BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg497514
Length=2166
Score E
Sequences producing significant alignments: (Bits) Value
AT5G38350.1 | Symbols: | Disease resistance protein (NBS-LRR c... 2577 0.0
AT5G38340.1 | Symbols: | Disease resistance protein (TIR-NBS-L... 1061 0.0
AT3G25510.1 | Symbols: | disease resistance protein (TIR-NBS-L... 893 0.0
AT1G65850.2 | Symbols: | Disease resistance protein (TIR-NBS-L... 872 0.0
AT3G03855.1 | Symbols: | pseudogene of disease resistance prot... 313 6e-84
AT1G57650.1 | Symbols: | ATP binding | chr1:21351291-21354311 ... 159 8e-38
AT4G36140.1 | Symbols: | disease resistance protein (TIR-NBS-L... 122 1e-26
> AT5G38350.1 | Symbols: | Disease resistance protein (NBS-LRR
class) family | chr5:15328659-15331528 FORWARD LENGTH=2502
Length=2502
Score = 2577 bits (1395), Expect = 0.0
Identities = 1938/2191 (88%), Gaps = 74/2191 (3%)
Strand=Plus/Plus
Query 1 CATTTAGGAGTTGCACAAGATAGGTTGAACGACAAGAGGGTGCTTATTGTTCTTGATAGC 60
||||||||||||||||| ||||||||||||||||||| |||||||||||||| ||||||
Sbjct 361 CATTTAGGAGTTGCACAGGATAGGTTGAACGACAAGAAAGTGCTTATTGTTCTCGATAGC 420
Query 61 ATTGATCAATCAATACAACTAGATGCTATCGCAAAAGAAACTCGGTGGTTCGGTCATGGA 120
|||||||| |||||||||||||||||||| |||||||||||||||||||| || ||||||
Sbjct 421 ATTGATCAGTCAATACAACTAGATGCTATTGCAAAAGAAACTCGGTGGTTTGGCCATGGA 480
Query 121 AGTCGGATTATCATCACAACACAAGACCAACGGCTTTTGAAGGCACATGGCATCAACCAT 180
|||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||
Sbjct 481 AGTCGGATTATCATCACAACACAAGACCAAAAACTTTTGAAGGCACATGGAATCAACCAT 540
Query 181 ATTTACAAGGTGGAGTTTCCATCAGCATATGAAGCTTATCAGATGTTTTGTATGTATGCT 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 541 ATTTACAAGGTGGAGTTTCCATCAGCATATGAAGCTTATCAGATGTTTTGTATGTATGCT 600
Query 241 TTTGACCAAAACTTCCCTAAAGATGGTTTCGAGGAGCTTGCATGGCAAGTTACAAAACTT 300
|||| ||||||||||||||| |||||||||||||||||||| ||| ||||||||||||||
Sbjct 601 TTTGGCCAAAACTTCCCTAATGATGGTTTCGAGGAGCTTGCTTGGGAAGTTACAAAACTT 660
Query 301 TTAGGTAATCTACCTTTGGGACTAAGAGTTATGGGATCCCACTTCCGAGGAATGTCTAGG 360
|||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 661 TTAGGTCATCTACCTTTGGGACTAAGAGTTATGGGTTCCCACTTCCGAGGAATGTCTAGG 720
Query 361 CATGAGTGGGTAAATGCATTACCAAGGTTAAAGATTCGCCTTGATGCTAGTATTCAAAGC 420
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 721 CATGAGTGGGTAAATGCTTTACCAAGGTTAAAGATTCGCCTTGATGCTAGTATTCAAAGC 780
Query 421 ATTTTAAAGTTCAGTTACGATGCCTTATGTGATGAAGATAAAGATTTATTCCTTCATATA 480
|||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct 781 ATTTTAAAGTTCAGTTACGATGCCTTATGTGAGGAAGATAAAGATTTGTTCCTTCATATA 840
Query 481 GCCTGCCTTTTCAACAATGACGGAATGGTG-AA----A-GATTATCTTGCTTTAAGTTTC 534
|| ||||||||||||||| | | ||||||| || | |||||||||||||||||||||
Sbjct 841 GCTTGCCTTTTCAACAATCAAGAAATGGTGGAAGTTGAAGATTATCTTGCTTTAAGTTTC 900
Query 535 TTAGATGTGAGGCAAGGGCTTCACCTCTTAGCTGAGAAATCTCTCATAGCAT-T-AGAGA 592
|| || |||||||||||| ||||||||||||| ||||||||||||||| || | | ||
Sbjct 901 TTGGACGTGAGGCAAGGGTTTCACCTCTTAGCCGAGAAATCTCTCATAA-ATCTTA-AG- 957
Query 593 TTTTT-TCTGCTGACTATACACATATAAAGATGCACAATCTATTAGTGCAATTAGGTAGA 651
||||| ||| || ||| ||||| |||| |||||||||||||| ||||||||||||||| |
Sbjct 958 TTTTTATCTACTAACTGTACACGTATAGAGATGCACAATCTACTAGTGCAATTAGGTAAA 1017
Query 652 GACATTGTCCGTCATAAGCCTGGGCACCAATCCATTTGTGCGCCTGGGAAGCGTCAATTT 711
|||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1018 GACATTGTTCGTCATAAGCCTGGGCACCAATCCATTTGTGAGCCTGGGAAGCGTCAATTT 1077
Query 712 TTGGTTGATGCTAGAGATATTTGTGAAGTACTCACTGATAACACGGGTAGTAGAAATGTT 771
||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1078 TTGATTGATGCTAGAGATATTTGTGAAGTACTCACTGATAACACGGGTAATAGAAATGTT 1137
Query 772 ATAGGTATACTTTTCGAGGTAT-ATACCCTATCAGGCGAATTAAATATCAGTGAGAGAGC 830
|||||||| |||| || ||| | ||| ||||| || |||||||||| |||||||||||
Sbjct 1138 GTAGGTATATTTTTGGAAGTAAGAAACC-TATCATGCCAATTAAATATAAGTGAGAGAGC 1196
