTTCTTC-CTTAGGAAACCTTTCTAATCTC 766
Query 767 ATACATCTTGCACTTATGCATAATCAATTGGTAGGTGAAGTTCCTGCCTCCATTGGAAAT 826
||||||||| |||| |||||||||||||||||||||||||||||||||||| ||||||
Sbjct 767 GTACATCTTGTTCTTACGCATAATCAATTGGTAGGTGAAGTTCCTGCCTCCATAGGAAAT 826
Query 827 CTAAACGAACTAAGAGCTATGTCATTTGAAAACAATAGCTTAAGTGGAAATATTCCTATT 886
|||| ||||||||||| |||||||||||||||||||||||||||||| || |||||||||
Sbjct 827 CTAATCGAACTAAGAGTTATGTCATTTGAAAACAATAGCTTAAGTGGCAACATTCCTATT 886
Query 887 TCCTTTGCCAATTTAACCAAGCTTTCTGA-ATTTGTCCTCAGCTCTAATAACTTCACATC 945
||||| ||||||||||| ||||||||| | ||||||||||||||||||||||||||||||
Sbjct 887 TCCTTCGCCAATTTAACAAAGCTTTCT-ATATTTGTCCTCAGCTCTAATAACTTCACATC 945
Query 946 CACGTTTCCGTTTGACATGAGTCTATTCCACAACTTGGTGTACTTTGATGCTTCTCAAAA 1005
||||||||| |||||||||||| ||||||||||||||| ||||||||||| |||| | ||
Sbjct 946 CACGTTTCCATTTGACATGAGTATATTCCACAACTTGGAGTACTTTGATGTTTCTTATAA 1005
Query 1006 CTCTTTTAGCGGACCTTTCCCTAAATCTTTGTTCTTGATAACTTCGTTACAAGATGTTTA 1065
||| |||||||| ||||| ||||||||| |||| ||||| |||| ||| || | ||||
Sbjct 1006 CTCATTTAGCGGGCCTTTTCCTAAATCTCTGTTATTGATTCCTTCCTTAGAATCTATTTA 1065
Query 1066 TCTGGC-AGATAACCAATTTACGGGACCTATAGAGTTTGCAAATACATCTTCATCAAATA 1124
||| || ||| |||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1066 TCT-GCAAGAAAACCAATTTACGGGACCTATAGAGTTTGCAAATACATCTTCATCAACTA 1124
Query 1125 AGCTTCAGTCCCTAACCCTTGCTCGTAACAGACTTGATGGCCCAATCCCGGAATCCATAT 1184
|||||||| ||||| ||||| |||||||||||| ||||||||||||||||||| ||||
Sbjct 1125 AGCTTCAGGACCTAATCCTTGGTCGTAACAGACTCCATGGCCCAATCCCGGAATCTATAT 1184
Query 1185 CTAAATTTCTCAACCTTGAAGATTTAGATCTTAGCCACAACAACTTCACTGGGGCAATCC 1244
||| | |||||||||||||||| ||||| | |||||||||||||| |||||||||||||
Sbjct 1185 CTAGACTTCTCAACCTTGAAGAGCTAGATATCAGCCACAACAACTTTACTGGGGCAATCC 1244
Query 1245 CTACATCTATATCAAAGCTAGTCAACCTCCTTTATCTTGATCTTTCCAACAACAATTTGG 1304
|| || |||||||||||||||||||||||||| |||||||||||||||| ||||||||||
Sbjct 1245 CTCCAACTATATCAAAGCTAGTCAACCTCCTTCATCTTGATCTTTCCAAGAACAATTTGG 1304
Query 1305 AAGGTGAAGTACCAGGTTGCTTATGGAGAATGAGTACGGTGGCGCTTTCTCACAATAT-T 1363
||||||||||||||| ||||||||||||| ||| ||| ||| ||||||||||||| | |
Sbjct 1305 AAGGTGAAGTACCAGCTTGCTTATGGAGATTGAATACAATGGTGCTTTCTCACAAT-TCT 1363
Query 1364 TTCA-CAAGTTTTGAAAACTCTT--C-ATATGAAGCACTAATAGAAGAGTTGGATCTGAA 1419
|||| | |||||||||||| ||| | | | |||||||| || |||||||||||| ||||
Sbjct 1364 TTCAGC-AGTTTTGAAAACACTTCACAAGAGGAAGCACTGATCGAAGAGTTGGATTTGAA 1422
Query 1420 TTCCAATTCATTTCAAGGACCACTTCCTCATATGATCTGCAAGCTTAGATCGTTACGCTT 1479
