BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg497341
Length=1071
Score E
Sequences producing significant alignments: (Bits) Value
AT5G55890.1 | Symbols: | Protein of unknown function (DUF295) ... 1053 0.0
AT5G55880.1 | Symbols: | Protein of unknown function (DUF295) ... 1053 0.0
AT5G55270.1 | Symbols: | Protein of unknown function (DUF295) ... 665 0.0
AT5G54550.1 | Symbols: | Protein of unknown function (DUF295) ... 403 2e-111
AT5G54320.1 | Symbols: | Protein of unknown function (DUF295) ... 398 7e-110
AT5G55870.1 | Symbols: | unknown protein; BEST Arabidopsis tha... 241 1e-62
AT1G11482.1 | Symbols: | unknown pseudogene | chr1:3867405-386... 230 3e-59
AT5G53240.1 | Symbols: | Protein of unknown function (DUF295) ... 148 8e-35
> AT5G55890.1 | Symbols: | Protein of unknown function (DUF295)
| chr5:22622737-22623837 REVERSE LENGTH=1101
Length=1101
Score = 1053 bits (570), Expect = 0.0
Identities = 632/662 (95%), Gaps = 4/662 (1%)
Strand=Plus/Plus
Query 412 GATGAGAACTGTGTTGTGGCTGTCAAGTTCTTGGGACCTCAAATCAGCTTTTGCAGACCC 471
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 442 GATGAAAACTGTGTTGTGGCTGTCAAGTTCTTGGGACCTCAAATCAGCTTTTGCAGACCG 501
Query 472 GCTCAACGTAACTCTGAGTGGATCAATGTCAGAATCGCAAACCCTTGTTTCTACTCCTCT 531
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 502 GCTCAACGTAACTCTGAGTGGATCAATGTCAGAATCGCAAACCCTTGTTTCTACTCCTCT 561
Query 532 CGTGTCATGTTTTCGGAGAAACATGACATGTTTTGCATCCCCGGATCTGGAGGCCATCTC 591
||||||||||||||||||||||||||| ||||| |||| |||||||| ||||||||| ||
Sbjct 562 CGTGTCATGTTTTCGGAGAAACATGACTTGTTTCGCATTCCCGGATCAGGAGGCCATATC 621
Query 592 ATTGCATCATGGGACCTCCACACAGACAAGCACAAAAATCCCAAGTTTCAGAGGTTGAGG 651
||||| |||||||| ||||||| |||||||||||||||||||||||||||||||||| ||
Sbjct 622 ATTGCTTCATGGGATCTCCACAAAGACAAGCACAAAAATCCCAAGTTTCAGAGGTTGCGG 681
Query 652 TTCCAAAACATTCCAAAGCTGACAAAGACCAAACGAGAGATTATGGATTCGTGCTACAAA 711
||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 682 TTCCAAAACCTTCCAAAGCTGACAAAGACCAAACGAGAGGTTATGGATTCGTGCTACAAA 741
Query 712 AGCGAACACTTGGTGGAGTCAAGAACCACCGGTGAAACTTTCTTGGTTAAGTGGTACAGG 771
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 742 AGCGAACACTTGGTGGAGTCAAGAACCACCGGTGAAACTTTCTTGGTTAAGTGGTACAGG 801
Query 772 AAGGCCGTCTGGAGAGGTATGTCGAAATTGAGCACAAAAGCTTTAATGGTGTTCAGGCTG 831
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 802 AAGGCCGTCTGGAGAGGTATGTCGAAATTGAGCACAAAAGCTTTAATGGTGTTTAGGCTA 861
Query 832 GACGACGAAGGAAATGCTGTGTACACTAAAGACATTGGAGATCTCTGCATTTTCCTCTCA 891
|||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct 862 GACGACGAAGGAAATGCTGTTTACACTAAAGACATTGGAGATCTATGCATTTTCCTCTCA 921
Query 892 AAATCTGAACCTTTTTGTGTCTCTCTTAGCTCCTTACCAGGCATGTTTTTCCCTAACAAT 951