Query 831 TTTTGAAGGAATGTCTAACCTCAAGTTCTTAAGATTCCATGGCCCATATGACGGCCAAAG 890
|||||| |||||||| ||||| || |||||||||||||||| ||||||||||| | ||||
Sbjct 1197 TTTTGACGGAATGTCAAACCTTAAATTCTTAAGATTCCATGACCCATATGACGACGAAAG 1256
Query 891 CGATAAATTGTACTTACCGCAAGGGTTGAATAATCTACCTCGGAAACTTAGATTAATAGA 950
|||||||||||||| || |||||||||||||||||||||| ||||||||||||||||||
Sbjct 1257 TGATAAATTGTACTTGCCACAAGGGTTGAATAATCTACCTCAGAAACTTAGATTAATAGA 1316
Query 951 ATGGAGCCG-TTTCCCAATGAAATGTTTGCCTTCCAATTTTTGTACGAAGTATCTAGTCC 1009
||||||||| ||||| | ||| ||||||||||| ||||||||||||||||||||||||
Sbjct 1317 ATGGAGCCGGTTTCCGA-TGACTTGTTTGCCTTCTAATTTTTGTACGAAGTATCTAGTCG 1375
Query 1010 ATATA-GATATGTGGAACAGCAAACTTGAGAACTTGTGGCAAGGAAATCAGCCCCTTGGA 1068
| ||| | |||| ||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1376 AGATACG-TATGAAGAACAGCAAACTTCAGAACTTGTGGCAAGGAAATCAGCCCCTTGGA 1434
Query 1069 AATCTCAAGAGGATGGATTTGCGTGAGTCTAAACACCTAAAAGAGTTACCTAATCTCTCA 1128
||||||||||||||||||||| ||||||| |||||||||||||| ||||| ||||||||
Sbjct 1435 AATCTCAAGAGGATGGATTTGAGTGAGTCGAAACACCTAAAAGAACTACCTGATCTCTCA 1494
Query 1129 ACTGCCACTAACCTTGAGA-ACTTGACTCTGTTTGGATGC-TCAAGTTTGGCGGAGCTCC 1186
||||||||||||||||| | | |||| | ||| ||||||| | |||||||| ||||||||
Sbjct 1495 ACTGCCACTAACCTTGA-ATATTTGATTATGTCTGGATGCAT-AAGTTTGGTGGAGCTCC 1552
Query 1187 CCTCCTCTCTTGGAAACCTTCAAAAATTGC-AAGAGTTGAGATTACAAGGATGCTCAACG 1245
|||||||| ||||||| |||| ||||||| || |||||| |||| ||| || |
Sbjct 1553 CCTCCTCTATTGGAAAGCTTCGTAAATTGCTAAT-GTTGAGTTTACGAGG---CT----G 1604
Query 1246 TTAGACTTACAAGGATGCTCAAAGCTAGAGGCTCTTCCTACTAATATCAACTTGGAATCT 1305
|| ||| | ||| | | || | ||||||| || ||||||||||||||||||
Sbjct 1605 -----CT--CAA--A-GCT-A--G--AG-G-CTCTTCCAACCAATATCAACTTGGAATCT 1647
Query 1306 CTCAATAACCTTGATCTCACCGCTTGCTTACTGATCAAAAGTTTTCCGGAGATCTCCACA 1365
||| || ||||||||||||| | ||||||| ||||||||| ||||| |||||||| |||
Sbjct 1648 CTCGATTACCTTGATCTCACTGATTGCTTATTGATCAAAAAATTTCCTGAGATCTCTACA 1707
Query 1366 AACATCAAGGATCTCATGCTCATGAAAACTGCAATAAAAGAAGTGCCTTCGACGATCAAG 1425
||||| |||||||||| ||||| |||||||||||||||||| || |||||||||||||||
Sbjct 1708 AACATTAAGGATCTCAAGCTCACGAAAACTGCAATAAAAGAGGTACCTTCGACGATCAAG 1767
Query 1426 TCATGGTCTCATCTTCGTAA-CTTGGAAATGTCATACAATGACAATCTCAAGGAATTCCC 1484
|||||||||||||||||||| || |||||||||||||| ||| || ||||||||| ||||
Sbjct 1768 TCATGGTCTCATCTTCGTAAACT-GGAAATGTCATACAGTGAAAACCTCAAGGAACTCCC 1826
Query 1485 ACATGCTCTCGATATCATCACAAAGCTTTACTTTAACGATACAGAAATACAAGAAATTCC 1544
|||||||| ||||||||||||| ||| ||| |||||||||||||||| |||||||||||
Sbjct 1827 GCATGCTCTTGATATCATCACAACGCTGTACATTAACGATACAGAAATGCAAGAAATTCC 1886
Query 1545 TCTGTGGGTTAAGAAAATCTCTCGTCTTCAGACACTTGTACTAAAGGGATGCAAGAGGCT 1604
|| |||||||||||||||||||| |||||||||||||| ||| ||||||||||||||||
Sbjct 1887 TCAGTGGGTTAAGAAAATCTCTCATCTTCAGACACTTGGGCTAGAGGGATGCAAGAGGCT 1946
Query 1605 GGTAACAATCCCACAACTTTCAGATTCCTTATCA-AATGTAATAGCCATAAATTGCCAGT 1663
|||||||||||||||||||||||||||| ||||| || || | | | ||| || |||
Sbjct 1947 GGTAACAATCCCACAACTTTCAGATTCCCTATCACAAC-TAGTGGTAACAAACTGTGAGT 2005
Query 1664 CACTGGAGAGACTTGATTTCTCCTTTCACAATCATCCAGAAAGATATCTCAGGTTTATTA 1723
|| ||||||||||| ||||||||||||| ||||||||||| |||| |||| ||||| | |
Sbjct 2006 CATTGGAGAGACTTAATTTCTCCTTTCAAAATCATCCAGAGAGATTTCTCTGGTTTCTAA 2065
Query 1724 ATTGCTTCAAGCTGAATAATGAAGCGAGAGAATTCATCCAGACTAGTAGTAGTACCTCA- 1782
||||||||||||| |||||||||||||||||||||||||| |||||||||| || ||
Sbjct 2066 ATTGCTTCAAGCTAAATAATGAAGCGAGAGAATTCATCCAAACTAGTAGTA---CC-CAT 2121
Query 1783 GCGTTCTTACCC-GCTAGAGAAGTGCCCGCAAACTTCACTTACCGAGCTAATGGGAGTTT 1841
||| ||||||| | |||||||||||| |||||||||||||||||||||||||||||||
Sbjct 2122 GCGATCTTACCTAG-TAGAGAAGTGCCTGCAAACTTCACTTACCGAGCTAATGGGAGTTC 2180
Query 1842 CATAATGGTAAATTTGAACCAAAGGCCTCTTTCTACGACCTTGAGATTTAAGGCTTGCGT 1901
