BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg887345 Length=762 Score E Sequences producing significant alignments: (Bits) Value AT2G47850.1 | Symbols: | Zinc finger C-x8-C-x5-C-x3-H type fam... 1116 0.0 > AT2G47850.1 | Symbols: | Zinc finger C-x8-C-x5-C-x3-H type family protein | chr2:19595673-19598581 FORWARD LENGTH=2149 Length=2149 Score = 1116 bits (604), Expect = 0.0 Identities = 705/748 (94%), Gaps = 30/748 (4%) Strand=Plus/Plus Query 1 TTTTACTTGAAAACTGGAACCTGTAAATTTGGGGCGTCATGCAAATTCCACCATCCAAAG 60 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 572 TTTTACTTGAAAACTGGAACTTGTAAATTTGGGGCGTCATGCAAATTCCACCATCCAAAG 631 Query 61 AATGCTGGTGGATCCATGACCCACGTTCCACTAAATATATATGGATACCCAGTACGAGAG 120 ||||| ||||||||||||| |||||||||||||||||||||||||||||| ||||||||| Sbjct 632 AATGCAGGTGGATCCATGAGCCACGTTCCACTAAATATATATGGATACCCTGTACGAGAG 691 Query 121 GGTGATAACGAATGCTCCTACTATTTGAAAACGGGGCAATGCAAATTTGGTATAACCTGT 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 692 GGTGATAACGAATGCTCCTACTATTTGAAAACGGGGCAATGCAAATTTGGTATAACCTGT 751 Query 181 AAATTTCATCATCCTCAGCCTGCTGGTACAACTGTCCCACCACCACCACCAGCATCTGCA 240 ||||||||||||||||||||||||||||| ||||| | ||||||||||||||||||||| Sbjct 752 AAATTTCATCATCCTCAGCCTGCTGGTACTACTGT--C-CCACCACCACCAGCATCTGCA 808 Query 241 CCTCAGTTTTATCCATCGGTGCAGTCACTTATGCCTGACCAGTATGGAGGTCCATCTTCT 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 809 CCTCAGTTTTATCCATCGGTGCAGTCACTTATGCCTGACCAGTATGGAGGTCCATCTTCT 868 Query 301 AGCTTGAGAGTTGCAAGAACTCTTCTTCCCGGTTCTTATATGCAAGGCGCCTATGGTCCA 360 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 869 AGCTTGAGAGTTGCAAGAACTCTTCTTCCTGGTTCTTATATGCAAGGCGCCTATGGTCCA 928 Query 361 ATGCTATTAACCCCCGGGGTCGTTCCTATTCCAGGCTGGAGTCCTTATTCGTCTCTTTCT 420 ||||||||||||||||||||||||||||||||||||||||||||||| ||| | | || Sbjct 929 ATGCTATTAACCCCCGGGGTCGTTCCTATTCCAGGCTGGAGTCCTTACTCGGCAC---CT 985 Query 421 GACTCACTTTTGCTTCAGGCACCTGTGAGCCCTGCTCTATCTCCTGGTGCGCAGCACGCT 480 | | | || | |||| | | || |||||||||||||||||||||| Sbjct 986 G--T-------G----AG-C-CCTG----C--T-CT--ATCTCCTGGTGCGCAGCACGCT 1021 Query 481 GTTGGGGCAACTTCTTTATATGGAGTTACACAGCTCTCTTCCACCACTCCTTCGCTTCCC 540 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 1022 GTTGGGGCAACTTCTTTATATGGAGTTACACAGCTCACTTCCACCACTCCTTCGCTTCCC 1081 Query 541 GGGGTTTATCCATCTCTGTCCTCTCCTACAGGTGTTATACAGAAAGAACAGGCCTTTCCA 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1082 GGGGTTTATCCATCTCTGTCCTCTCCTACAGGTGTTATACAGAAAGAACAGGCCTTTCCA 1141 Query 601 GAGAGACCTGGTGAACCAGAGTGCCAATACTATTTGAAAACAGGAGATTGTAAGTTTGGA 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1142 GAGAGACCTGGTGAACCAGAGTGCCAATACTATTTGAAAACAGGAGATTGTAAGTTTGGA 1201 Query 661 ACATCTTGTAAGTTTCATCATCCTCGAGATCGGGTTCCACCAAGAGCTAATTGCATCCTC 720 ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| Sbjct 1202 ACATCTTGTAAGTTTCATCATCCTCGAGATCGGGTTCCACCAAGAGCGAATTGCGTCCTC 1261 Query 721 AGCCCCATTGGCCTTCCTCTACGCCCGG 748 ||||||||||| |||||||||||||||| Sbjct 1262 AGCCCCATTGGTCTTCCTCTACGCCCGG 1289 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 37022566339 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5