||| |||||||| ||||||||| ||||| ||||||||||||||||||| |||||| ||||
Sbjct 1423 TTCAAATTCATTCCAAGGACCAATTCCTTATATGATCTGCAAGCTTAGTTCGTTAGGCTT 1482
Query 1480 TTTAGATCTGTCCAACAATCTCTTCAGCGGCTCAATTCCTTCATGTATAAGGAATTTCAG 1539
| ||||| ||||||||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct 1483 TCTAGATTTGTCCAACAATCTCTTCAGCGGCTCGATTCCTTCATGTATAAGGAACTTCAG 1542
Query 1540 TGGTTCTATTAAAGAGCTAAATAT-GGGGAGCAACAACTTCAGTGGAACTCTTCCAGATA 1598
|||||||||||||||||||||| | ||||| |||||||||||||||||||||||||||||
Sbjct 1543 TGGTTCTATTAAAGAGCTAAATTTGGGGGA-CAACAACTTCAGTGGAACTCTTCCAGATA 1601
Query 1599 TATTTTCCAAAGCTACCGAGTTAGTATCAATGGACGTTAGTCGCAACCAGCTGGAGGGAA 1658
|||||||||||||||||||||| |||||| | |||||||||| |||||||||||||||||
Sbjct 1602 TATTTTCCAAAGCTACCGAGTTGGTATCATTAGACGTTAGTCACAACCAGCTGGAGGGAA 1661
Query 1659 AGTTGCCAAAGTCTTTGATCAATTGCAAAGCTCTGCAACTTGTGAATATAAAAAGCAACA 1718
|||| ||||||||||||||||||||||||||| || ||||||||||| | |||||||||
Sbjct 1662 AGTTTCCAAAGTCTTTGATCAATTGCAAAGCTTTGGAACTTGTGAATGTGGAAAGCAACA 1721
Query 1719 AAATCAAGGACA-ATTTCCCATCATGGTTGGAATCTCTACCGTCATTACATGTCCTCAAC 1777
|||||||||| | |||||| ||||||||||||||||||||||||||||||||| ||||||
Sbjct 1722 AAATCAAGGATATATTTCC-ATCATGGTTGGAATCTCTACCGTCATTACATGTTCTCAAC 1780
Query 1778 CTCGGATCAAACGAGTTCTATGGGCCGTTGTATCATCACCACATG--TCTATTGGGTTTC 1835
||| |||||||| |||||||||||||||||||||||| ||||| |||||||||||||
Sbjct 1781 CTCAGATCAAACAAGTTCTATGGGCCGTTGTATCATCG--ACATGCATCTATTGGGTTTC 1838
Query 1836 AGAGTTTAAG-AGTCATCGATATATCAGACAATGACTTCACTGGAACTCTCCCACCTCAC 1894
|||||||||| | |||||||||||||| ||||| |||||| |||||||||||||||| ||
Sbjct 1839 AGAGTTTAAGGA-TCATCGATATATCACACAATAACTTCAGTGGAACTCTCCCACCTTAC 1897
Query 1895 TATTTCTCCAACTGGAAAGAAATGATCACATTAACGGAAGAAATGGACGAGTACATGACA 1954
||||| |||||||||||||| |||| ||||||||| |||||||||||| |||||||||||
Sbjct 1898 TATTTTTCCAACTGGAAAGACATGACCACATTAACAGAAGAAATGGACCAGTACATGACA 1957
Query 1955 GAGTTTTGGAGATATGCTGATAGCTATTATCATGAGATGGAAATGGTGAATAAAGGAGTT 2014
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1958 GAGTTTTGGAGATATGCTGATAGCTATTACCATGAGATGGAAATGGTGAATAAAGGAGTT 2017
Query 2015 GATATGAGCTTCGAGCGGATCCGAAAAGACTTCAGAGCCATTGATTTTTCTGGAAACAAA 2074
||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 2018 GATATGAGCTTTGAGCGGATCCGAAGAGACTTCAGAGCCATTGATTTTTCTGGAAACAAA 2077
Query 2075 ATCTATGGCAGCATCCCTAGA-TCCCTTGGCTTTTTGAAGGAACTGCGCCTTCTCAATTT 2133
||| |||| | |||||| || |||||||||| |||||| |||||||| ||||||| ||
Sbjct 2078 ATCAATGGTAATATCCCT-GAATCCCTTGGCTATTTGAAAGAACTGCGGGTTCTCAACTT 2136