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 922 AAATCTGAACCTTTTTGTGTCTCTCTTAGCTCCTTACCACGCATGTTTTTCCCTAACAAT 981
Query 952 GTTGAATACATGGATGCGGACGAAGCCGGATATTATGA-TCTGGC-AGATTCTTCTATCG 1009
||||||||||||||||| ||||||| |||||||| | | ||| || |||| || | ||||
Sbjct 982 GTTGAATACATGGATGCTGACGAAGACGGATATT-TCAATCTAGCCAGATCCTCC-ATCG 1039
Query 1010 TTGGTGATCTTACTCTAATGGGGACCGGTGTCTATATTCCACCTCAAAATATAGACAACT 1069
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1040 TTGGTGATCTTACTAGAATGGGGACCGGTGTCTATATTCCACCTCAAAATATAGACAACT 1099
Query 1070 AG 1071
||
Sbjct 1100 AG 1101
Score = 638 bits (345), Expect = 0.0
Identities = 386/405 (95%), Gaps = 6/405 (1%)
Strand=Plus/Plus
Query 1 ATGTCTCTGCTTCTCAACCAGCCCTCGAAGCTACTATGCTTCCGGAGGAAATCTGTGT-T 59
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct 1 ATGTCTCTGCTTCTCAACCAGCCCTCGAAGCTACTATGCTTCCGGAGGAAATCTGT-TCT 59
Query 60 GGTAAGATCCTCTCCTCTTCTCTCTAATGGCTTATCATCTTCATTGCGGCAAACTCCGCC 119
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 60 GGTAAGATCCTCTCCTCTTCTCTCTAATGGTTTATCATCTTCATTGCGGCAAACTCCGCC 119
Query 120 TTGTACCATCATCGACGCTGTTCCATGTGGAGCGGATCTCGGAAAACTCGTCATTTCCAA 179
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct 120 TTGTACCATCATCGACGCTGTTCCATGTGGAGAGGATCTCGGAAAACTCGTCATTTACAA 179
Query 180 TGCTAACGCAGTTCGCTACACTTACTTGGAAAAGAAGGTGCCTCTGGAGTTGGTGGATAA 239
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct 180 TGCTAACGCAGTTCACTTCACTTACTTGGAAAAGAAGGTGCCTCTGGAGTTGGTGGATAA 239
Query 240 TCCAATGTTAACGATCGGGTCATCCCATGGCTGGATAGCTACTTTGAGTCAGGACGACGG 299
||||||| ||||||||||||| |||||||| ||| |||||||||||||||||||||||||
Sbjct 240 TCCAATGGTAACGATCGGGTCGTCCCATGGTTGGGTAGCTACTTTGAGTCAGGACGACGG 299
Query 300 AATACTTCGTCTCCAAGACGATCTAAACCCGGTTGCATCGGATATAGAACCG-AAACGCA 358
|||||||||||||||||| ||||||||||||| ||||||||||| | |||| |||||||
Sbjct 300 AATACTTCGTCTCCAAGATGATCTAAACCCGGCTGCATCGGATACA-AACCCTAAACGCA 358
Query 359 TTCCACT-GCCTCCTCTTGTAACTCTGCCTCATTGCCAAACTCAA 402
|||| || |||||||||||||||||||||||||||||||||||||
Sbjct 359 TTCC-CTTGCCTCCTCTTGTAACTCTGCCTCATTGCCAAACTCAA 402
> AT5G55880.1 | Symbols: | Protein of unknown function (DUF295)
| chr5:22619104-22620204 REVERSE LENGTH=1101
Length=1101
Score = 1053 bits (570), Expect = 0.0
Identities = 632/662 (95%), Gaps = 4/662 (1%)
Strand=Plus/Plus
Query 412 GATGAGAACTGTGTTGTGGCTGTCAAGTTCTTGGGACCTCAAATCAGCTTTTGCAGACCC 471
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 442 GATGAAAACTGTGTTGTGGCTGTCAAGTTCTTGGGACCTCAAATCAGCTTTTGCAGACCG 501
Query 472 GCTCAACGTAACTCTGAGTGGATCAATGTCAGAATCGCAAACCCTTGTTTCTACTCCTCT 531
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 502 GCTCAACGTAACTCTGAGTGGATCAATGTCAGAATCGCAAACCCTTGTTTCTACTCCTCT 561
Query 532 CGTGTCATGTTTTCGGAGAAACATGACATGTTTTGCATCCCCGGATCTGGAGGCCATCTC 591
