BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg497449
Length=384
Score E
Sequences producing significant alignments: (Bits) Value
AT5G42567.1 | Symbols: | Protein of unknown function (DUF784) ... 268 2e-71
AT5G42565.1 | Symbols: | Encodes a ECA1 gametogenesis related ... 257 4e-68
AT3G30383.1 | Symbols: | Protein of unknown function (DUF784) ... 246 1e-64
AT3G30388.1 | Symbols: | Encodes a ECA1 gametogenesis related ... 241 5e-63
AT3G30386.1 | Symbols: | Encodes a ECA1 gametogenesis related ... 241 5e-63
AT5G34885.1 | Symbols: | Protein of unknown function (DUF784) ... 226 1e-58
AT5G42955.1 | Symbols: | Protein of unknown function (DUF784) ... 220 6e-57
AT5G34887.1 | Symbols: | Protein of unknown function (DUF784) ... 198 3e-50
AT1G45215.1 | Symbols: | Protein of unknown function (DUF784) ... 196 1e-49
AT1G45221.1 | Symbols: | Bifunctional inhibitor/lipid-transfer... 196 1e-49
AT5G34882.1 | Symbols: | Protein of unknown function (DUF784) ... 193 1e-48
AT5G34881.1 | Symbols: | Protein of unknown function (DUF784) ... 193 1e-48
AT1G45223.1 | Symbols: | Protein of unknown function (DUF784) ... 191 5e-48
AT5G34883.1 | Symbols: | Protein of unknown function (DUF784) ... 187 6e-47
AT5G34905.1 | Symbols: | Protein of unknown function (DUF784) ... 187 6e-47
AT1G57760.1 | Symbols: | Protein of unknown function (DUF784) ... 187 6e-47
AT5G34903.1 | Symbols: | Encodes a ECA1 gametogenesis related ... 182 3e-45
AT5G42957.1 | Symbols: | Protein of unknown function (DUF784) ... 178 4e-44
AT1G57775.1 | Symbols: | Protein of unknown function (DUF784) ... 178 4e-44
AT1G57777.1 | Symbols: | Protein of unknown function (DUF784) ... 176 1e-43
AT1G45211.1 | Symbols: | Encodes a ECA1 gametogenesis related ... 158 5e-38
> AT5G42567.1 | Symbols: | Protein of unknown function (DUF784)
| chr5:17018059-17018406 REVERSE LENGTH=348
Length=348
Score = 268 bits (145), Expect = 2e-71
Identities = 178/194 (92%), Gaps = 2/194 (1%)
Strand=Plus/Plus
Query 43 ATGTCTAAATTTAGCTCTCAAATTACTACGCTATTCATCGTTGTAGCTTTGGTGTGTGTG 102
||||||||||||| ||||| |||| |||| ||||||| ||||||||||||||||||| |
Sbjct 1 ATGTCTAAATTTAATTCTCAGATTAGTACGTTATTCATTGTTGTAGCTTTGGTGTGTGCG 60
Query 103 TTTGTTCCGGTTTTCTCAGTCGAAGAAGCTGAAGCAAAATCATTATGGAATACTTGTCTT 162
|||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||
Sbjct 61 TTTGTTCCGGTTTTCTCAGTCGAAGAAGCTGAAGCAAACTTATTATGGAATACTTGTCTT 120
Query 163 GTAAAAATCACTCCTAAGTGTGCGTTGGATATAATCGGTGTTGTCTTTGAAAATGGAACC 222
|| |||||||||||||||||||||||||||||| ||| || ||||||||||||||||| |
Sbjct 121 GTTAAAATCACTCCTAAGTGTGCGTTGGATATAGTCGCTGCTGTCTTTGAAAATGGAAAC 180