||||||||||||| |||| || |||||||||||||| || ||||||||||||||||||||
Sbjct 2181 CATAATGGTAAATCTGAATCATAGGCCTCTTTCTACAACTTTGAGATTTAAGGCTTGCGT 2240
Query 1902 CTTGCTGGATAAAAAAGTTGACAATGACAAGGAGTAGGCCGCCGCTAGG-GAAACAAATG 1960
|||||| | ||||||| |||||||||| |||||| ||||||| | |||| ||| ||| ||
Sbjct 2241 CTTGCTAGTTAAAAAAATTGACAATGATAAGGAGGAGGCCGCTGATAGGAGAA-CAACTG 2299
Query 1961 TGTTTC-TGAGCATCAGGGAGAAAGATAAAATTGGCGTCGATGTTTCATGCAGACCTGCA 2019
| ||| | || ||||||||||| ||||||||||||||||||||| |||| || | |
Sbjct 2300 TAATTCCT-AGAATCAGGGAGAACGATAAAATTGGCGTCGATGTTCCATG--GA---G-A 2352
Query 2020 TATTGCTTTCTCGTGCCTCCCATTTTAAGA-GAGCATTTGCTCATCTTTGAGTTTGAAGC 2078
||| |||||| ||||||| |||||||| || || |||||||||| ||| | |||||||
Sbjct 2353 TATCGCTTTCACGTGCCTACCATTTTA-GAAGACCATTTGCTCACCTTCCAAATTGAAGC 2411
Query 2079 TGATGTGACGTGCAACGAGCTTTTAttttttttCGGCATCCAGGGTAACGA--A-GCGGT 2135
||||||||||| |||| |||||||||||| |||| |||| ||| ||| | | |||||
Sbjct 2412 TGATGTGACGTCCAACAAGCTTTTATTTTCGTTCGACATCAAGGACAACAACCAAGCGGT 2471
Query 2136 GATAAAAGAATGTGGAGTACTCCAACTCTAA 2166
||| |||||||||||||||||||||||||||
Sbjct 2472 GATTAAAGAATGTGGAGTACTCCAACTCTAA 2502
> AT5G38340.1 | Symbols: | Disease resistance protein (TIR-NBS-LRR
class) family | chr5:15320507-15324061 FORWARD LENGTH=3180
Length=3180
Score = 1061 bits (574), Expect = 0.0
Identities = 1015/1223 (83%), Gaps = 49/1223 (4%)
Strand=Plus/Plus
Query 1 CATTTAGGAGTTGCACAAGATAGGTTGAACGACAAGAGGGTGCTTATTGTTCTTGATAGC 60
||||||||||||| || ||||||||||| ||||| | ||||||||||| |||||||||
Sbjct 979 CATTTAGGAGTTGTACCTGATAGGTTGAAGGACAATAAAGTGCTTATTGTCCTTGATAGC 1038
Query 61 ATTGATCAATCAATACAACTAGATGCTATCGCAAAAGAAACTCGGTGGTTCGGTCATGGA 120
||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||
Sbjct 1039 ATTGATCAATCAATACAACTAGATGCTATCGCAAAAGAAACTCAATGGTTCGGTCCTGGG 1098
Query 121 AGTCGGATTATCATCACAACACAAGACCAACGGCTTTTGAAGGCACATGGCATCAACCAT 180
|||||||||||||||||||| ||||||||| ||| || ||||||||| ||||||| ||
Sbjct 1099 AGTCGGATTATCATCACAACGCAAGACCAAAAACTTCTGGAGGCACATGACATCAACAAT 1158
Query 181 ATTTACAAGGTGGAGTTTCCATCAGCATATGAAGCTTATCAGATGTTTTGTATGTATGCT 240
|||||||||||||||||||||||| ||||||||||| ||| || ||||||| |||||||
Sbjct 1159 ATTTACAAGGTGGAGTTTCCATCAAAATATGAAGCTTTTCAAATCTTTTGTACGTATGCT 1218
Query 241 TTTGACCAAAACTTCCCTAAAGATGGTTTCGAGGAGCTTGCATGGCAAGTTACAAAACTT 300
|||| ||||| ||||||||||||||||| ||| ||||||| ||| |||||||| | |||
Sbjct 1219 TTTGGTCAAAATTTCCCTAAAGATGGTTTTGAGAAGCTTGCTTGGGAAGTTACAGACCTT 1278
Query 301 TTAGGT-AATCTACCTTTGGGACTAAGAGTTATGGGATCCCACTTCCGAGGAATGTCTA- 358
|||||| || ||||| |||||||||||||||||||| |||||||||||| |||||||||
Sbjct 1279 TTAGGTGAA-CTACCATTGGGACTAAGAGTTATGGGCTCCCACTTCCGAAGAATGTCTAA 1337
Query 359 GGCATGAGTGGGTAAATGCATTACCAAGGTTAAAGATTCGCCTTGATGCTAGTATTCAAA 418
|| |||| ||||||| |||||||||||||||||||| |||||||||||||| ||||||||
Sbjct 1338 GG-ATGATTGGGTAATTGCATTACCAAGGTTAAAGACTCGCCTTGATGCTAATATTCAAA 1396
Query 419 GCATTTTAAAGTTCAGTTACGATGCCTTATGTGATGAAGATAAAGATTTATTCCTTCATA 478
||||||| ||||| ||||||||||| |||| | ||||||||||||||||||||||||||
Sbjct 1397 GCATTTTGAAGTTTAGTTACGATGCTTTATCTCCTGAAGATAAAGATTTATTCCTTCATA 1456
Query 479 TAGCCTGCCTTTTCAACAATGACGGAATGGTGAAAG---A---TTATCTTGCTTTA-AGT 531
|||| ||||||||||||||||| | ||| ||||||| | ||||||||||||| | |
Sbjct 1457 TAGCATGCCTTTTCAACAATGAAGAAATAGTGAAAGTCGAAGATTATCTTGCTTTAGA-T 1515
Query 532 TTCTTAGATGTGAGGCAAGGGCTTCACCTCTTAGCTGAGAAATCTCTCATAGCAT-TAGA 590
||||| |||| |||||| |||||||||||||||||||||||||||||||| | || | ||
Sbjct 1516 TTCTTGGATGCGAGGCATGGGCTTCACCTCTTAGCTGAGAAATCTCTCATTG-ATCTCGA 1574
Query 591 GATTTTTTCTGCTGACTATACA-CATATAAAGATGCACAATCTATTAGTGCAATTAGGTA 649
| | || || || | | | || ||| ||||| |||||| ||| ||||| ||||
Sbjct 1575 -AGGTGTTAA-CT-ACAA-AGTGC-TA-AAA-ATGCATAATCTACTAGAACAATTGGGTA 1627
Query 650 GAGACATTGTCCGTCATAAGCCTGGG-CACCAATCCATTTGTGCGCCTGGGAAGCGTCAA 708