||||||||||||||||||||||||||| ||||| |||| |||||||| ||||||||| ||
Sbjct 562 CGTGTCATGTTTTCGGAGAAACATGACTTGTTTCGCATTCCCGGATCAGGAGGCCATATC 621
Query 592 ATTGCATCATGGGACCTCCACACAGACAAGCACAAAAATCCCAAGTTTCAGAGGTTGAGG 651
||||| |||||||| ||||||| |||||||||||||||||||||||||||||||||| ||
Sbjct 622 ATTGCTTCATGGGATCTCCACAAAGACAAGCACAAAAATCCCAAGTTTCAGAGGTTGCGG 681
Query 652 TTCCAAAACATTCCAAAGCTGACAAAGACCAAACGAGAGATTATGGATTCGTGCTACAAA 711
||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 682 TTCCAAAACCTTCCAAAGCTGACAAAGACCAAACGAGAGGTTATGGATTCGTGCTACAAA 741
Query 712 AGCGAACACTTGGTGGAGTCAAGAACCACCGGTGAAACTTTCTTGGTTAAGTGGTACAGG 771
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 742 AGCGAACACTTGGTGGAGTCAAGAACCACCGGTGAAACTTTCTTGGTTAAGTGGTACAGG 801
Query 772 AAGGCCGTCTGGAGAGGTATGTCGAAATTGAGCACAAAAGCTTTAATGGTGTTCAGGCTG 831
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 802 AAGGCCGTCTGGAGAGGTATGTCGAAATTGAGCACAAAAGCTTTAATGGTGTTTAGGCTA 861
Query 832 GACGACGAAGGAAATGCTGTGTACACTAAAGACATTGGAGATCTCTGCATTTTCCTCTCA 891
|||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct 862 GACGACGAAGGAAATGCTGTTTACACTAAAGACATTGGAGATCTATGCATTTTCCTCTCA 921
Query 892 AAATCTGAACCTTTTTGTGTCTCTCTTAGCTCCTTACCAGGCATGTTTTTCCCTAACAAT 951
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 922 AAATCTGAACCTTTTTGTGTCTCTCTTAGCTCCTTACCACGCATGTTTTTCCCTAACAAT 981
Query 952 GTTGAATACATGGATGCGGACGAAGCCGGATATTATGA-TCTGGC-AGATTCTTCTATCG 1009
||||||||||||||||| ||||||| |||||||| | | ||| || |||| || | ||||
Sbjct 982 GTTGAATACATGGATGCTGACGAAGACGGATATT-TCAATCTAGCCAGATCCTCC-ATCG 1039
Query 1010 TTGGTGATCTTACTCTAATGGGGACCGGTGTCTATATTCCACCTCAAAATATAGACAACT 1069
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1040 TTGGTGATCTTACTAGAATGGGGACCGGTGTCTATATTCCACCTCAAAATATAGACAACT 1099
Query 1070 AG 1071
||
Sbjct 1100 AG 1101
Score = 638 bits (345), Expect = 0.0
Identities = 386/405 (95%), Gaps = 6/405 (1%)
Strand=Plus/Plus
Query 1 ATGTCTCTGCTTCTCAACCAGCCCTCGAAGCTACTATGCTTCCGGAGGAAATCTGTGT-T 59
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct 1 ATGTCTCTGCTTCTCAACCAGCCCTCGAAGCTACTATGCTTCCGGAGGAAATCTGT-TCT 59
Query 60 GGTAAGATCCTCTCCTCTTCTCTCTAATGGCTTATCATCTTCATTGCGGCAAACTCCGCC 119
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 60 GGTAAGATCCTCTCCTCTTCTCTCTAATGGTTTATCATCTTCATTGCGGCAAACTCCGCC 119
Query 120 TTGTACCATCATCGACGCTGTTCCATGTGGAGCGGATCTCGGAAAACTCGTCATTTCCAA 179
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct 120 TTGTACCATCATCGACGCTGTTCCATGTGGAGAGGATCTCGGAAAACTCGTCATTTACAA 179
Query 180 TGCTAACGCAGTTCGCTACACTTACTTGGAAAAGAAGGTGCCTCTGGAGTTGGTGGATAA 239
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct 180 TGCTAACGCAGTTCACTTCACTTACTTGGAAAAGAAGGTGCCTCTGGAGTTGGTGGATAA 239