Query 223 AT-CTCTGATCCTT 235
|| | |||||||||
Sbjct 181 ATGC-CTGATCCTT 193
Score = 189 bits (102), Expect = 2e-47
Identities = 116/123 (94%), Gaps = 0/123 (0%)
Strand=Plus/Plus
Query 238 TGTCACGATATGCTTATTAAATATATTGCAGATAAACCCATGTTCATTGCCCACGAAACA 297
|||||||||| ||||||||| ||||||||| ||||||||||||| |||||||||||||||
Sbjct 226 TGTCACGATACGCTTATTAAGTATATTGCAAATAAACCCATGTTAATTGCCCACGAAACA 285
Query 298 GAATACTTGAAGAAGAGTGCTGACTTGTGGAATCATTGTGTCTCAATCTCGAAAAGTGCT 357
||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||||
Sbjct 286 GAATACTTGAAGAAGAGTGATGACTTGTGGAAACATTGTGTCTCAATCTCCAAAAGTGCT 345
Query 358 TGA 360
|||
Sbjct 346 TGA 348
> AT5G42565.1 | Symbols: | Encodes a ECA1 gametogenesis related
family protein [pseudogene] | chr5:17020007-17020354 REVERSE
LENGTH=348
Length=348
Score = 257 bits (139), Expect = 4e-68
Identities = 177/195 (91%), Gaps = 4/195 (2%)
Strand=Plus/Plus
Query 43 ATGTCTAAATTTAGCTCTCAAATTACTACGCTATTCATCGTTGTAGCTTTGGTGTGTGTG 102
||||||||||||| ||||| ||||||| | ||||||| ||||||||||||||||||| |
Sbjct 1 ATGTCTAAATTTAATTCTCAGATTACTATGTTATTCATTGTTGTAGCTTTGGTGTGTGCG 60
Query 103 TTTGTTCCGGTTTTCTCAGTCGAAGAAGCTGAAGCAAAATCATTATGGAATACTTGTCTT 162
|||||||||| ||||||||||||||||||||||||||| | |||||||||||||||||||
Sbjct 61 TTTGTTCCGGCTTTCTCAGTCGAAGAAGCTGAAGCAAACTTATTATGGAATACTTGTCTT 120
Query 163 -GTAAAAATCACTCCTAAGTGTGCGTTGGATATAATCGGTGTTGTCTTTGAAAATGGAAC 221
|| ||||||||||||||||||||||||||||| ||| || ||||||||||||||||||
Sbjct 121 GGT-TAAATCACTCCTAAGTGTGCGTTGGATATAGTCGCTGCTGTCTTTGAAAATGGAAC 179
Query 222 CAT-CTCTGATCCTT 235
||| | |||||||||
Sbjct 180 CATGC-CTGATCCTT 193
Score = 198 bits (107), Expect = 3e-50
Identities = 119/125 (95%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 236 TGTGTCACGATATGCTTATTAAATATATTGCAGATAAACCCATGTTCATTGCCCACGAAA 295
|||||||||||| ||||||||| ||||||||||||||||||||||| |||||||||||||
Sbjct 224 TGTGTCACGATACGCTTATTAAGTATATTGCAGATAAACCCATGTTAATTGCCCACGAAA 283
Query 296 CAGAATACTTGAAGAAGAGTGCTGACTTGTGGAATCATTGTGTCTCAATCTCGAAAAGTG 355
||||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||
Sbjct 284 CAGAATACTTGAAGAAGAGTGATGACTTGTGGAAACATTGTGTCTCAATCTCCAAAAGTG 343
Query 356 CTTGA 360
|||||
Sbjct 344 CTTGA 348
> AT3G30383.1 | Symbols: | Protein of unknown function (DUF784)
| chr3:11984655-11985002 FORWARD LENGTH=348
Length=348
Score = 246 bits (133), Expect = 1e-64
Identities = 174/194 (90%), Gaps = 2/194 (1%)
Strand=Plus/Plus
Query 43 ATGTCTAAATTTAGCTCTCAAATTACTACGCTATTCATCGTTGTAGCTTTGGTGTGTGTG 102
||||||||||||| |||||| ||||||| ||||||||| ||| ||||||||||||||| |