||| ||||||||| || | || || ||||| || || ||| ||||| ||||||||
Sbjct 1628 AAGAAATTGTCCGTTATCATCC-GGCACACCACTCAATCCGTGAGCCTGAAAAGCGTCAG 1686
Query 709 TTTTTGGTTGATGCTAGAGATATTTGTGAAGTACTCACTGATAACACGGGTAGTAGAAA- 767
|||||||||||| ||| ||||||||||||||||||| | ||| ||||||||||| |||
Sbjct 1687 TTTTTGGTTGATACTAAAGATATTTGTGAAGTACTCGCCGATGGCACGGGTAGTA-AAAG 1745
Query 768 TGTTATAGGTATACT-TTTCGAGGTATATACCCTATCAGGCGA-ATTAAATATCAGTGAG 825
| ||| ||||||| | |||||| || ||| ||||||||| || ||||||||| ||||||
Sbjct 1746 TATTAAAGGTATA-TGTTTCGACTTAGATAACCTATCAGG-GAGATTAAATATAAGTGAG 1803
Query 826 AGAGCTTTTGAAGGAATGTCTAACCTCAAGTTCTTAAGA-TTCCATGGCCCATATGACGG 884
|||||||||||||||||| ||||||| || ||||||||| ||| || | | ||| |
Sbjct 1804 AGAGCTTTTGAAGGAATGACTAACCTTAAATTCTTAAGAGTTC--TG----AGA-GACCG 1856
Query 885 CCAAAGCGATAAATTGTACTTACCGCAAGGGTTGAATAATCTACCTCGGAAACTTAGATT 944
|| |||| || ||||||||||||||||| || ||| |||||||| ||||||||||||
Sbjct 1857 --AA-GCGAGAAGTTGTACTTACCGCAAGGTTTAAATTATCTACCTAAGAAACTTAGATT 1913
Query 945 AATAGAATGGAGCCG-TTTCCCAATGAAATGTTTGCCTTCCAATTTTTGTACGAA-GTAT 1002
|||||||||| | | ||| || |||||| |||||||||| || |||||||| || |||
Sbjct 1914 AATAGAATGG-GACTATTTTCCGATGAAAAGTTTGCCTTCAAACTTTTGTAC-AACGTAC 1971
Query 1003 CTAGTCCATATAGATATGTGGAACAGCAAACTTGAGAACTTGTGGCAAGGAAATCAGCCC 1062
|||||| | || ||||| |||| |||||||||||||| || ||| ||||||| |||||
Sbjct 1972 CTAGTCAACCTACATATGCGGAAAAGCAAACTTGAGAAGTTATGGGAAGGAAAACAGCCA 2031
Query 1063 CTTGGAAATCTCAAGAGGATGGATTTGCGTGAGTCTA-AACACCTAAAAGAGTTACCTAA 1121
||||| || || ||| ||||| |||| || | || | || ||||||| ||| ||||| |
Sbjct 2032 CTTGGTAACCTGAAGTGGATGAATTTAAGTAACTCGAGAA-ACCTAAAGGAGCTACCTGA 2090
Query 1122 TCTCTCAACTGCCACTAACCTTGA-GAACTTGACTCTGTTTGGATGCTCAAGTTTGGCGG 1180
||||||||| || ||||| ||| | || |||| ||| | ||||||| || |||| ||
Sbjct 2091 TCTCTCAACAGCTACTAAACTTCAAGAT-TTGAATCTCACTAGATGCTCCAGCTTGGTGG 2149
Query 1181 AGCTCCCCTCCTCTCTTGGAAAC 1203
|| | || | |||| ||||||||
Sbjct 2150 AGATTCCTTTCTCTATTGGAAAC 2172
Score = 597 bits (323), Expect = 1e-169
Identities = 742/941 (79%), Gaps = 41/941 (4%)
Strand=Plus/Plus
Query 1245 GTT-AGACTTACAAGGATGCTCAAAGCTAGAGGCTCTTCCTACTAATATCAACTTGGAAT 1303
||| ||| |||| |||||||||||||||||||| |||||| || || |||| ||||||||
Sbjct 2262 GTTGAGA-TTACGAGGATGCTCAAAGCTAGAGGTTCTTCCCACCAACATCAGCTTGGAAT 2320
Query 1304 CTCTCAATAACCTTGATCTCACCGCTTGCTTACTGATCAAAAGTTTTCCGGAGATCTCCA 1363
||||| ||||||||||| |||| | ||||| |||| | ||||||||||| || |||||||
Sbjct 2321 CTCTCGATAACCTTGATATCACTGATTGCTCACTGTTGAAAAGTTTTCCTGATATCTCCA 2380
Query 1364 CAAACATCAAGGATCTCATG-CTCATGAAAACTGCAATAAAAGAAGTGCCTTCGACGATC 1422
||||||| ||| |||||| | ||| || ||||||||| || |||||||| |||| ||||
Sbjct 2381 CAAACATTAAGCATCTCA-GCCTCGCGAGAACTGCAATTAATGAAGTGCCGTCGAGGATC 2439
Query 1423 AAGTCATGGTCTCATCTTCGTAACTTGGAAATGTCATACAATGACAATCTCAAGGAATTC 1482
||||||||||||| ||||||| |||| | | ||||||||||||| || ||||||||| ||
Sbjct 2440 AAGTCATGGTCTCGTCTTCGTTACTTTGTAGTGTCATACAATGAAAACCTCAAGGAA-TC 2498
Query 1483 -CCACATGCTCTCGATATCATCACAAAGCTT-TAC-TTTAACGATACAGAAATACAAGAA 1539
|| || ||||| |||| |||||||| | || | | | |||||||||| |||| |||| |
Sbjct 2499 TCCGCACGCTCTTGATACCATCACAATG-TTGT-CGTCTAACGATACAAAAATGCAAG-A 2555
Query 1540 ATT-CCTCTGTGGGTTAAGAAAATCTCTCGTCTTCAGACACTTGTACTAAAGGGATGCAA 1598
||| |||| |||||| |||||||||||||||||| |||| ||| | ||| ||||||||||
Sbjct 2556 ATTACCTCGGTGGGTCAAGAAAATCTCTCGTCTTGAGACGCTTATGCTAGAGGGATGCAA 2615
Query 1599 GAGGCTGGTAACAATCCCACAACTTTCAGATTCCTTATCAAATGTAATAGCCATAAATTG 1658
| ||||||||| ||||| ||||| | |||||||||||||| || | ||||||||
Sbjct 2616 AAACCTGGTAACACTCCCAGAACTTCCGGATTCCTTATCAAACATAGGGGTAATAAATTG 2675
Query 1659 CCAGTCACTGGAGAGACTTGATT-TCTCCTTTC-ACAATCATCCAGAA-A-GATATCTCA 1714
| ||||||| ||||| ||||||| | ||| ||| |||| |||||| || | | | | ||
Sbjct 2676 CGAGTCACTAGAGAGGCTTGATTGT-TCC-TTCTACAAACATCCA-AATATG-TTTATCG 2731
