BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg497421 Length=772 Score E Sequences producing significant alignments: (Bits) Value AT3G24310.1 | Symbols: MYB305, ATMYB71 | myb domain protein 305... 1114 0.0 > AT3G24310.1 | Symbols: MYB305, ATMYB71 | myb domain protein 305 | chr3:8811131-8812364 REVERSE LENGTH=1049 Length=1049 Score = 1114 bits (603), Expect = 0.0 Identities = 717/769 (93%), Gaps = 19/769 (2%) Strand=Plus/Plus Query 5 TTGAGTTACATGCTAAGTGGGGCAATAGGTGGTCCACAATTGCACGTAGTTTACCGGGAA 64 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 288 TTGAGTTACATGCTAAGTGGGGCAATAGGTGGTCCACGATTGCACGTAGTTTACCGGGAA 347 Query 65 GAACAGACAACGAAATCAAGAACTATTGGCGAACCCATTTCAAGAAGAAGACAAAGTCTC 124 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 348 GAACAGACAACGAAATCAAGAACTATTGGCGAACCCATTTCAAGAAGAAGACGAAGTCTC 407 Query 125 CAACTAACAATGCGGAAAAGACGAAGAACCGAATCTTGAAGAGGCAACAATTTCAGCAGC 184 ||||||||| |||||| ||||| ||||||||||||||||||||||||||||||||||||| Sbjct 408 CAACTAACAGTGCGGAGAAGACAAAGAACCGAATCTTGAAGAGGCAACAATTTCAGCAGC 467 Query 185 AAAGACAAATGGAGTTGCAGCAAGAACAACAGTTGCTTCAATTCAATCAAATCGACATGA 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 468 AAAGACAAATGGAGTTGCAGCAAGAACAACAGTTGCTTCAATTCAATCAAATCGACATGA 527 Query 245 AAAAGATCATGTCTTTACTAGACGACGACAACAACAACAATGGTGATAATAATACCTTCA 304 ||||||||||||| |||||||| |||| ||||||||||||||| |||| ||||||| Sbjct 528 AAAAGATCATGTCGTTACTAGATGACG---ACAACAACAATGGTG---ATAACACCTTCA 581 Query 305 GCAGTAGCAGTAGCGGCAGCAGCGGTGAAGGTGGTGCGTTCTATGTGCCTCATCAGATCA 364 ||||||||||||| ||| | | || |||| || || ||||| ||||||||||||| Sbjct 582 GCAGTAGCAGTAGTGGC-G-A------AA-GTGGAGCATTATATGTACCTCATCAGATCA 632 Query 365 CACATTCAACAACAACTTCTGGTTGTGACCCAAATAGTAACGGGTACTACCCTGTGGTTC 424 |||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||| Sbjct 633 CACATTCAACAACAACTTCTGGTTGTGAACCAAATAGTAACGGGTATTACCCGGTGGTTC 692 Query 425 CGGTGACAATGCCTGAGGCTAACGTGAATGAAGATAACGCTATTTGGGACAATTTATGGA 484 |||| ||||| ||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct 693 CGGTAACAATACCTGAGGCTAATGTGAATGAAGATAACGCTATTTGGGACGGTTTATGGA 752 Query 485 ATGTGGATTTTGAAGGACAAGGAAGTTTTGGTGGTGCTGCTTGTGCCCCAAGGAAGCAAT 544 || ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | Sbjct 753 ATCTGGATTTTGAAGGACAAGGAAGTTTTGGTGGCGCTGCTTGTGCCCCAAGGAAGCACT 812 Query 545 ATTTCCAGAACATGGTCATTCCCTTCTATTAACTTGACCTTTTAAATATCTCTTATCTGC 604 ||||||||||||||||||||||||||| |||||||||||||| |||||||| | |||||| Sbjct 813 ATTTCCAGAACATGGTCATTCCCTTCTGTTAACTTGACCTTTAAAATATCT-T-ATCTGC 870 Query 605 CGGATAATGAAAGAGAAAAACTTGACCGACAAGTTAGGTCGAGTTTGAGTTTAGTTTGCG 664 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| | Sbjct 871 CGGATAATGAAAGAGAAAAACTTGACCGACAACTTAGGTCGAGTTTGAGTTTAGTTTGTG 930 Query 665 GTTTCATCTATTTGAGATTTTTGGTTTAAACATAAATAGTTTTGTTATTGAATTGTGTGT 724 ||||||| ||||||||||||||||||| |||||| ||| ||||| ||| ||||||||||| Sbjct 931 GTTTCATTTATTTGAGATTTTTGGTTTTAACATATATAATTTTGGTAT-GAATTGTGTGT 989 Query 725 GATGTAAGAAGCTCATTTGGTTT-ATCATAAAAGAGTGATGTAGTAGAA 772 ||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 990 GATGTAAGAAGCTCATTTGGTTTTATCATAAAAGAGTGATGTAGTAGAA 1038 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 37524907809 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5