Query 2134 GTCAGGTAACGCTTTCTCAAGCGAT-ATCCCACGTTTCTTGGCAAATTTGACAAAGCTCG 2192
|||||||||||| ||| |||||| | |||||||| |||||||| |||||||||||||| |
Sbjct 2137 GTCAGGTAACGCATTCACAAGCG-TCATCCCACGATTCTTGGCGAATTTGACAAAGCTGG 2195
Query 2193 AGACGTTAGACCTATCCCGTAATAAGCTGTCAGGTCAAATCCCTCAAGATCTTGGTAAAC 2252
|||| |||||| |||||||||||||||||||||||||||||||||||||||||| | ||
Sbjct 2196 AGACATTAGACATATCCCGTAATAAGCTGTCAGGTCAAATCCCTCAAGATCTTGCTGCAC 2255
Query 2253 TCTCTTTTCTGTCATACATGAACTTCTCCCATAACCTTCTCCAAGGTCCTGTGCCACGAG 2312
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 2256 TCTCTTTTCTGTCATACATGAACTTCTCCCATAACCTTCTCCAAGGTCCAGTGCCACGAG 2315
Query 2313 GCACACAGTTTCAAAGGCAAAAATGTTCTTCATTCTTGGACAACCCTAAACTCTACGGTC 2372
||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||
Sbjct 2316 GCACACAGTTTCAAAGGCAGAAATGTTCTTCATTCTTGGACAACCCTGGACTCTACGGTC 2375
Query 2373 TCGAAGAAATCTGT-GGAGAAACTCATGCCTTGAATCCTACATCGCAACTACCCGAGGAA 2431
||||||| || ||| || || ||| ||||||||||||||||||||| |||||||||||
Sbjct 2376 TCGAAGATATTTGTAGG-GATACTGGTGCCTTGAATCCTACATCGCAGCTACCCGAGGAC 2434
Query 2432 TTGTCAGAGGCTGAGGAGAAA-ATGTTCAACTGGGTAGCAGCTGCAATAGCTTATGGACC 2490
||||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||
Sbjct 2435 TTGTCAGAGGCTGAGGA-AAACATGTTCAACTGGGTAGCAGCTGCAATAGCCTATGGACC 2493
Query 2491 TGGTGTGTTATGTGGATTGGTGATCGGACATATCTTCACTTCACACAATCATGAGTGGTT 2550
||| ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||
Sbjct 2494 TGGCGTGTTATGTGGATTGGTGATCGGACATTTCTACACTTCACACAATCATGAGTGGTT 2553
Query 2551 CACAGAAATGTTTG 2564
|||||||| |||||
Sbjct 2554 CACAGAAAAGTTTG 2567
Score = 165 bits (89), Expect = 2e-39
Identities = 211/264 (80%), Gaps = 32/264 (12%)
Strand=Plus/Plus
Query 439 AGGAGAGATTCCTTCTTCACTAGGAAACCTTTCTCATCTC--ACAC-TTGTTAACCTTTT 495
||||||||||||||||||||||||||||||||||| |||| | || ||| | | ||||
Sbjct 583 AGGAGAGATTCCTTCTTCACTAGGAAACCTTTCTCGTCTCGTAAACCTTG--AGC-TTTT 639
Query 496 CTT-TAATCA-ATTGGTAGGAGAA-ATTCCGGCTTCAATCGGCA-ATCTAAACCAGCTAA 551
|| |||| | |||||| || || ||||| | |||||| || | ||||||| |||||||
Sbjct 640 -TTCTAAT-AGATTGGTTGGT-AAGATTCCAGATTCAATAGG-AGATCTAAAGCAGCTAA 695
Query 552 GATACCTTAACCTT-CAGTCTAACGATCTCACAGGAGAGATTCCTTCTTCACT-AGGAAA 609
|| |||||| |||| | ||||||| |||||| ||| |||||||||||||| || ||||||
Sbjct 696 GAAACCTTAGCCTTGC-GTCTAACAATCTCATAGGCGAGATTCCTTCTTC-CTTAGGAAA 753
Query 610 CCTTTCTCGTCTC--ACAT-TTGTTAGCCTA-GCTGATAAT-ATCTTGGTAGGT-AAGAT 663
||||||| |||| |||| ||||| | || || ||||| | ||||||||| ||| |