Query 1715 GGTTTATTAATTGCTTCAAGCTGAATAATGAAGCGAGAGAATTCATCCAGACTAGTAGTA 1774
||||| |||| ||||| ||||||||||| |||||||||||| |||||||||| |||||||
Sbjct 2732 GGTTTGTTAACTGCTTGAAGCTGAATAAAGAAGCGAGAGAACTCATCCAGACCAGTAGTA 2791
Query 1775 GTACCTCAGCGTTCTTACCCGCTAGA-GAAGTGCCCGCAAACTTCACTTACCGAGCTAA- 1832
| || | || ||||||||| ||| | |||||| ||||||||||||||||| ||
Sbjct 2792 GCACTTGTTCGATCTTACCCGGAAGACG-AGTGCCTTCAAACTTCACTTACCGA-AAAAC 2849
Query 1833 TGGGA-GTTTCATAATGGTAAATTTGAACCAAAGGCCTCTTTCTACGACCTT-GAGATTT 1890
| ||| ||| | | | || |||||||| ||||| ||||||||||| ||||| | | |||
Sbjct 2850 T-GGAGGTTCCGTGCTTGTCAATTTGAATCAAAGTCCTCTTTCTACAACCTTGGTG-TTT 2907
Query 1891 AAGGCTTGCGTCTTGCTGGATAAAAAAGTTGACAATGACAAGGAGTAGGCCGCCGCTAGG 1950
|||||||| |||||||||| ||| |||| ||| || || || || ||||| | || |
Sbjct 2908 AAGGCTTGTGTCTTGCTGGTTAATAAAGATGATAA-GA-AA-AAGGAGGCCAATGGTACG 2964
Query 1951 GAAACAAATGTGT-TTCTGAGCATCAGGGAGAAAGATAAAATT-GGCGTCGA-TGTTTCA 2007
| | || | || | | || | ||| ||| ||||| || || | |||| ||
Sbjct 2965 TCATTTCAGGTATATTAT-CGTATAATGGACAAA-CGCAAATTGGGTGT-TATTGTTCCA 3021
Query 2008 TGCAGACCTGCATATTGCTTTCTCGTGCCTCCCATTTTAAG-AGAGCATTTGCTCATCTT 2066
|| ||| ||||| | ||||| | |||||||| ||||| | ||||||||||| | |||
Sbjct 3022 TGGAGATCTGCACACGGCTTTGTTGTGCCTCCAATTTT-GGCGGAGCATTTGCTAACCTT 3080
Query 2067 TGAGTTTGAAGCTGATGTGACGTGCAACGAGCTTTTAttttttttCGGCA-TCCAGGGTA 2125
||| ||||||| ||||||| ||||||| |||| || ||| | | || | ||
Sbjct 3081 TGAACTTGAAGCGGATGTGAAAACCAACGAGTTTTTCTTCGAGTTC-GAAGTCAACCGTT 3139
Query 2126 ACGAAGCGGTGATAAAAGAATGTGGAGTACTCCAACTCTAA 2166
|||||| ||||||||||||||||||||||||||||||||||
Sbjct 3140 ACGAAGTGGTGATAAAAGAATGTGGAGTACTCCAACTCTAA 3180
> AT3G25510.1 | Symbols: | disease resistance protein (TIR-NBS-LRR
class), putative | chr3:9260838-9268797 REVERSE LENGTH=5946
Length=5946
Score = 893 bits (483), Expect = 0.0
Identities = 989/1222 (81%), Gaps = 80/1222 (7%)
Strand=Plus/Plus
Query 1 CATTTAGGAGTTGCACAAGATAGGTTGAACGACAAGAGGGTGCTTATTGTTCTTGATAGC 60
||||||||||||| | || |||||||||| ||||| | || ||||||||||| |||| |
Sbjct 4558 CATTTAGGAGTTGTAGAAAATAGGTTGAATGACAAAAAAGTACTTATTGTTCTAGATAAC 4617
Query 61 ATTGATCAATCAATACAACTAGATGCTATCGCAAAAGAAACTCGGTGGTTCGGTCATGGA 120
|| ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4618 ATCGATCAGTCAATGCAACTAGATGCTATCGCAAAAGAAACTCGGTGGTTCGGTCATGGA 4677
Query 121 AGTCGGATTATCATCACAACACAAGACCAACGGCTTTTGAAGGCACATGGCATCAACCAT 180
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 4678 AGTCGGATTATCATCACAACACAAGACCAAAAACTTTTGAAGGCACATGGCATCAACCAT 4737
Query 181 ATTTACAAGGTGGAGTT-TCCATCAGCATATGAAGCTTATCAGATGTTTTGTATGTATGC 239
|||||||||||||| || ||| ||| || ||||||||| || || |||||||||| |||
Sbjct 4738 ATTTACAAGGTGGA-TTATCCGTCAACACATGAAGCTTGCCAAATCTTTTGTATGTCTGC 4796
Query 240 TTTTGACCAAAACTTCCCTAAAGATG-GTTTCGAGGAGCTTGCAT-GGCAAGTTACAAAA 297
| ||| |||| ||||||||||||| ||||| || | ||||||| || |||| |||||
Sbjct 4797 TGTTGGTAAAAAGTTCCCTAAAGATGAGTTTCAAGAA-CTTGCATTGG-AAGTCACAAAT 4854
Query 298 CTTTTAGGTAATCTACCTTTGGGACTAAGAGTTATGGGATCCCACTTCCGAGGAATGTCT 357
||||||||||| ||||| |||||||||||||||||||| || || || || |||||||||
Sbjct 4855 CTTTTAGGTAACCTACCATTGGGACTAAGAGTTATGGGCTCTCATTTTCGGGGAATGTCT 4914
Query 358 AGGCATGAGTGGGTAAATGCATTACCAAGGTTAAAGATTCGCCTTGATGCTAGTATTCAA 417
| ||| |||||| |||||||| |||||||||||| || || ||||||| ||| |||||||
Sbjct 4915 AAGCAGGAGTGGATAAATGCACTACCAAGGTTAAGGACTCACCTTGATTCTAATATTCAA 4974
Query 418 AGCATTTTAAAGTTCAGTTACGATGCCTTATGT-GATGAAGATAAAGATTTATTCCTTCA 476
||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct 4975 AGCATTTTAAAGTTCAGTTACGATGCCTTATGTCG-TGAAGATAAAGATTTATTCCTTCA 5033
Query 477 TATAGCCTGC-CTTTTCAACAATGAC-GGAATG-G----TGAAAGATTATCTTGCTT-TA 528
||||| ||| |||| ||||||| | ||| || | || ||| ||||| | ||
Sbjct 5034 CATAGCATGCACTTT-CAACAATAAAAGGATTGAGAACGTGGAAGCGCATCTTACACATA 5092