Query 240 TCCAATGTTAACGATCGGGTCATCCCATGGCTGGATAGCTACTTTGAGTCAGGACGACGG 299
||||||| ||||||||||||| |||||||| ||| |||||||||||||||||||||||||
Sbjct 240 TCCAATGGTAACGATCGGGTCGTCCCATGGTTGGGTAGCTACTTTGAGTCAGGACGACGG 299
Query 300 AATACTTCGTCTCCAAGACGATCTAAACCCGGTTGCATCGGATATAGAACCG-AAACGCA 358
|||||||||||||||||| ||||||||||||| ||||||||||| | |||| |||||||
Sbjct 300 AATACTTCGTCTCCAAGATGATCTAAACCCGGCTGCATCGGATACA-AACCCTAAACGCA 358
Query 359 TTCCACT-GCCTCCTCTTGTAACTCTGCCTCATTGCCAAACTCAA 402
|||| || |||||||||||||||||||||||||||||||||||||
Sbjct 359 TTCC-CTTGCCTCCTCTTGTAACTCTGCCTCATTGCCAAACTCAA 402
> AT5G55270.1 | Symbols: | Protein of unknown function (DUF295)
| chr5:22419157-22420410 FORWARD LENGTH=1254
Length=1254
Score = 665 bits (360), Expect = 0.0
Identities = 568/665 (85%), Gaps = 28/665 (4%)
Strand=Plus/Plus
Query 412 GATGA-GAACTGTGTTGTGGCTGTCAAGTTCTTGGGACCTCAAATCAGCTTTTGCAGACC 470
||||| ||| ||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 497 GATGAGGAA-TGTGTTGTGGCTGTCAAGTTCTTGGGACCTCAACTCAGCTTTTGCAGACC 555
Query 471 CGCTCAACGTAACTCTGAGTGGATCAATGTCAGAATCGCAAACCCTTGTTTCTACTCCTC 530
|||||| ||||||| |||||||||| ||||||||||||||||||| |||||||||||
Sbjct 556 TGCTCAAAGTAACTCCAAGTGGATCAACATCAGAATCGCAAACCCTTGCTTCTACTCCTC 615
Query 531 TCGTGTCATGTTTTCGGAGAAACATGACATGTTTTGCATCCCCGGATCTGGAGGCCATCT 590
|||||||||||||||| ||||| |||| |||||| |||| | |||||||||||||||| |
Sbjct 616 TCGTGTCATGTTTTCGAAGAAAGATGAGATGTTTCGCATACTCGGATCTGGAGGCCATAT 675
Query 591 CATTGCATCATGGGACCTCCACACAGACAAGCACAAAAATCCCAAGTTTCAGAGGTTGAG 650
||||| ||||||||| ||||||||| |||| |||||| || |||||| || ||| |
Sbjct 676 CATTGGATCATGGGATCTCCACACACACAA--TCAAAAA--CC--GTTTCAAAGATTGCG 729
Query 651 GTTCCAAAACATTCCAAAGCTGACAAAGACCAAACGAGAGATTATGGATTCGTGCTACAA 710
|||| ||||| |||| ||||||||||||||||||| |||| | |||||||||||||||||
Sbjct 730 GTTCAAAAACCTTCCCAAGCTGACAAAGACCAAACAAGAGCTGATGGATTCGTGCTACAA 789
Query 711 AAGCGAACACTTGGTGGAGTCAAGAACCACCGGTGAAAC-TTTCTTGGTTAAGTGGTACA 769
||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| |
Sbjct 790 AAGCGAACACTTGGTGGAGTCAAGAACCACCGGTGAAACATTT-TTGGTTAAGTGGTATA 848
Query 770 GGAAGGCCGTCTGGAGAGGTATGTCGAAATTGAGCACAAAAGCTTTAATGGTGTTCAGGC 829
||||||||||||||||||||||||||||| ||| ||||||||||||||||| |||| ||
Sbjct 849 GGAAGGCCGTCTGGAGAGGTATGTCGAAACTGAAAACAAAAGCTTTAATGGTATTCAAGC 908
Query 830 TGGACGACGAAGGAAATGCTGTGTACACTAAAGACATTGGAGATCTCTGCATTTTCCTCT 889
| |||||| ||||||| ||||| |||||| |||| |||||||||||||||||||||||||
Sbjct 909 TAGACGACAAAGGAAACGCTGTTTACACTCAAGATATTGGAGATCTCTGCATTTTCCTCT 968
Query 890 CAAAATCTGAACCTTTTTGTGT-CTCTCTTAGCTCCTTACCAGGCATGTTTTTCCCTAAC 948
|||| |||||||| |||||||| | || |||||||||| || || ||| | |||||||||
Sbjct 969 CAAAGTCTGAACCATTTTGTGTAC-CTGTTAGCTCCTTTCCTGGTATGATGTTCCCTAAC 1027