Sbjct 754 CCTTTCTAATCTCGTACATCTTGTT--CTTACGC--ATAATCAA-TTGGTAGGTGAAG-T 807
Query 664 TCCAGATTC-ATTAGGAAATCTAA 686
||| | || || |||||||||||
Sbjct 808 TCCTGCCTCCAT-AGGAAATCTAA 830
Score = 154 bits (83), Expect = 4e-36
Identities = 217/278 (78%), Gaps = 24/278 (9%)
Strand=Plus/Plus
Query 576 ATCTC-ACAGGAGAGATTCCTTCTTCACTAGGAAACCTTTCTCGTCTCACATTTGTTAGC 634
||||| || |||||||||||||||||||||||||||||||||| ||||||| |||||| |
Sbjct 432 ATCTCTAC-GGAGAGATTCCTTCTTCACTAGGAAACCTTTCTCATCTCACACTTGTTAAC 490
Query 635 C--TAGCTGATAATATCTTGGTAGGTA-AGATTCCAGATTCATTAGGAAATCTAAAGCAT 691
| || || ||||| || || || | | ||||| | |||| | || |||||||| ||
Sbjct 491 CTTTA-CT-TTAATAAGTTTGTTGG-AGAAATTCCGGCTTCAATCGGCAATCTAAACCAG 547
Query 692 CTAAGAAACCTTAGT-CTTGGGT-CTAACGAT-CTCACAGGAGAGATTCCTTCTTCACTA 748
|| ||| |||||| | ||| | | ||||| | || ||||||||||||||||||||||||
Sbjct 548 CTTAGACACCTTA-TCCTT-GCTAATAACG-TCCTTACAGGAGAGATTCCTTCTTCACTA 604
Query 749 GGAAACCTTTCTAATCTTATACATCTTGCA-CTTATG-CATAATCA-ATTGGTAGGTGAA 805
|||||||||||| ||| || | |||| | ||| | | |||| | |||||| ||| ||
Sbjct 605 GGAAACCTTTCTCGTCTCGTAAACCTTG-AGCTTTTTTC-TAAT-AGATTGGTTGGT-AA 660
Query 806 G-TTCCTGCCTCCATTGGAAATCTAAACGAA-CTAAGA 841
| |||| | || || ||| ||||||| | | ||||||
Sbjct 661 GATTCCAGATTCAATAGGAGATCTAAA-GCAGCTAAGA 697
Score = 71.3 bits (38), Expect = 5e-11
Identities = 92/117 (79%), Gaps = 8/117 (7%)
Strand=Plus/Plus
Query 720 ATCTC-ACAGGAGAGATTCCTTCTTCACTAGGAAACCTTTCTAATCTTATACATCTTGCA 778
||||| || ||||||||||||||||||||||||||||||||| |||| | || | || |
Sbjct 432 ATCTCTAC-GGAGAGATTCCTTCTTCACTAGGAAACCTTTCTCATCTCACACTTGTTA-A 489
Query 779 C-TTATGCAT-AATCAA-TTGGTAGGTGAAGTTCCTGCCTCCATTGGAAATCTAAAC 832
| || | | | ||| || || || || ||| |||| || || || || |||||||||
Sbjct 490 CCTT-TACTTTAAT-AAGTTTGTTGGAGAAATTCCGGCTTCAATCGGCAATCTAAAC 544
> AT1G71390.1 | Symbols: AtRLP11, RLP11 | receptor like protein
11 | chr1:26906453-26908807 FORWARD LENGTH=2355
Length=2355
Score = 1509 bits (817), Expect = 0.0
Identities = 1650/2039 (81%), Gaps = 109/2039 (5%)
Strand=Plus/Plus
Query 576 ATCTCACA-GGAGAGATTCCTTCTTCACTAGGAAACCTTTCTCGTCTC--ACAT-TTGTT 631
||||| || |||||||||||||||||||||||||||||||| |||||| | || |||
Sbjct 338 ATCTC-CATGGAGAGATTCCTTCTTCACTAGGAAACCTTTCCCGTCTCGAAAATCTTG-- 394
Query 632 AGCCTAGCTGATAATATCTTGGTAGGTAAGATTCCAG-ATTCATTAGGAAATCTAAAGCA 690
|| || || ||||| ||||| ||| ||||||| | ||||| |||| || ||||||||
Sbjct 395 AG-CTTTCTTCTAATAGATTGGTCGGTGAGATTCC-GTATTCAATAGGGAACCTAAAGCA 452