Sbjct 1 ATGTCTAAATTTAACTCTCAGATTACTATGCTATTCATTGTTTTAGCTTTGGTGTGTGCG 60
Query 103 TTTGTTCCGGTTTTCTCAGTCGAAGAAGCTGAAGCAAAATCATTATGGAATACTTGTCTT 162
|||||||||| ||||||| |||||||||| |||||||| | ||||||||| |||||||||
Sbjct 61 TTTGTTCCGGCTTTCTCAATCGAAGAAGCGGAAGCAAATTTATTATGGAAAACTTGTCTT 120
Query 163 GTAAAAATCACTCCTAAGTGTGCGTTGGATATAATCGGTGTTGTCTTTGAAAATGGAACC 222
|| ||||| |||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct 121 GTTAAAATTACTCCTAAGTGTGCGTTGGATATAATCGCTGCTGTCTTTGAAAATGGAACA 180
Query 223 AT-CTCTGATCCTT 235
|| | ||||||||
Sbjct 181 ATGCA-TGATCCTT 193
> AT3G30388.1 | Symbols: | Encodes a ECA1 gametogenesis related
family protein [pseudogene] | chr3:11993964-11994308 FORWARD
LENGTH=345
Length=345
Score = 241 bits (130), Expect = 5e-63
Identities = 173/194 (89%), Gaps = 2/194 (1%)
Strand=Plus/Plus
Query 43 ATGTCTAAATTTAGCTCTCAAATTACTACGCTATTCATCGTTGTAGCTTTGGTGTGTGTG 102
||||||||||||| |||||| ||||||| ||||||||| ||| ||||||||||||||| |
Sbjct 1 ATGTCTAAATTTAACTCTCAGATTACTATGCTATTCATTGTTTTAGCTTTGGTGTGTGCG 60
Query 103 TTTGTTCCGGTTTTCTCAGTCGAAGAAGCTGAAGCAAAATCATTATGGAATACTTGTCTT 162
|||||||||| ||||| |||||||||||| |||||||| | | ||||||| |||||||||
Sbjct 61 TTTGTTCCGGCTTTCTAAGTCGAAGAAGCGGAAGCAAATTTACTATGGAAAACTTGTCTT 120
Query 163 GTAAAAATCACTCCTAAGTGTGCGTTGGATATAATCGGTGTTGTCTTTGAAAATGGAACC 222
|| ||||| |||||||||||||||||||||||||||| || |||||||||||||| |||
Sbjct 121 GTTAAAATTACTCCTAAGTGTGCGTTGGATATAATCGCTGCTGTCTTTGAAAATGAAACA 180
Query 223 AT-CTCTGATCCTT 235
|| | |||||||||
Sbjct 181 ATGC-CTGATCCTT 193
> AT3G30386.1 | Symbols: | Encodes a ECA1 gametogenesis related
family protein [pseudogene] | chr3:11990241-11990588 FORWARD
LENGTH=348
Length=348
Score = 241 bits (130), Expect = 5e-63
Identities = 173/194 (89%), Gaps = 2/194 (1%)
Strand=Plus/Plus
Query 43 ATGTCTAAATTTAGCTCTCAAATTACTACGCTATTCATCGTTGTAGCTTTGGTGTGTGTG 102
||||||||||||| |||||| ||||||| ||||||||| ||| ||||||||||||||| |
Sbjct 1 ATGTCTAAATTTAACTCTCAGATTACTATGCTATTCATTGTTTTAGCTTTGGTGTGTGCG 60
Query 103 TTTGTTCCGGTTTTCTCAGTCGAAGAAGCTGAAGCAAAATCATTATGGAATACTTGTCTT 162
|||||||||| ||||| |||||||||||| |||||||| | | ||||||| |||||||||
Sbjct 61 TTTGTTCCGGCTTTCTAAGTCGAAGAAGCGGAAGCAAATTTACTATGGAAAACTTGTCTT 120
Query 163 GTAAAAATCACTCCTAAGTGTGCGTTGGATATAATCGGTGTTGTCTTTGAAAATGGAACC 222
|| ||||| |||||||||||||||||||||||||||| || |||||||||||||| |||
Sbjct 121 GTTAAAATTACTCCTAAGTGTGCGTTGGATATAATCGCTGCTGTCTTTGAAAATGAAACA 180
Query 223 AT-CTCTGATCCTT 235
|| | |||||||||
Sbjct 181 ATGC-CTGATCCTT 193
> AT5G34885.1 | Symbols: | Protein of unknown function (DUF784)
| chr5:13201475-13202185 FORWARD LENGTH=711
Length=711
