BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg497543 Length=461 Score E Sequences producing significant alignments: (Bits) Value AT5G63240.1 | Symbols: | Carbohydrate-binding X8 domain superf... 628 1e-179 > AT5G63240.1 | Symbols: | Carbohydrate-binding X8 domain superfamily protein | chr5:25358968-25359565 REVERSE LENGTH=598 Length=598 Score = 628 bits (340), Expect = 1e-179 Identities = 424/463 (92%), Gaps = 12/463 (3%) Strand=Plus/Plus Query 1 ATAATGGTCACAAAAAC-GATATCTCTACCATTGACGCTCTA-CTTCTTCCTCCTCGTAT 58 ||||||||||| ||||| ||| |||||| ||||||||||| | |||| |||||||||||| Sbjct 124 ATAATGGTCAC-AAAACTGATGTCTCTATCATTGACGCTC-ATCTTCGTCCTCCTCGTAT 181 Query 59 CCACCGTATCTGTGAACGCCACACTAAGAAACCTCTCGCGGGCGGCTGAAAACAAAGGAG 118 | |||||||| |||||| | |||| |||||||||||||| ||| |||||||||||||||| Sbjct 182 CTACCGTATCCGTGAACTCGACACCAAGAAACCTCTCGCAGGCTGCTGAAAACAAAGGAG 241 Query 119 TATGGTGCATAGCGAATGACAAAGGGACAGATAAGCAACTACAAGCGAATATAGATTGGG 178 |||||||||||||| |||||||| ||||||||||||||| ||||||||||||||||||| Sbjct 242 TATGGTGCATAGCGGGTGACAAAGCGACAGATAAGCAACTGCAAGCGAATATAGATTGGG 301 Query 179 TTTGCAGCGACGAAGGAGGATTCCGTGACTGTGGAGCGATCAATCCCGGTGGACCTTGCT 238 |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| Sbjct 302 TTTGCAGCGACGAAGGAGGATTCCGTGACTGTGGAGCGCTCAATTCCGGTGGACCTTGCT 361 Query 239 TTGAACCAAACACGGTAAGAGACCACGCGTCGTTCGCAATGAACTTGTATTACCAGAACC 298 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 362 TTGAACCAAACACGGTAAGAGATCACGCGTCGTTCGCAATGAACTTGTATTACCAGAACC 421 Query 299 TTGGTGCCACCAAGGCACAATGCAATTTCCATAATACTGGCATTGAAGTTTATACCGACC 358 ||||||||||||||| |||||||||||||||||| |||||||||||||||| |||||||| Sbjct 422 TTGGTGCCACCAAGGAACAATGCAATTTCCATAACACTGGCATTGAAGTTTCTACCGACC 481 Query 359 CAAGCCATGGCTCGTGTGTTTTCGTATCTTATTAGCATTTTAATTTCCGGTTAACATGTA 418 ||||||||||||||||| ||||||||||||||||| ||| ||||| ||| || | || Sbjct 482 CAAGCCATGGCTCGTGTATTTTCGTATCTTATTAGAATTCTAATT-CCGCTT----T-TA 535 Query 419 TGTGTGGGAACTTGTTTGGCCGAAACTCCAGTTAAATAAGTTG 461 |||| || |||||||| ||| ||||||||||||||||||||| Sbjct 536 TGTG-GG-AACTTGTTAAGCCTAAACTCCAGTTAAATAAGTTG 576 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 21967006313 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5