Query 529 AGTTTCTTAGATGTGAGGCAAGGGCTTCACCTCTTAGCTGAGAAATCTCTCATAGC-ATT 587
|||| ||| ||| | ||| | ||||| | ||||| ||||||||||||||| | |||
Sbjct 5093 AGTT-CTTGGATACAAAACAACGATTTCACGTATTAGCAGAGAAATCTCTCATATCTATT 5151
Query 588 AGA-GATTTTTTCTGCTGACTATACACATATAAAGATGCACAATCTATTAGTGCAATTAG 646
|| || | || | | || || |||||| ||||| |||| | || |
Sbjct 5152 -GAAGAA-------G--GA-TGGA----TA-AA-GATGCATAATCTGTTAGAACTGTTGG 5194
Query 647 GTAGAGACATTGTCCGTCATAAGCCTGGGCACCAATCCATTTGTGCGCCTGGGAAGCGTC 706
||||||| ||||| ||||| ||| || | | |||||| | | ||||||||||||||
Sbjct 5195 GTAGAGAAATTGTATGTCATGAGCATG---A--A-TCCATTCGAGAGCCTGGGAAGCGTC 5248
Query 707 AATTTTTGGTTGATGCTAGAGATATTTGTGAAGTACTCACTGATAACACGGGTAGTAGAA 766
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||
Sbjct 5249 AATTTTTGGTTGATGCTAGAGATATTTGTGAAGTACTCACTGATGACACGGGTAGTA-AA 5307
Query 767 A-TGTTATAGGTATACT-TTTCGAGGT-ATAT-ACCCTATCAGGCGAATTAAATATCAGT 822
| |||| |||||||| | |||| | | | | | | ||| ||||||||||||||| |||
Sbjct 5308 AGTGTTGTAGGTATA-TATTTCAAT-TCAGCTGAGC-TATTAGGCGAATTAAATATAAGT 5364
Query 823 GAGAGAGCTTTTGAAGGAATGTCTAACCTCAAGTTCTTAAGATTCCATGGCCCATATGAC 882
|| |||||||| |||||||||||||| || || ||||||||| || | | | ||||
Sbjct 5365 GAAAGAGCTTTCGAAGGAATGTCTAATCTTAAATTCTTAAGAATCAA-G-----TGTGAC 5418
Query 883 -GGCCAAAGCGATAAATTGTACTTACCGCAAGGGTTGAA-TAATCTACCTCGGAAACTTA 940
|| | | |||||| |||||||||||| ||| || || || | || |||| |||||||
Sbjct 5419 CGG--A--GTGATAAAATGTACTTACCGCGAGGTTTAAAGTA-TATATCTCGAAAACTTA 5473
Query 941 GATTAATAGAATGG-AGCCGTTTCCCAATGAAATGTTTGCCTTCCAATTTTTGTACGAAG 999
||||| |||||||| | | |||| ||| ||| ||||||||||||||||||||||||| ||
Sbjct 5474 GATTACTAGAATGGGATC-GTTTTCCACTGACATGTTTGCCTTCCAATTTTTGTACGGAG 5532
Query 1000 TATCTAGTCCATA-TAGATATGTGGA-ACAGCAAACTTGAGAA-CTTGTGGCAAGGAAAT 1056
|| || ||| | | || | ||| | | |||||||||||| ||| || |||| ||||||||
Sbjct 5533 TACCTTGTCGA-ACTAAACATGCG-ACACAGCAAACTTGTGAAGCT-GTGGGAAGGAAAT 5589
Query 1057 CAGCCCCTTGGAAATCTCAAGAGGATGGATTTGCGTG-AGTCTAA-ACACCTAAAAGAGT 1114
| | | || ||||| |||||| ||||| ||||| | | || || | || |||| |||
Sbjct 5590 CTGTCGCTCGGAAACCTCAAGTGGATGAATTTGT-TCCATTCGAAGA-ACTTAAAGGAGC 5647
Query 1115 TACCTAATCTCTCAACTGCCACTAACCTTGAGAAC-TTGACTCTGTT-TGGATGCTCAAG 1172
||||| || |||||||||||||||||||| | ||| |||| ||| || ||||||||||||
Sbjct 5648 TACCTGATTTCTCAACTGCCACTAACCTTCA-AACATTGATTCT-TTGTGGATGCTCAAG 5705
Query 1173 TTTGGCGGAGCTCCCCTCCTCT 1194
||||| |||||| || | ||||
Sbjct 5706 TTTGGTGGAGCTGCCTTACTCT 5727
> AT1G65850.2 | Symbols: | Disease resistance protein (TIR-NBS-LRR
class) family | chr1:24494678-24498542 FORWARD LENGTH=3269
Length=3269
Score = 872 bits (472), Expect = 0.0
Identities = 984/1225 (80%), Gaps = 60/1225 (5%)
Strand=Plus/Plus
Query 5 TAGGAGTTGCACAAGATAGGTTGAACGACAAGAGGGTGCTTATTGTTCTTGATAGCATTG 64
||||||||| | ||||||| ||||| ||||||| ||| ||||||||||||||| || |
Sbjct 1012 TAGGAGTTGTAGAAGATAGATTGAAAGACAAGAAAGTGTTTATTGTTCTTGATAATATCG 1071
Query 65 ATCAATCAATACAACTAGATGCTATCGCAAAAGAAACTCGGTGGTTCGGTCATGGAAGTC 124
| || |||||||||||||||||||| |||||||||| ||| ||||| |||||||||||||
Sbjct 1072 ACCAGTCAATACAACTAGATGCTATTGCAAAAGAAAGTCGATGGTTTGGTCATGGAAGTC 1131
Query 125 GGATTATCATCACAACACAAGACC--AACGGCTTTTGAAGGCACATG--G-CATCAACCA 179
|||||||||||||||||||||||| || |||||||||||||||| | |||||||||
Sbjct 1132 GGATTATCATCACAACACAAGACCGGAAA--CTTTTGAAGGCACATGATGGCATCAACCA 1189
Query 180 TATTTACAAGGTGGAGTTTCCATCAGCATATGAAGCTTATCAGATGTTTTGTATGTATGC 239
||||||||| || | |||||||||||||||||||||| || || ||||||||||||||
Sbjct 1190 TATTTACAACGTAAATTTTCCATCAGCATATGAAGCTTGCCAAATATTTTGTATGTATGC 1249
Query 240 TTTTG-ACCAAAACTTCCCTAAAGATGGTTTCGAGGAGCTTGCATGGCAAGTTACAAAAC 298
||||| || |||| |||| ||||||||||||||| |||||||||||| ||||| ||||||
Sbjct 1250 TTTTGGACAAAAATTTCC-TAAAGATGGTTTCGAAGAGCTTGCATGGGAAGTTGCAAAAC 1308
Query 299 TTTTAGGTA-ATCTACCTTTGGGACTAAGAGTTATGGGATCCCACTTCCGAGGAATGTCT 357