Score = 226 bits (122), Expect = 1e-58
Identities = 140/149 (94%), Gaps = 0/149 (0%)
Strand=Plus/Plus
Query 236 TGTGTCACGATATGCTTATTAAATATATTGCAGATAAACCCATGTTCATTGCCCACGAAA 295
|||||||||||| ||||||||||||||||||||||||||||||||| ||||| |||||||
Sbjct 295 TGTGTCACGATACGCTTATTAAATATATTGCAGATAAACCCATGTTAATTGCTCACGAAA 354
Query 296 CAGAATACTTGAAGAAGAGTGCTGACTTGTGGAATCATTGTGTCTCAATCTCGAAAAGTG 355
||||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||
Sbjct 355 CAGAATACTTGAAGAAGAGTGATGACTTGTGGAAACATTGTGTCTCAATCTCCAAAAGTG 414
Query 356 CTTGAAATATGTATTGCTTGTACTATTTT 384
|||||||| | |||||| |||||||||||
Sbjct 415 CTTGAAATGTATATTGCGTGTACTATTTT 443
> AT5G42955.1 | Symbols: | Protein of unknown function (DUF784)
| chr5:17231842-17232324 REVERSE LENGTH=483
Length=483
Score = 220 bits (119), Expect = 6e-57
Identities = 139/149 (93%), Gaps = 0/149 (0%)
Strand=Plus/Plus
Query 236 TGTGTCACGATATGCTTATTAAATATATTGCAGATAAACCCATGTTCATTGCCCACGAAA 295
|||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 303 TGTGTCACGATACGCTTATTAAATATATTGCAGATAAACCCATGTTAATTGCCCACGAAA 362
Query 296 CAGAATACTTGAAGAAGAGTGCTGACTTGTGGAATCATTGTGTCTCAATCTCGAAAAGTG 355
||||||||||||||||||||| |||||||||||| |||||||||||||| || |||||||
Sbjct 363 CAGAATACTTGAAGAAGAGTGATGACTTGTGGAAACATTGTGTCTCAATTTCCAAAAGTG 422
Query 356 CTTGAAATATGTATTGCTTGTACTATTTT 384
||| ||||||| | ||||| |||||||||
Sbjct 423 CTTCAAATATGGAATGCTTTTACTATTTT 451
> AT5G34887.1 | Symbols: | Protein of unknown function (DUF784)
| chr5:13203494-13203841 FORWARD LENGTH=348
Length=348
Score = 198 bits (107), Expect = 3e-50
Identities = 119/125 (95%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 236 TGTGTCACGATATGCTTATTAAATATATTGCAGATAAACCCATGTTCATTGCCCACGAAA 295
|||||||||||| ||||||||||||||||||||||||||||||||| ||||| |||||||
Sbjct 224 TGTGTCACGATACGCTTATTAAATATATTGCAGATAAACCCATGTTAATTGCTCACGAAA 283
Query 296 CAGAATACTTGAAGAAGAGTGCTGACTTGTGGAATCATTGTGTCTCAATCTCGAAAAGTG 355
||||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||
Sbjct 284 CAGAATACTTGAAGAAGAGTGATGACTTGTGGAAACATTGTGTCTCAATCTCCAAAAGTG 343
Query 356 CTTGA 360
|||||
Sbjct 344 CTTGA 348
> AT1G45215.1 | Symbols: | Protein of unknown function (DUF784)
| chr1:17137703-17138231 FORWARD LENGTH=529
Length=529
Score = 196 bits (106), Expect = 1e-49
Identities = 183/220 (83%), Gaps = 6/220 (3%)
Strand=Plus/Plus
Query 6 TAAGAATAATTCTTGTACATTTCAAGCG-TAAGTAGA-TATGTCTAAATTTAGCTCTCAA 63
||||||||| || ||| ||| |||| | || | | | |||| ||| || ||||| ||
Sbjct 48 TAAGAATAAGTC-GGTAAATTCCAAG-GATACGAAAATTATGGCTAGGTTAAGCTCCCAT 105
Query 64 ATTACTACGCTATTCATCGTTGTAGCTTTGGTGTGTGTGTTTGTTCCGGT-TTTCTCAGT 122