Query 949 AATGTTGAA--TACATGGATG-CGGACGAAGCCGGATATTATGA-TCTGGCAGATTCTTC 1004
| || || | | ||||| ||| ||| |||||| | | |||||| ||||||||
Sbjct 1028 CACGTC-AACCT-CGCGGATGTCGGT-GAAAAGGGATATG-TCAATCTGGCTGATTCTTC 1083
Query 1005 TATCGT-TGGT-GATCTTACTCTAATGGGGACC-GGTGT-CTATATTCCACCTCAAAATA 1060
||| | || | | | |||| ||| ||| || ||| | | ||||||||||||||| ||
Sbjct 1084 CATC-TCTGCTCG-TAATACTAGAATCGGG-CCAGGT-TACCATATTCCACCTCAAATTA 1139
Query 1061 TAGAC 1065
|||||
Sbjct 1140 TAGAC 1144
> AT5G54550.1 | Symbols: | Protein of unknown function (DUF295)
| chr5:22158401-22159560 FORWARD LENGTH=1160
Length=1160
Score = 403 bits (218), Expect = 2e-111
Identities = 412/506 (81%), Gaps = 12/506 (2%)
Strand=Plus/Plus
Query 412 GATGAGAACTGTGTTGTGGCTGTCAAGTTCTTGGGACCTCAAATCAGCTTTTGCAGACCC 471
|||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||||
Sbjct 439 GATGAGGACTGTGTTGTGGCTGTCAAGTTCTTGGGGCCTCAACTCAGCTTTTGCAGACCG 498
Query 472 GCTCAACGTAACTCTGAGTGGATCAATGTCA-GAATCGCAAACCCTTGTTTCTACTCCTC 530
||| || | ||||| ||||||| ||| ||| || ||||||||||| | |||| ||||||
Sbjct 499 GCTAAAAGCAACTCCGAGTGGACCAACATCAAGA-TCGCAAACCCTAGCTTCTTCTCCTC 557
Query 531 TCGTGTCATGTTTTCGGAGAAACATGACATGTTTTGCATCCCCGGATCTGGAGGCCATCT 590
|||||||||||||| ||||| |||| |||||| | || || || ||||||||||| ||
Sbjct 558 ACGTGTCATGTTTTCTAAGAAAGATGAGATGTTTCGTATTCCTGGGTCTGGAGGCCACCT 617
Query 591 CATTGCATCATGGGACCTCCACACAGACAAGCACAAAAATCCCAAGTTTCAGAGGTTGAG 650
||| | ||||||||| |||| |||||| | ||||| ||||||| |||||||| || |
Sbjct 618 CATCGGATCATGGGATCTCCGCACAGAGGATCACAA---TCCCAAGATTCAGAGGCTGCG 674
Query 651 GTTCCAAAACATTCCAAAGCTGACAAAGACCAAACGAGAGATTATGGATTCGTGCTACAA 710
|||| |||| |||| ||||| | | | |||| || ||| || | |||||||||||||
Sbjct 675 ATTCCGAAACCTTCCCGAGCTGCCTAGGGCCAAGCGGGAGCTTCTAGATTCGTGCTACAG 734
Query 711 AAGCGAACACTTGGTGGAGTCAAGAA-CCACCGGTGAAACTTT-CTTGGTTAAGTGGTAC 768
|| ||||| ||||||||||| || |||| |||||| |||| |||||| ||| |||||
Sbjct 735 GAGTGAACATTTGGTGGAGTCTC-AATCCACTGGTGAA-CTTTTCTTGGTAAAGCGGTAC 792
Query 769 AGGAAGGCCGTCTGGAGAGGTATG-TCGAAATTGAGCACAAAAGCTTTAATGGTGTTCAG 827
| ||||||| | |||| || | | |||| || ||| ||| | ||||||||||||
Sbjct 793 AAGAAGGCCACCACCAGAGATACGGTAAAAAT-GAAAACACAAGGTGTAATGGTGTTCAA 851
Query 828 GCTGGACGACGAAGGAAATGCTGTGTACACTAAAGACATTGGAGATCTCTGCATTTTCCT 887
||| ||||| ||||||| |||||||||||| |||||||||||||||| |||||||| ||
Sbjct 852 GCTAGACGAAAAAGGAAACGCTGTGTACACTCAAGACATTGGAGATCTTTGCATTTTTCT 911
Query 888 CTCAAAATCTGAACCTTTTTGTGTCT 913
|||||| ||||||||||||||| |||
Sbjct 912 CTCAAAGTCTGAACCTTTTTGT-TCT 936
> AT5G54320.1 | Symbols: | Protein of unknown function (DUF295)
| chr5:22062805-22063914 FORWARD LENGTH=1110
Length=1110
Score = 398 bits (215), Expect = 7e-110
Identities = 456/564 (81%), Gaps = 50/564 (9%)