Query 691 TCTAAGAAACCTTAGTCTTGGGTCTAACGATCTCACAGGAGAGATTCCTTCTTCACTAGG 750
|||||||||||||| |||||| ||||||||||| |||||| ||||||||||| |||||
Sbjct 453 ACTAAGAAACCTTAGCCTTGGGGATAACGATCTCATAGGAGAAATTCCTTCTTCCCTAGG 512
Query 751 AAACCTTTCTAATCT-TATACATCTTGCA-CTTAT-GCATAA-TCAATTGGTAGGTGAAG 806
|||||||||| ||| | || |||||| | ||| | | |||| || |||||||||||||
Sbjct 513 AAACCTTTCTCTTCTCT-TAGATCTTG-ACCTT-TGGAATAATTC-TTTGGTAGGTGAAG 568
Query 807 TTCCTGCCTCCATTGGAAATCTAAACGAACTAAGAGCT-ATGTCATTTGAAAACAATAGC 865
|||| || ||||| ||||| |||||||||||||||| | |||||| |||| || |||
Sbjct 569 TTCCAGCTTCCATCGGAAACCTAAACGAACTAAGAG-TCATGTCACTTGACCGTAACAGC 627
Query 866 TTAAGTGGAAATATTCCTATTTCCTTTGCCAATTTAACCAAGCTTTCTGAATTT-GTCCT 924
|||||||| | ||| |||||||| ||| | || |||||||| ||||| || ||| | |
Sbjct 628 TTAAGTGGCAGTATACCTATTTCATTTACTAACTTAACCAAACTTTCCGAGTTTAG-AAT 686
Query 925 CAGCTCTAATAACTTCACATCCACGTTTCCGTT-TGACATGAGTCTATTCCACAACTTGG 983
| || ||| |||||||||||| | |||| || |||| ||||| |||||||||||||
Sbjct 687 CTTCTTTAACAACTTCACATCC-C--TTCC-TTCTGACCTGAGTGGCTTCCACAACTTGG 742
Query 984 TGTAC-TTTGATGCTT-CT-CAAAACTC-TTTTAGCGGACCTTTCCCTAAATCTTTGTTC 1039
|| || |||||| || | | |||||| |||| ||| | ||||||||||| |||||||
Sbjct 743 TG-ACGTTTGAT-ATTAGTGC-AAACTCATTTT-CCGGGCATTTCCCTAAATTTTTGTTC 798
Query 1040 TTGATAACTTCGTTA-CAAGATGTTTATCTGG-CAGATAACCAATT-TACGGGACCTATA 1096
| ||| |||||||| || | |||| | ||| ||| |||||||| | | |||||||||
Sbjct 799 TCGATTCCTTCGTTAGCATG-GGTTTCTATGGATAGA-AACCAATTCT-CAGGACCTATA 855
Query 1097 GAGTTTGCAAATACATCTTCATCAAATAAGCTTCAGTCCCTAACCCTTGCTCGTAACAGA 1156
|||||||| |||| |||||||||| |||||||||| |||| ||| ||||||||| |
Sbjct 856 GAGTTTGCTAATATATCTTCATCATCTAAGCTTCAGAATCTAATCCTCACTCGTAACA-A 914
Query 1157 CTT-GATGGCCCAATCCCGGAATCCATATCTAAATTTCTCAACCTTGAAGAT-TTAGATC 1214
|| |||||| ||||||| |||||||||||||| ||||||||||| | | | ||||||
Sbjct 915 ATTAGATGGCTCAATCCCTGAATCCATATCTAAGTTTCTCAACCTCGTA-CTGTTAGATG 973
Query 1215 TTAG-CCACAACAACT-TCACTGGGGCAATCCCTACATCTATATCAAAGCTAGTCAACCT 1272
|| | |||||| || | ||| ||| || |||||| ||||| |||||| |||| | |||
Sbjct 974 TT-GCCCACAATAA-TATCAGTGGACCAGTCCCTAGGTCTATGTCAAAGTTAGTTAGCCT 1031
Query 1273 CCTTTATC-TTGATCTTTCCAACAACAATTTGGAAGGTGAAGTACCAGGTTGCTTATGGA 1331
|| |||| ||| | ||||||||||||| |||||||||||||||||| |||| || ||||
Sbjct 1032 CC-GTATCTTTGGTTTTTCCAACAACAAGTTGGAAGGTGAAGTACCAAGTTGGTTGTGGA 1090
Query 1332 GAATGAGTACGGTGGCGCTTTCTCACAATAT-TTTCA-CAAGTTTTG--AAAA-CTCTTC 1386
|| || | | ||||||||||||| | ||||| | ||||||| |||| | |||