||| | |||||||||| ||||||||||||||||||| ||||||||| || ||| || ||
Sbjct 106 GTTATTGCGCTATTCATTGTTGTAGCTTTGGTGTGTGCGTTTGTTCCTGTATTT-TCTGT 164
Query 123 CGAAGAAGCTGAAGCAAAATCATTATGGAATACTTGTCTTGTAAAAATCACTCCTAAGTG 182
|||||||||||||||||||||||||||||| |||||||| || |||||||||||||| ||
Sbjct 165 CGAAGAAGCTGAAGCAAAATCATTATGGAACACTTGTCTAGTTAAAATCACTCCTAAATG 224
Query 183 TGCGTTGGATATAATCGGTGTTGTCTTTGAAAATGGAACC 222
||| ||| ||||||| |||||| |||| ||||||||||
Sbjct 225 TGCATTGAATATAATTTATGTTGTTTTTGGAAATGGAACC 264
> AT1G45221.1 | Symbols: | Bifunctional inhibitor/lipid-transfer
protein/seed storage 2S albumin superfamily protein | chr1:17139448-17140012
FORWARD LENGTH=565
Length=565
Score = 196 bits (106), Expect = 1e-49
Identities = 183/220 (83%), Gaps = 6/220 (3%)
Strand=Plus/Plus
Query 6 TAAGAATAATTCTTGTACATTTCAAGCG-TAAGTAGA-TATGTCTAAATTTAGCTCTCAA 63
||||||||| || ||| ||| |||| | || | | | |||| ||| || ||||| ||
Sbjct 48 TAAGAATAAGTC-GGTAAATTCCAAG-GATACGAAAATTATGGCTAGGTTAAGCTCCCAT 105
Query 64 ATTACTACGCTATTCATCGTTGTAGCTTTGGTGTGTGTGTTTGTTCCGGT-TTTCTCAGT 122
||| | |||||||||| ||||||||||||||||||| ||||||||| || ||| || ||
Sbjct 106 GTTATTGCGCTATTCATTGTTGTAGCTTTGGTGTGTGCGTTTGTTCCTGTATTT-TCTGT 164
Query 123 CGAAGAAGCTGAAGCAAAATCATTATGGAATACTTGTCTTGTAAAAATCACTCCTAAGTG 182
|||||||||||||||||||||||||||||| |||||||| || |||||||||||||| ||
Sbjct 165 CGAAGAAGCTGAAGCAAAATCATTATGGAACACTTGTCTAGTTAAAATCACTCCTAAATG 224
Query 183 TGCGTTGGATATAATCGGTGTTGTCTTTGAAAATGGAACC 222
||| ||| ||||||| |||||| |||| ||||||||||
Sbjct 225 TGCATTGAATATAATTTATGTTGTTTTTGGAAATGGAACC 264
> AT5G34882.1 | Symbols: | Protein of unknown function (DUF784)
| chr5:13195705-13196052 FORWARD LENGTH=348
Length=348
Score = 193 bits (104), Expect = 1e-48
Identities = 118/125 (94%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 236 TGTGTCACGATATGCTTATTAAATATATTGCAGATAAACCCATGTTCATTGCCCACGAAA 295
|||||||| ||| ||||||||||||||||||||||||||||||||| ||||| |||||||
Sbjct 224 TGTGTCACAATACGCTTATTAAATATATTGCAGATAAACCCATGTTAATTGCTCACGAAA 283
Query 296 CAGAATACTTGAAGAAGAGTGCTGACTTGTGGAATCATTGTGTCTCAATCTCGAAAAGTG 355
||||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||
Sbjct 284 CAGAATACTTGAAGAAGAGTGATGACTTGTGGAAACATTGTGTCTCAATCTCCAAAAGTG 343
Query 356 CTTGA 360
|||||
Sbjct 344 CTTGA 348
> AT5G34881.1 | Symbols: | Protein of unknown function (DUF784)
| chr5:13197652-13197999 FORWARD LENGTH=348
Length=348
Score = 193 bits (104), Expect = 1e-48
Identities = 118/125 (94%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 236 TGTGTCACGATATGCTTATTAAATATATTGCAGATAAACCCATGTTCATTGCCCACGAAA 295