Strand=Plus/Plus
Query 412 GATG-AGAACTGTGTTGTGGCTGTCAAGTTCTTGGGACCTCAAATCAGCTTTTGCAGACC 470
|||| || |||||||||||||||||||||| ||||||||||| ||||||||||||||||
Sbjct 454 GATGAAG-ACTGTGTTGTGGCTGTCAAGTTTTTGGGACCTCAGCTCAGCTTTTGCAGACC 512
Query 471 CGCTCAACGTAACTCTGAGTGGATCAATGTCAGAATCGCAAACCCTTGTTTCTACTCCTC 530
|||||| ||||||| ||||||||||| ||||||||| ||||||||||||||||| ||
Sbjct 513 GGCTCAAAGTAACTCCGAGTGGATCAACATCAGAATCGAAAACCCTTGTTTCTACTTATC 572
Query 531 TCGTGTCATGTTTTCGGAGAAACATGACATGTTTTGCATCCCCGGATCTGGAGGCCATCT 590
||||||||||| || ||||| || ||||||||||||| |||||||||||||| || ||
Sbjct 573 TCGTGTCATGTACTCCAAGAAAGATAACATGTTTTGCATTCCCGGATCTGGAGGACACCT 632
Query 591 CATTGCATCATGGGACCTCCACACAGACAAGCACAAAAATCCCAAGTTT-CAGAGGTTG- 648
||||| | ||||||| |||| |||| ||||| | || || ||| ||||| |||
Sbjct 633 CATTGGAACATGGGATCTCCGCACACACAAG--C----AT---AA-TTTGCAGAGCTTGC 682
Query 649 AGGTTCCAAAACATTCCAAAGCTGACAAAGACCAAACGAGA-GATTA-TGGATTCGTGCT 706
| ||| |||||| |||| ||||||||||||||||||| ||| | | | ||||||| || |
Sbjct 683 A-GTTTCAAAACCTTCCCAAGCTGACAAAGACCAAAC-AGAAGCT-ACTGGATTCATGTT 739
Query 707 ACAAAAGCGAACACTTGGTGGAGTCAAGAACCACC-GGTGAAACTTTCTTGGTTAAGTGG 765
||| ||||| |||||||| |||||| ||| | ||||||||||||||||||||||||
Sbjct 740 GCAAGAGCGAGCACTTGGTTGAGTCA----CCAGCTGGTGAAACTTTCTTGGTTAAGTGG 795
Query 766 TACAGGAAGGC--C--G-----TC-TGGAGAGGTAT-GTCG-AAATTGAGCACAAAAGCT 813
|||| |||| | | | || | || ||||| | || |||| || ||| |||||
Sbjct 796 TACAAGAAGTCTTCAAGCAAGATCATCAAG-GGTATTG-CGCAAAT-GAAAACACAAGCT 852
Query 814 TTAATGGTGTTCAGGCTGGACGA-CGAAGGAAATGCTGTGTACACTAAAGACATTGGAGA 872
||||||||||||| ||| ||||| | ||||||| || || |||||| |||| ||||||||
Sbjct 853 TTAATGGTGTTCAAGCTTGACGAAC-AAGGAAACGCGGTTTACACTCAAGATATTGGAGA 911
Query 873 TCTCTGCATTTTCCTCTCAAAATCTGAACCTTTTTGTGTCTCT--CTTAGCTCCTTACCA 930
|||||||||||| || ||||| |||||||||||||||||| || || ||||| || ||
Sbjct 912 TCTCTGCATTTTTCTTTCAAAGTCTGAACCTTTTTGTGTC-CTTGCT-AGCTCTTTTCCC 969
Query 931 GG-CATGTTTTTCCCTAACAATGT 953
|| | ||| ||||||||||||
Sbjct 970 GGAC-TGTG---CCCTAACAATGT 989
Score = 366 bits (198), Expect = 2e-100
Identities = 346/414 (84%), Gaps = 24/414 (6%)
Strand=Plus/Plus
Query 7 CTGCTTCTCAACCAGCCCTCGAAGCTACTATGCTTCCGGAGGAAATCTGTGTTGGTAAGA 66
|||||||||||||| |||| ||||||||||||||| ||||||||| |||||||||| |||
Sbjct 7 CTGCTTCTCAACCAACCCTTGAAGCTACTATGCTTTCGGAGGAAACCTGTGTTGGTGAGA 66
Query 67 TCCTCTCCTCTTCTCTCT-A--ATGGCTTATCATCTTCATTGCGGCAAACTCCGCCTTGT 123
|| ||||||||||||||| | |||||||||||||||| |||| ||||||||| ||||||
Sbjct 67 TCATCTCCTCTTCTCTCTAATGATGGCTTATCATCTTCTTTGCTGCAAACTCCTCCTTGT 126
Query 124 ACCATCATCGA-CGCTGTTCCATGTGG-AG-C--G-G-ATCTCGGAAAACTCGTCATTTC 176
| || || | |||| | ||||| || | | | | ||||||||||| ||||
Sbjct 127 TTCGTCGTC-AGCGCTAAACGTTGTGGAAGACTTGCGAAAGAGGGAAAACTCGTGATTTT 185