Sbjct 1091 GATTGTCTTCAACAATGCTTTCTCACAAT-TCTTTCAGC-AGTTTTGAAAAAATATATTC 1148
Query 1387 ATATGAAGCACTAATAGAAGAGTTGGATCTGAA-TTCCAATTCATTTC-AAGGACCACTT 1444
| | ||| || | || ||| ||||||||| || || |||||| || | | ||| | ||
Sbjct 1149 AAAAGAAACAATGATCCAAGTGTTGGATCT-AAGTTTCAATTCCTTCCGAGGGA-CGTTT 1206
Query 1445 CCTCATAT-GATCTGCAAGCTTAGATCGTTACGCTTTTTAGATCTGTCCAACAATCTCTT 1503
|| | | | |||||||||||| | | ||||| ||| |||||| ||||||||||||||||
Sbjct 1207 CC-CGTTTGGATCTGCAAGCTGAAAGGGTTACACTTCTTAGATTTGTCCAACAATCTCTT 1265
Query 1504 CAGCGGCTCAATTCCTTCATGTATAAGGAATTTCAGTGGTTCTATTAAAGAGCTAAATAT 1563
|| ||| || ||||||| |||| ||||||| |||| || ||| | ||||| | |
Sbjct 1266 CAACGGTTCGATTCCTTTATGTTTAAGGAACTTCA----ATC--TTACGGGGCTAATTCT 1319
Query 1564 GGGGAGCAACAACTTCAGTGGAACTCTTCCAGATATATTTTCCAA-AGCTACCGAGTTAG 1622
|| | |||||| ||||||||||||||||| || |||||| |||| | |||| | |||
Sbjct 1320 TGGAAACAACAAGTTCAGTGGAACTCTTCCGGACATATTTGCCAATA-ATACCAACTTAC 1378
Query 1623 TATCAATGGACGTTAGTCGCAACCAGCTGGAGGGAAAGTTGCCAAAGTCTTTGATCAATT 1682
|||| ||||||| ||| |||||||| | ||||| ||||| |||||||||||||| ||||
Sbjct 1379 AATCATTGGACGTAAGTGGCAACCAGTTAGAGGGGAAGTTTCCAAAGTCTTTGATAAATT 1438
Query 1683 GCAAAGCTCTGCAACTTGTGAATATAAAAAGCAACAAAATCAAGGACA-ATTTCCCATCA 1741
|||||| | |||| |||||||| | ||||||||||||||||||| | ||| |||||
Sbjct 1439 GCAAAGGTTTGCATTTTGTGAATGTTGAAAGCAACAAAATCAAGGATACGTTT-CCATCT 1497
Query 1742 TGGTTGGAATCTCTACCGTCATTACATGTCCTCAACCTCGGATCAAACGAGTTCTATGGG 1801
||||||| ||||||||| || ||||| || |||| ||| |||||||||| ||||||||
Sbjct 1498 TGGTTGGGATCTCTACCATCTTTACAAGTTCTCATCCTAAGATCAAACGACTTCTATGGT 1557
Query 1802 CCGTTGTATCATCACCA-CATGTCTATTGGGTTTC-AGAGTTTAAGAGTCATCGATATAT 1859
||||||||||||| ||| |||||| |||||||||| || |||||||| ||||||||||||
Sbjct 1558 CCGTTGTATCATC-CCAGCATGTCCATTGGGTTTCAAG-GTTTAAGAATCATCGATATAT 1615
Query 1860 CAGACAATGACTTCACTGGAACT-CTCCCACCTCACTATTTCTCCAACTGGAAAGAAATG 1918
|| |||||| |||| |||| | | ||||||||| ||| ||| || | ||| ||||||
Sbjct 1616 CACACAATGGCTTCTCTGG-AGTACTCCCACCTAACTTTTTTTCTAGTTGGCGTGAAATG 1674
Query 1919 ATCACATTA----ACGGAAGAAATGGACGAGTACA-TGACAGAGT-TTTGGAGA-TATGC 1971
|| |||||| | ||||| || || | |||| ||| ||| | || || | ||| |
Sbjct 1675 ATTACATTAGTCCATGGAAGTTAT-GA--A-TACATTGA-AGA-TATTCAGA-ATTATTC 1727
Query 1972 TGATAGCTATTATCATGAGATGGAAATGGTGAATAAAGGAGTTGATATGAGCTTCGAGCG 2031
| || ||| | | | ||||||||||||||||||||||| || ||||| || ||| |
Sbjct 1728 TCTTATCTA-TCGC-T-CCATGGAAATGGTGAATAAAGGAGTAGAGATGAGTTTTGAGAG 1784
Query 2032 GATCCGAAAAGACTTCAGAGCCATTGATTTTTCTGGAAACAAAATCTATGGCAG-CATCC 2090