|||||||||||| ||||||||||||||||||||||||||||||||| ||||| |||||||
Sbjct 224 TGTGTCACGATACGCTTATTAAATATATTGCAGATAAACCCATGTTAATTGCTCACGAAA 283
Query 296 CAGAATACTTGAAGAAGAGTGCTGACTTGTGGAATCATTGTGTCTCAATCTCGAAAAGTG 355
||||||||||||||||||||| |||||||| ||| ||||||||||||||||| |||||||
Sbjct 284 CAGAATACTTGAAGAAGAGTGTTGACTTGTCGAAACATTGTGTCTCAATCTCCAAAAGTG 343
Query 356 CTTGA 360
|||||
Sbjct 344 CTTGA 348
> AT1G45223.1 | Symbols: | Protein of unknown function (DUF784)
| chr1:17141192-17141771 FORWARD LENGTH=580
Length=580
Score = 191 bits (103), Expect = 5e-48
Identities = 182/220 (83%), Gaps = 6/220 (3%)
Strand=Plus/Plus
Query 6 TAAGAATAATTCTTGTACATTTCAAGCGTAAGTAGA-TAT-GTCTAAATTTAGCTCTCAA 63
||||||||| || ||| ||| ||||| || | | | ||| || || | ||||| ||
Sbjct 44 TAAGAATAAGTC-GGTAAATTCCAAGCATACGAAAATTATGGT-TAGGCTAAGCTCCCAT 101
Query 64 ATTACTACGCTATTCATCGTTGTAGCTTTGGTGTGTGTGTTTGTTCCGGT-TTTCTCAGT 122
||| | |||||||||| ||||||||||||||||||| ||||||||| || ||| || ||
Sbjct 102 GTTATTGCGCTATTCATTGTTGTAGCTTTGGTGTGTGCGTTTGTTCCTGTATTT-TCTGT 160
Query 123 CGAAGAAGCTGAAGCAAAATCATTATGGAATACTTGTCTTGTAAAAATCACTCCTAAGTG 182
|||||||||||||||||||||||||||||| |||||||| || |||||||||||||| ||
Sbjct 161 CGAAGAAGCTGAAGCAAAATCATTATGGAACACTTGTCTAGTTAAAATCACTCCTAAATG 220
Query 183 TGCGTTGGATATAATCGGTGTTGTCTTTGAAAATGGAACC 222
||| ||| ||||||| |||||| |||| ||||||||||
Sbjct 221 TGCATTGAATATAATTTATGTTGTTTTTGGAAATGGAACC 260
> AT5G34883.1 | Symbols: | Protein of unknown function (DUF784)
| chr5:13199598-13199945 FORWARD LENGTH=348
Length=348
Score = 187 bits (101), Expect = 6e-47
Identities = 118/126 (94%), Gaps = 2/126 (2%)
Strand=Plus/Plus
Query 236 TGTGTCACGATAT-GCTTATTAAATATATTGCAGATAAACCCATGTTCATTGCCCACGAA 294
||||||||||| | ||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct 224 TGTGTCACGAT-TCGCTTATTAAATATATTGCAGATAAACCCATGTTAATTGCTCACGAA 282
Query 295 ACAGAATACTTGAAGAAGAGTGCTGACTTGTGGAATCATTGTGTCTCAATCTCGAAAAGT 354
||||||||||| |||||||||| |||||||||||| ||||||||||||||||| ||||||
Sbjct 283 ACAGAATACTTAAAGAAGAGTGATGACTTGTGGAAACATTGTGTCTCAATCTCCAAAAGT 342
Query 355 GCTTGA 360
||||||
Sbjct 343 GCTTGA 348
> AT5G34905.1 | Symbols: | Protein of unknown function (DUF784)
| chr5:13223133-13223480 FORWARD LENGTH=348
Length=348
Score = 187 bits (101), Expect = 6e-47
Identities = 117/125 (94%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 236 TGTGTCACGATATGCTTATTAAATATATTGCAGATAAACCCATGTTCATTGCCCACGAAA 295
|||||||||||| ||||||||||||||||||||||||||||||||| ||||| |||||||
Sbjct 224 TGTGTCACGATACGCTTATTAAATATATTGCAGATAAACCCATGTTAATTGCTCACGAAA 283
Query 296 CAGAATACTTGAAGAAGAGTGCTGACTTGTGGAATCATTGTGTCTCAATCTCGAAAAGTG 355