Query 177 CAATGCTAACGCAGTTCG-CTACACTTAC-TTGGAAAAGAAGGTGCCTCTGGAGTTG--G 232
||| || | | || | | | ||||| | ||||| |||||||||||| ||| |||| |
Sbjct 186 GAATCCTTATGAAGAT-GAATGCACTT-CTTTGGATAAGAAGGTGCCTATGGCGTTGTTG 243
Query 233 T-GGATAATCCAA--TGTTAACGATCGGGTCATCCCATGGCTGGATAGCTACTTTGAGTC 289
| |||||| || || |||| ||||| |||||||||||||||||||||||||||||||
Sbjct 244 TATGATAAT-GAACTTG-TAACCATCGGTTCATCCCATGGCTGGATAGCTACTTTGAGTC 301
Query 290 AGGACGACGGAATACTTCGTCTCCAAGACGATCTAAACCCGGTTGCATCGGATA-TAGAA 348
||||||||||| |||| ||||||||||||||||||||||||||||||||||||| || |
Sbjct 302 AGGACGACGGACTACTGCGTCTCCAAGACGATCTAAACCCGGTTGCATCGGATACTA-AC 360
Query 349 CCGAAACGCATTCCACTGCCTCCTCTTGTAACTCTGCCTCATTGCCAAACTCAA 402
|||||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct 361 CCGAAACGCATTCCCCTGCCTCCTCTTGTAACTCTCCCTCATTGCCAAACTCAA 414
> AT5G55870.1 | Symbols: | unknown protein; BEST Arabidopsis thaliana
protein match is: Protein of unknown function (DUF295)
(TAIR:AT5G54330.1); Has 1807 Blast hits to 1807 proteins
in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink). | chr5:22612637-22613311 REVERSE LENGTH=675
Length=675
Score = 241 bits (130), Expect = 1e-62
Identities = 185/210 (88%), Gaps = 10/210 (5%)
Strand=Plus/Plus
Query 198 CACTTACTTGGAAAAGAAGGTGCCTCTGGAGTTGGTGGATA---ATCCAATGTTAACGAT 254
||||| ||||||||||||||| ||||| |||||||| ||| |||||||| |||||||
Sbjct 165 CACTTGCTTGGAAAAGAAGGTACCTCTAGAGTTGGTAAATAGTGATCCAATGGTAACGAT 224
Query 255 CGGGTCATCCCATGGCTGGATAGCTACTTTGAGTCAGGACGACGGAATACTT-CGTCTCC 313
||||||||||||||| ||| |||||||||||| |||| || || ||| || |||||||
Sbjct 225 CGGGTCATCCCATGGTTGGGTAGCTACTTTGA---AGGAGGATGGTATA-TTGCGTCTCC 280
Query 314 AAGACGATCTAAACCCGGTTGCATCGGATATAGAACCG-AAACGCATTCCACTGCCTCCT 372
|||||||||||||||||||||||||||||| | |||| ||||||||||| |||||||||
Sbjct 281 AAGACGATCTAAACCCGGTTGCATCGGATACA-AACCCTAAACGCATTCCCCTGCCTCCT 339
Query 373 CTTGTAACTCTGCCTCATTGCCAAACTCAA 402
|||||||||||||||||||||||||| |||
Sbjct 340 CTTGTAACTCTGCCTCATTGCCAAACCCAA 369
> AT1G11482.1 | Symbols: | unknown pseudogene | chr1:3867405-3868870
REVERSE LENGTH=1123
Length=1123
Score = 230 bits (124), Expect = 3e-59
Identities = 385/506 (76%), Gaps = 38/506 (8%)
Strand=Plus/Plus
Query 419 ACTGTGTTGTGGCTGTCAAGTTCTTGGGACCTCAAATCAGCTTTTGCAGACCCGCTCAAC 478
|||||||||||||| | ||| |||| ||||| ||| ||||||| || |||||||||||
Sbjct 440 ACTGTGTTGTGGCTAT-AAG-TCTTAGGACCACAACTCAGCTTATGTTGACCCGCTCAAA 497
Query 479 GTAACTCTGAGTGGATCAATGTCAGA-ATCGCA-AACCCTTGTTTCTACTCCTCTCGTGT 536
||||| ||||||||||||| || || || || ||| | | |||| ||| || | |||
Sbjct 498 GTAACCCTGAGTGGATCAACATC-GAGAT-TCAGAACTCAAGCTTCTTCTCTTCCCCTGT 555
Query 537 CATGTTTTCGGAGAAACATGACATGTTTTGCATCCCCGGATCTGGAGGCCATC-TCATTG 595