||||||| ||||||| ||||||||||||||||||| ||||| ||| |||||| | || |
Sbjct 1785 GATCCGACAAGACTTTAGAGCCATTGATTTTTCTGAAAACAGAATTTATGGC-GAAATAC 1843
Query 2091 CTAG-ATCCCTTGGCTT-TTTGAAGGAACTGCGCCTTCTCAATTTGTCAGGTAACGCTTT 2148
|| | |||| |||| || |||| |||||||||| |||||||| |||||||||||||||||
Sbjct 1844 CT-GAATCCATTGG-TTGTTTGGAGGAACTGCGTCTTCTCAACTTGTCAGGTAACGCTTT 1901
Query 2149 CTCAAGCGATATCCCACGTTTCTTGGCAAATTTGACAAAGCTCGAGACGTTAGACCTATC 2208
| |||||||||||||||| ||| || |||| | ||||||||||||||||||||||||||
Sbjct 1902 CACAAGCGATATCCCACGGGTCTGGGAAAATCTCACAAAGCTCGAGACGTTAGACCTATC 1961
Query 2209 CCGTAATAAGCTGTCAGGTCAAATCCCTCAAGATCTTGGTAAACTCTCTTTTCTGTCATA 2268
||||| ||| |||| ||||||||||| |||||||||||||||||||| |||||||| ||
Sbjct 1962 ACGTAACAAGTTGTCTGGTCAAATCCCACAAGATCTTGGTAAACTCTCCTTTCTGTCGTA 2021
Query 2269 CATGAACTTCTCCCATAACCTTCTCCAAGGTCCTGTGCCACGAGGCACACAGTTTCAAAG 2328
|||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||
Sbjct 2022 CATGAACTTCTCCCATAACCGTCTCCAAGGTCCAGTGCCACGAGGCACACAGTTTCAAAG 2081
Query 2329 GCAAAAATGTTCTTCATTCTTGGACAACCCTAAACTCTACGGTCTCGAAGAAATCTGTGG 2388
||| | |||||||||||| |||||||||| || |||||||||||||||||| |||||| |
Sbjct 2082 GCAGAGATGTTCTTCATTTTTGGACAACCATAGACTCTACGGTCTCGAAGATATCTGT-G 2140
Query 2389 A-GAAACTCATG-CCTTGAATCCTACATCGCAACTACCCGAGGAATTGTCAGAGGCTGAG 2446
| || ||||||| || |||||||||||| |||| | ||||||| |||| ||| | |||
Sbjct 2141 AGGAGACTCATGTCC-CGAATCCTACATCACAACCATCCGAGGATTTGTTAGACGAGGAG 2199
Query 2447 GAGAAAATGTTCAACTGGGTAGCAGCTGCAATAGCTTATGGACCTGGTGTGTTATGTGGA 2506
|| |||||||||||||||||||||||||||||||| |||||||||||||| || |||||
Sbjct 2200 GAAAAAATGTTCAACTGGGTAGCAGCTGCAATAGCATATGGACCTGGTGTATTTTGTGG- 2258
Query 2507 T-TGGTGATCGGACATATCTTCACTTCACACAATCATGAGTGGTTCACAGAAATGTTTG 2564
| ||||||||||| | ||||||||||||||| ||||||||||||| || |||| |||||
Sbjct 2259 TCTGGTGATCGGATACATCTTCACTTCACACCATCATGAGTGGTTTACGGAAAAGTTTG 2317
Score = 444 bits (240), Expect = 2e-123
Identities = 507/629 (81%), Gaps = 46/629 (7%)
Strand=Plus/Plus
Query 83 CGAAGCCATTGTCATTGGGTTT-CTGACATTATTATCATCTTTTTCTTCC-TCCTTGTAC 140
|||||||||||| ||||| ||| || ||||||| ||| | |||| ||| ||||| |||
Sbjct 7 CGAAGCCATTGTTATTGGTTTTATTG-TATTATTACCATATATTTC-TCCTTCCTTATAC 64
Query 141 ACTCTCTAGCTTCTTCTTCGCCCCACTTTTGCCGTCATGACCAGAGAGATGCTCTTTTGG 200
|||||||||||||| |||||| ||||||||||| || |||||||| |||| |||||||
Sbjct 65 ACTCTCTAGCTTCTCCTTCGCTTCACTTTTGCCGCCACGACCAGAGGGATGGTCTTTTGA 124
Query 201 AATTCAGAGGCGAGTTTCCGATAGATGCCTCTTTGAAAATTATGAATACATGGAGAGGTC 260