||||||||||||||| |||| |||||||||||| ||||||||||||||||| |||||||
Sbjct 284 TAGAATACTTGAAGAAAAGTGATGACTTGTGGAAACATTGTGTCTCAATCTCCAAAAGTG 343
Query 356 CTTGA 360
|||||
Sbjct 344 CTTGA 348
> AT1G57760.1 | Symbols: | Protein of unknown function (DUF784)
| chr1:21390003-21390565 FORWARD LENGTH=563
Length=563
Score = 187 bits (101), Expect = 6e-47
Identities = 157/184 (85%), Gaps = 4/184 (2%)
Strand=Plus/Plus
Query 41 ATATGTCTAAATTTAGCTCTCAAATTACTACGCTATTCATCGTTGTAGCTTTGGTGTGTG 100
||||| ||||| | ||||| || ||||| |||||||||| |||| | ||||||||||||
Sbjct 78 ATATGGCTAAACTAAGCTCCCATGTTACTGCGCTATTCATTGTTGCAACTTTGGTGTGTG 137
Query 101 TGTTTGTTCCGGT--TTTCTCAGTCGAAGAAGCTGAAGCAAAATCATTATGGAATACTTG 158
|||| |||| || ||||| |||||||||||||||||||||||||||||||| |||||
Sbjct 138 CGTTTATTCCTGTAATTTCT--GTCGAAGAAGCTGAAGCAAAATCATTATGGAACACTTG 195
Query 159 TCTTGTAAAAATCACTCCTAAGTGTGCGTTGGATATAATCGGTGTTGTCTTTGAAAATGG 218
||| || |||||||||||||| ||||| ||| |||||||| |||||| |||| ||||||
Sbjct 196 TCTCGTTAAAATCACTCCTAAATGTGCATTGAATATAATCTATGTTGTTTTTGGAAATGG 255
Query 219 AACC 222
||||
Sbjct 256 AACC 259
> AT5G34903.1 | Symbols: | Encodes a ECA1 gametogenesis related
family protein [pseudogene] | chr5:13221190-13221537 FORWARD
LENGTH=348
Length=348
Score = 182 bits (98), Expect = 3e-45
Identities = 116/125 (93%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 236 TGTGTCACGATATGCTTATTAAATATATTGCAGATAAACCCATGTTCATTGCCCACGAAA 295
||||| |||||| ||||||||||||||||| ||||||||||||||| ||||| |||||||
Sbjct 224 TGTGTTACGATACGCTTATTAAATATATTGTAGATAAACCCATGTTAATTGCTCACGAAA 283
Query 296 CAGAATACTTGAAGAAGAGTGCTGACTTGTGGAATCATTGTGTCTCAATCTCGAAAAGTG 355
||||||||||||||||||||| |||||||| ||| ||||||||||||||||| |||||||
Sbjct 284 CAGAATACTTGAAGAAGAGTGATGACTTGTCGAAACATTGTGTCTCAATCTCCAAAAGTG 343
Query 356 CTTGA 360
|||||
Sbjct 344 CTTGA 348
> AT5G42957.1 | Symbols: | Protein of unknown function (DUF784)
| chr5:17233599-17234132 REVERSE LENGTH=354
Length=354
Score = 178 bits (96), Expect = 4e-44
Identities = 110/117 (94%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 236 TGTGTCACGATATGCTTATTAAATATATTGCAGATAAACCCATGTTCATTGCCCACGAAA 295
|||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 224 TGTGTCACGATACGCTTATTAAATATATTGCAGATAAACCCATGTTAATTGCCCACGAAA 283
Query 296 CAGAATACTTGAAGAAGAGTGCTGACTTGTGGAATCATTGTGTCTCAATCTCGAAAA 352
|||||||||||||||||||| |||||||||||| |||||||||||||| || ||||
Sbjct 284 GAGAATACTTGAAGAAGAGTGATGACTTGTGGAAACATTGTGTCTCAATTTCCAAAA 340
> AT1G57775.1 | Symbols: | Protein of unknown function (DUF784)
| chr1:21399618-21400068 REVERSE LENGTH=451
Length=451