||||||||| ||| | ||| ||||| ||||| || |||||||| || | | | ||
Sbjct 556 CATGTTTTCCAAGAGAGTTGAGATGTTCTGCATACCTTCTTCTGGAGGTCA-CGTTACTG 614
Query 596 CATCATGGGACCTCCACACAGACAAGCACAAAAATCCCAAGTTTCAGAGGTTGAGGTTCC 655
||| ||||| | | | | |||| || | |||||| |||||| || | || |
Sbjct 615 GATCGTGGGA--T-CTC-C--ACAA--AC----A---CAAGTTGCAGAGGGTGCGATTTC 659
Query 656 AAAACATTCCAAAGCTGACAAAG-ACCAAACGAGAGATTATGGATTCGTGCTA-CAAAAG 713
|||| || | ||| |||||||| | || || || || |||||||||| || || ||
Sbjct 660 GAAACCTTGCTAAGTTGACAAAGAAGGAATGGA-AGCTTTTGGATTCGTG-TAGCAGGAG 717
Query 714 CGAACACTTGGTGGAGTCAAGAACCACCGGTGAAACTTTCTTGGTTAAGTGGTACAGGAA 773
|||||| ||||||||||| || | | ||||||||||||||||||||||||||||||
Sbjct 718 CGAACATTTGGTGGAGTC-AGCA-GA-AAATGAAACTTTCTTGGTTAAGTGGTACAGGAA 774
Query 774 GGCCGTCTGGAGAGGTATGTCGA-AATTGA-G-C-ACAAAAGCTTTAATGGTGTTCAGGC 829
| | | || | || || || ||| | | ||||| ||| |||||||||||| ||
Sbjct 775 -G--AAAAGCAAAGATTTGAAGAGAA-TGATGACAACAAAGGCTGTAATGGTGTTCAAGC 830
Query 830 TGGACGACGAAGGAAATGCTGTGTACACTAAAGACATTGGAGATCTCTGCATTTTCCTCT 889
| ||| | |||||||||||||| |||||| |||||||||||||||||||||||||||||
Sbjct 831 TTGACAAAGAAGGAAATGCTGTTTACACTCGAGACATTGGAGATCTCTGCATTTTCCTCT 890
Query 890 CAAAATCTGAACCTTTTTGTGTCTCT 915
||||||||||| |||| |||||||||
Sbjct 891 CAAAATCTGAATCTTTCTGTGTCTCT 916
> AT5G53240.1 | Symbols: | Protein of unknown function (DUF295)
| chr5:21601481-21602739 FORWARD LENGTH=1259
Length=1259
Score = 148 bits (80), Expect = 8e-35
Identities = 131/155 (85%), Gaps = 5/155 (3%)
Strand=Plus/Plus
Query 249 AACGATCGGGTCATCCCATGGCTGGATAGCTACTTTGAGTCAGGACGACGGAATACTTCG 308
|||||||||||| || ||||| ||| ||| |||||| | | ||||||||||| || ||
Sbjct 291 AACGATCGGGTCTTCGCATGGTTGGGTAGTTACTTT-A--AAAGACGACGGAATTCTACG 347
Query 309 TCTCCAAGACGATCTAAACCCGGTTGCATCGGATATAGAACCGAAACGCAT-TCCACTGC 367
||||||||||||||||||||||||||| || || | ||| || |||||||| || ||||
Sbjct 348 TCTCCAAGACGATCTAAACCCGGTTGCGTCAGAGACAGATCCCAAACGCATCTCG-CTGC 406
Query 368 CTCCTCTTGTAACTCTGCCTCATTGCCAAACTCAA 402
| |||||||| |||||||||||||||||||| |||
Sbjct 407 CCCCTCTTGTGACTCTGCCTCATTGCCAAACCCAA 441
Score = 113 bits (61), Expect = 3e-24
Identities = 104/124 (84%), Gaps = 6/124 (5%)
Strand=Plus/Plus
Query 1 ATGTCTCTGCTTCTCAACCAGCCCTCGAAGCTACTATGCTTCCGGAGGAAATCTGTGTTG 60
||||||||||||||||||||||||||||||||| | |||| ||||| | ||||||||
Sbjct 67 ATGTCTCTGCTTCTCAACCAGCCCTCGAAGCTA-T--GCTTTCGGAG-AC--CTGTGTTG 120
Query 61 GTAAGATCCTCTCCTCTTCTCTCTAATGGCTTATCATCTTCATTGCGGCAAACTCCGCCT 120
| |||||||||||||||| |||||||||||| || ||||| | | |||||| || |||
Sbjct 121 GCGAGATCCTCTCCTCTTCACTCTAATGGCTTCTCTTCTTCCTCGTTGCAAACCCCTCCT 180
Query 121 TGTA 124
|||
Sbjct 181 AGTA 184
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 52459569525
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5