|||||||| | ||||| ||||| ||||||||||||| || || || || |||||||||
Sbjct 1309 TTTTAGGTGGA-CTACCATTGGGTTTAAGAGTTATGGGCTCTCATTTTCGGGGAATGTCT 1367
Query 358 AGGCATGAGTGGGTAAATGCATTACCAAGGTTAAAGATTCGCCTTGATGCTAGTATTCAA 417
| ||||||||| ||||||| |||| ||||||| || |||||||||||| | |||||||
Sbjct 1368 AAACATGAGTGGATAAATGCCCTACCGAGGTTAAGGACTCGCCTTGATGCCAATATTCAA 1427
Query 418 AGCATTTTAAAGTTCAGTTACGATGCCTTATGTGATGAAGATAAAGATTTATTCCTTCAT 477
||||| |||||||| |||||| ||||||| ||||| ||||||||||| ||||| ||| ||
Sbjct 1428 AGCATCTTAAAGTTTAGTTACAATGCCTTGTGTGAAGAAGATAAAGACTTATTTCTTTAT 1487
Query 478 ATAGCCTGCCTTTTCAACAATGAC-GGAATG-----GTGAAAGATTATCTTGCTTT-AAG 530
||||| ||||||||||||||| | ||| || ||| |||| ||||||| |||
Sbjct 1488 ATAGCATGCCTTTTCAACAATAAAAGGATTGAAAAAGTGGAAGAGCATCTTGCAGAGAAG 1547
Query 531 TTTCTTAGATGTGAGGCAAGGGCTTCACCTCTTAGCTGAGAAATCTCTCATAGC-ATTAG 589
| || | |||||| |||||| |||||| | ||| |||| |||||||||||| | ||| |
Sbjct 1548 TCCCTGA-ATGTGAAGCAAGGACTTCACGTTTTAACTGAAAAATCTCTCATATCTATT-G 1605
Query 590 AGATTTTTTCTGCTGACTATACACATATAAAGATGCACAATCTATTAGTGCAATTAGGTA 649
| | | || | | | || || |||||| ||| | ||| ||||| ||||
Sbjct 1606 A-AGGG-----G--GA--AGA-A--TA-AA-GATGCATAATTTGCTAGAACAATTGGGTA 1650
Query 650 GAGACATTGTCCGTCATAAGC-CTGGGCACCAATCCATTTGTGCGCCTGGGAAGCGTCAA 708
||| ||||| |||||| || | ||||| ||| ||||| ||| |||||||| ||||||
Sbjct 1651 AAGAAATTGTTCGTCATGGGCTC-GGGCATCAACCCATTCGTGAACCTGGGAAACGTCAA 1709
Query 709 TTTTTGGTTGATGCTAGAGATATTTGTGAAGTACTCACTGATAACACGGGTAGTAGAAA- 767
|||||||||||| ||||||||||||||||| |||||||| || |||||||||||| |||
Sbjct 1710 TTTTTGGTTGATACTAGAGATATTTGTGAACTACTCACTAATGACACGGGTAGTA-AAAG 1768
Query 768 TGTTATAGGTATACTTTTCGAGGT-ATAT-ACCCTATCAGGCGAATTAAATATCAGTGAG 825
||||||||| |||| |||| | | || | | | ||| ||||||||||||| ||||||
Sbjct 1769 TGTTATAGGCATACATTTCTAC-TCATCCGAGC-TCTCAAGCGAATTAAATATAAGTGAG 1826
Query 826 AGAGCTTTTGAAGGAATGTCTAACCTCAAGTTCTTAAGATTCCA-TGGCC-CATATGACG 883
|||||||||||||||||| ||||||| || |||||||||||| | | || | |||| |
Sbjct 1827 AGAGCTTTTGAAGGAATGCCTAACCTTAAATTCTTAAGATTCTACTA-CCGC-TATGGTG 1884
Query 884 GCCAAAGCGATAAATTGTACTTACCGCAAGGGTTGAATAATCTACCTCGGAAACTTAGAT 943
| | || ||||||||||||||||| ||||| |||||| ||||| ||| ||||||| |
Sbjct 1885 ACGAGAGTGATAAATTGTACTTACCACAAGGTTTGAATTATCTATCTCAAAAACTTAAAA 1944
Query 944 TAATAGAATGG-AGCCGTTTCCCAATGAAATGTTTGCCTTCCAATTTTTGTACGAAGTAT 1002
|| |||||||| | | ||||| ||| |||| |||||||||||||||||||| ||||
Sbjct 1945 TACTAGAATGGGATCATTTTCCGT-TGACATGTATGCCTTCCAATTTTTGTACGGAGTAC 2003
Query 1003 CTAGTCCATA-TAGATATGTGGAACAGCAAACTTGAGAA-CTTGTGGCAAGGAAATCAGC 1060
|| || | | || | ||| || |||||||||| | || || |||| ||||||| | ||
Sbjct 2004 CTTGTTGA-ACTAAACATGCGGTTCAGCAAACTTCATAAGCT-GTGGGAAGGAAACCGGC 2061
Query 1061 CCCTTGGAAATCTCAAGAGGATGGATTTGCGTGAGTCTAAACA-CCTAAAAGAGTTACCT 1119
| |||| ||| || || ||||| ||||| | | || ||| | |||||| ||| |||||
Sbjct 2062 CGCTTGCAAACCTTAACTGGATGTATTTGAATCATTCGAAA-ATCCTAAAGGAGCTACCT 2120
Query 1120 AATCTCTCAACTGCCACTAACCTTGA-GAACT-TGACTCTGTTTGGATGCTCAAGTTTGG 1177
|||||||||| ||||| |||||| | ||||| | ||| ||| ||||||||||||||
Sbjct 2121 GATCTCTCAACAGCCACGAACCTTCAAGAACTATTTCTC-GTTAA-ATGCTCAAGTTTGG 2178
Query 1178 CGGAGCTCCCCTCCTCTCTTGGAAA 1202
||||||||| |||||| | |||||
Sbjct 2179 TGGAGCTCCCATCCTCTATCGGAAA 2203
> AT3G03855.1 | Symbols: | pseudogene of disease resistance protein
| chr3:986948-990738 FORWARD LENGTH=3791
Length=3791
Score = 313 bits (169), Expect = 6e-84
Identities = 402/511 (79%), Gaps = 29/511 (6%)
Strand=Plus/Plus
Query 1 CATTTAGGAGTTGCACAAGATAGGTTGAACGACAAGAGGGTGCTTATTGTTCTTGATAGC 60
|||||||| ||||||||||| ||| | || ||| ||| || ||| ||||||||||| ||
Sbjct 1085 CATTTAGGGGTTGCACAAGAAAGGCTCAAGGACGAGAAAGTTCTTGTTGTTCTTGATGGC 1144
Query 61 ATTGATCAATCAATACAACTAGATGCTATCGCAAAAGAAACTCGGTGGTTCGGTCATGGA 120