Score = 178 bits (96), Expect = 4e-44
Identities = 154/182 (85%), Gaps = 4/182 (2%)
Strand=Plus/Plus
Query 43 ATGTCTAAATTTAGCTCTCAAATTACTA-CGCTATTCATCGTTGTAGCTTTGGTGTGTGT 101
||| ||||| | |||||||| |||| | || ||||||| ||||||||||| |||||||
Sbjct 1 ATGGCTAAACTAAGCTCTCATGTTAC-AGCGTTATTCATTGTTGTAGCTTTAGTGTGTGC 59
Query 102 GTTTGTTCCGGT-TTTCTCAGTCGAAGAAGCTGAAGCAAAATCATTATGGAATACTTGTC 160
|||| ||| || ||| || |||||||||||||||||||||||||||||||| |||||||
Sbjct 60 GTTTAATCCTGTATTT-TCTGTCGAAGAAGCTGAAGCAAAATCATTATGGAACACTTGTC 118
Query 161 TTGTAAAAATCACTCCTAAGTGTGCGTTGGATATAATCGGTGTTGTCTTTGAAAATGGAA 220
| || |||||||||||||| ||||| ||| |||||||| ||| || |||| ||||||||
Sbjct 119 TCGTTAAAATCACTCCTAAATGTGCATTGAATATAATCTATGTAGTTTTTGGAAATGGAA 178
Query 221 CC 222
||
Sbjct 179 CC 180
> AT1G57777.1 | Symbols: | Protein of unknown function (DUF784)
| chr1:21401235-21401798 REVERSE LENGTH=564
Length=564
Score = 176 bits (95), Expect = 1e-43
Identities = 155/184 (84%), Gaps = 4/184 (2%)
Strand=Plus/Plus
Query 41 ATATGTCTAAATTTAGCTCTCAAATTACTA-CGCTATTCATCGTTGTAGCTTTGGTGTGT 99
||||| ||||| | |||||||| |||| | || ||||||| ||||||||||| ||||||
Sbjct 81 ATATGGCTAAACTAAGCTCTCATGTTAC-AGCGTTATTCATTGTTGTAGCTTTAGTGTGT 139
Query 100 GTGTTTGTTCCGGT-TTTCTCAGTCGAAGAAGCTGAAGCAAAATCATTATGGAATACTTG 158
| |||| ||| || ||| || |||||||||||||||||||||||||||||||| |||||
Sbjct 140 GCGTTTAATCCTGTATTT-TCTGTCGAAGAAGCTGAAGCAAAATCATTATGGAACACTTG 198
Query 159 TCTTGTAAAAATCACTCCTAAGTGTGCGTTGGATATAATCGGTGTTGTCTTTGAAAATGG 218
||| || |||||||||||||| ||||| || |||||||| ||| || |||| ||||||
Sbjct 199 TCTCGTTAAAATCACTCCTAAATGTGCACTGAATATAATCTATGTAGTTTTTGGAAATGG 258
Query 219 AACC 222
||||
Sbjct 259 AACC 262
> AT1G45211.1 | Symbols: | Encodes a ECA1 gametogenesis related
family protein [pseudogene] | chr1:17136065-17136392 FORWARD
LENGTH=328
Length=328
Score = 158 bits (85), Expect = 5e-38
Identities = 132/154 (86%), Gaps = 5/154 (3%)
Strand=Plus/Plus
Query 71 CGCTATTCATC-GTTGTAGCTTTGGTGTGTGTGTTTGTTCCGGT-TTTCTCAGTCGAAGA 128
||||||||| | ||||||||||||||||||| ||||||||| || ||| | ||||||||
Sbjct 10 CGCTATTCA-CTGTTGTAGCTTTGGTGTGTGCGTTTGTTCCTGTATTT-TTTGTCGAAGA 67
Query 129 AGCTGAAGCAAAATCATTATGGAATACTTGTCTTGTAAAAATCACTCCTAAGTGTGCGTT 188
||||||||||||||||||||| || |||||||| || |||||||||||||| | || ||
Sbjct 68 AGCTGAAGCAAAATCATTATGAAACACTTGTCTAGTTAAAATCACTCCTAAATTTGAATT 127
Query 189 GGATATAATCGGTGTTGTCTTTGAAAATGGAACC 222
| ||||||| |||||| ||||||| |||||||
Sbjct 128 GAATATAATTTATGTTGTTTTTGAAA-TGGAACC 160
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 18096389640
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5