||||||||| ||||||||| || |||||| | | | | | || | | |||
Sbjct 125 AATTCAGAGACGAGTTTCC----GA----TCTTTG---AGTCT--A-A-AT-CA-A-GTC 166
Query 261 CGTGGAATAAGAGCACTGATTGTTGTTTTTGGAACGGAGTCACATGCGATGATAAATCTG 320
|||||||||||| ||| ||||| |||| |||| |||| ||||| ||||||||||||||||
Sbjct 167 CGTGGAATAAGACCACCGATTGCTGTTCTTGGGACGGTGTCACGTGCGATGATAAATCTG 226
Query 321 GTCAGGTAATATCACTCGACCTTCCTAACACCTTTCTCCACGGCTATTTGAAAACCAACA 380
| |||||||||||||||||||||| || |||| ||||| || ||| ||||||||||||||
Sbjct 227 GCCAGGTAATATCACTCGACCTTCGTAGCACCCTTCTCAACAGCTCTTTGAAAACCAACA 286
Query 381 GTAGCCTTTTTAAACTCCAATATCTTCGTCACCTAAACCTTAGTAATTGCAATCTCAAAG 440
|||| ||||||| |||||||||||||||||||||| ||||| | |||||||||| | |
Sbjct 287 GTAGTCTTTTTAGACTCCAATATCTTCGTCACCTAGACCTTTCTGGTTGCAATCTCCATG 346
Query 441 GAGAGATTCCTTCTTCACTAGGAAACCTTTCTCATCTC-ACACTTGTTAACCTTTTCTT- 498
||||||||||||||||||||||||||||||| | |||| | | | || | |||| |||
Sbjct 347 GAGAGATTCCTTCTTCACTAGGAAACCTTTCCCGTCTCGAAAATC-TTGAGCTTT-CTTC 404
Query 499 TAATCA-ATTGGTAGGAGAAATTCCGGCTTCAATCGGCAATCTAAACCAGCTAAGATACC 557
|||| | |||||| || || |||||| |||||| || || ||||| || |||||| |||
Sbjct 405 TAAT-AGATTGGTCGGTGAGATTCCGTATTCAATAGGGAACCTAAAGCAACTAAGAAACC 463
Query 558 TTAACCTTCAGTCTAACGATCTCACAGGAGAGATTCCTTCTTCACTAGGAAACCTTTCTC 617
||| |||| | ||||||||||| |||||| ||||||||||| ||||||||||||||||
Sbjct 464 TTAGCCTTGGGGATAACGATCTCATAGGAGAAATTCCTTCTTCCCTAGGAAACCTTTCTC 523
Query 618 GTCTC--ACAT-TTGTTAGCCTAGCTG-A-TAATATCTT-GGTAGGT-AAGATTCCAGAT 670
|||| | || ||| | ||| || | |||| |||| ||||||| ||| |||||| |
Sbjct 524 TTCTCTTAGATCTTG--A-CCTT--TGGAATAAT-TCTTTGGTAGGTGAAG-TTCCAGCT 576
Query 671 TC-ATTAGGAAATCTAAA-GCATCTAAGA 697
|| || ||||| ||||| | | ||||||
Sbjct 577 TCCATC-GGAAACCTAAACGAA-CTAAGA 603
Score = 63.9 bits (34), Expect = 8e-09
Identities = 39/41 (95%), Gaps = 2/41 (5%)
Strand=Plus/Plus
Query 720 ATCTCACA-GGAGAGATTCCTTCTTCACTAGGAAACCTTTC 759
||||| || ||||||||||||||||||||||||||||||||
Sbjct 338 ATCTC-CATGGAGAGATTCCTTCTTCACTAGGAAACCTTTC 377
> AT3G05360.1 | Symbols: AtRLP30, RLP30 | receptor like protein
30 | chr3:1530735-1533288 REVERSE LENGTH=2554
Length=2554
Score = 65.8 bits (35), Expect = 2e-09
Identities = 39/41 (95%), Gaps = 0/41 (0%)
Strand=Plus/Plus
Query 584 GGAGAGATTCCTTCTTCACTAGGAAACCTTTCTCGTCTCAC 624
|||||| || |||||||||||||||||||||||||||||||
Sbjct 401 GGAGAGGTTACTTCTTCACTAGGAAACCTTTCTCGTCTCAC 441
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 131387223717
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5