||||||| | | | ||| | || || || ||||||||||||||||||||||||||||||
Sbjct 1145 GTTGATCAGTTATTTCAATTGGAAGCCATGGCAAAAGAAACTCGGTGGTTCGGTCATGGA 1204
Query 121 AGTCGGATTATCATCACAACACAAGACC-AACGGCTTTTGAAGGCACATGGCATCAACCA 179
||||| |||||||| ||||||| ||| | || ||||||||||||||||| |||| |||
Sbjct 1205 AGTCGTATTATCATTACAACACCAGATCTAAAA-CTTTTGAAGGCACATGGGATCACCCA 1263
Query 180 TATTTACAAGGTGGAGTTTCCATCAGCATA-TGAAGCT-TATCAGATGTTTTGTATGTAT 237
||||| |||||||| |||||| || | | ||| ||| | | | || ||||||||||||
Sbjct 1264 CATTTATAAGGTGGATTTTCCACCACC-TGCTGAGGCTCT-TGAAATCTTTTGTATGTAT 1321
Query 238 GCTTTTGACCAAAACTTCCCTAAAGATGGTTTCGAGGA-GCTTGCATGGCAAGTTACAAA 296
||||| || ||||| | ||||||||| ||||||||| | |||||| ||| ||| |||||
Sbjct 1322 GCTTTCGAGCAAAAATCCCCTAAAGAGGGTTTCGAG-ATGCTTGCCTGGGAAGCTACAAT 1380
Query 297 ACTT--TTAGGT-AATCTACCTTTGGGACTAAGAGTTATGGGATCCCACTTCCGAGGAAT 353
||| || | | || || |||||||||||||| ||||| || || | || |||||||
Sbjct 1381 TCTTGCTT-G-TCAA-CTCCCTTTGGGACTAAGGGTTATAGGCTCTTATTTTCGAGGAAA 1437
Query 354 GT-CTAG--GCATGA-GTGGGTAA-ATGCATTACCA-AGGTTAAAGATTCGCCTTGATGC 407
|| || | | | || ||||| || | ||| ||||| || |||| || || |||||| |
Sbjct 1438 GTACTCGAAGAA-GATGTGGG-AAGAGGCACTACCAGAG-TTAAGGAGTCACCTTGACGG 1494
Query 408 TAGTA-TTCAAAGCATTTTAAAGTTCAGTTACGATGCCTTAT-GTGATGAA-GATAAAGA 464
|| | || ||| | |||||||||||| ||||||||||||| | || ||| ||||||
Sbjct 1495 -AGAAATTGAAACCGTTTTAAAGTTCAACTACGATGCCTTATCG-GA-GAAAGATAAATC 1551
Query 465 TTTATTCCTTCATATAGCCTGCCTTTTCAAC 495
|||||||||||| || | ||| ||||||||
Sbjct 1552 GTTATTCCTTCATCTAACTTGCTTTTTCAAC 1582
> AT1G57650.1 | Symbols: | ATP binding | chr1:21351291-21354311
FORWARD LENGTH=2130
Length=2130
Score = 159 bits (86), Expect = 8e-38
Identities = 214/273 (78%), Gaps = 20/273 (7%)
Strand=Plus/Plus
Query 234 GTATGCTTTTGACCAAAACTTCCCTAAAGATGGTTTCGAGGAGCTTGCAT-G-GCAAGTT 291
|||||||||| ||||||| |||| ||||||||||||| || || || | | | || ||
Sbjct 255 GTATGCTTTTAACCAAAAGACCCCTGAAGATGGTTTCGATGAACTAGC-TCGTG-AAATT 312
Query 292 ACAAAACTTTTAGGT-AATCTACCTTTGGGACT-AAGAGTTATGGGATCCCACTTCCGAG 349
||| | | | | ||| || || || || ||||| ||| ||||| ||||||||||| || |
Sbjct 313 ACATACCATGTCGGTGAA-CTTCCGTTAGGACTAAAG-GTTATTGGATCCCACTTTCGTG 370
Query 350 GAATGT-CTAGGCATG-AGTGGGTAAAT-GCATTACCAAGGTTAAAGATTCG--CCTTGA 404
|| ||| | ||| | | ||| || ||| | | || ||||||||| || || || | |
Sbjct 371 GATTGTCCAAGG-A-GCAGT-GGCCAATGGAAGTATCAAGGTTAAGGA--CGTACCGTAA 425
Query 405 TGCTAG-TATTCAAAGCATTTTAAAGTTCAGTTACGATGCCTTATGTGATGAAGATAAAG 463
|| || |||| | ||||||| ||||||||||| ||||| |||||||||||||||||||
Sbjct 426 TG-GAGATATTGAGCGCATTTTGAAGTTCAGTTATGATGCTTTATGTGATGAAGATAAAG 484
Query 464 ATTTATTCCTTCATATAGCCTGCCTTTTCAACA 496
||||||||||||||||||| ||| |||||||||
Sbjct 485 ATTTATTCCTTCATATAGCTTGCTTTTTCAACA 517
> AT4G36140.1 | Symbols: | disease resistance protein (TIR-NBS-LRR
class), putative | chr4:17098956-17104479 REVERSE LENGTH=4824
Length=4824
Score = 122 bits (66), Expect = 1e-26
Identities = 156/197 (79%), Gaps = 16/197 (8%)
Strand=Plus/Plus
Query 12 TGCACAAGATAGGTTGAACGACAAGAGGGTGCTTA-TTGTTCTTGATAGCAT-T-GATCA 68
|||||| || | |||||| ||||||| ||| || ||||||||||| | || | || |
Sbjct 1098 TGCACATGAAATGTTGAAAGACAAGAAAGTG-GTACTTGTTCTTGAT-G-ATGTGGA-C- 1152
Query 69 ATCA-A-TACAACTAGATG-CTATCGCAAAAGAAACTCGGTGGTTCGGTCATGGAAGTCG 125
| || | |||| |||||| || | ||||| ||| |||||||||| |||| |||||||||
Sbjct 1153 AGCATAGGACAATTAGATGCCT-TGGCAAACGAAGCTCGGTGGTTTGGTCCTGGAAGTCG 1211
Query 126 GATTATCATCACAACACAAGACCAACGGCTTTT-GAAGGCACATGGCATC-AACCATATT 183
||||||||||||||||||||| ||| | ||||| || || ||| || ||| || ||||
Sbjct 1212 GATTATCATCACAACACAAGATCAAAGACTTTTAGA-GGAACAAGGGATCCAAT-ATATA 1269
Query 184 TACAAGGTGGAGTTTCC 200
||||| ||||| |||||
Sbjct 1270 TACAACGTGGATTTTCC 1286
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 107429166300
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5