BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg887411

Length=321
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT5G61540.1 | Symbols:  | N-terminal nucleophile aminohydrolase...   468    2e-131


> AT5G61540.1 | Symbols:  | N-terminal nucleophile aminohydrolases 
(Ntn hydrolases) superfamily protein | chr5:24744947-24747524 
FORWARD LENGTH=1394
Length=1394

 Score =  468 bits (253),  Expect = 2e-131
 Identities = 304/327 (93%), Gaps = 9/327 (3%)
 Strand=Plus/Plus

Query  1     GTTGGTGATGGGCTTATCGACACCG-TCTACCA--CTACGCTGATGATGAAGTCGGTGGA  57
             ||||||||||||| |||||   | | || | ||  |||||||||||||||||| ||||||
Sbjct  804   GTTGGTGATGGGCCTATCG--TCGGTTC-ATCAGCCTACGCTGATGATGAAGTAGGTGGA  860

Query  58    TGTGGTGCAACTGGAGATGGTGACACCATGATGCGCTTCCTCCC---TTACCAAGTTGTG  114
             ||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||
Sbjct  861   TGTGGTGCAACTGGAGATGGTGACACCATGATGCGCTTCCTCCCTTGTTACCAAGTTGTG  920

Query  115   GAGAGCATGAGACAAGGAATGAAACCAGAAGAAGCTGCTAAAGACGCAATCTCGAGAATC  174
             |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct  921   GAGAGCATGAGACAAGGAATGAAACCAGAAGAAGCTGCTAAAGATGCAATCTCGAGAATC  980

Query  175   GCAAGGAAGTTTCCAGATTTCGTGGGAGCCGTTGTGGCTGTTGACAAGAACGGGTCTCAC  234
             ||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct  981   GCAAGGAAGTTTCCAGATTTCGTGGGAGCAGTTGTGGCTGTTGACAAGAACGGATCTCAC  1040

Query  235   TCAGGAGCTTGCCATGGCTGGACGTTTCAGTACTCAGTCCAGAACCCTGACATGGACGAT  294
              ||||||||||| |||||||||||||||||||||||||||| |||||||||||| |||||
Sbjct  1041  GCAGGAGCTTGCTATGGCTGGACGTTTCAGTACTCAGTCCAAAACCCTGACATGAACGAT  1100

Query  295   GTTCAAGTCTTCACAGTGCTTCCATGA  321
             ||||||||||| ||||| |||||||||
Sbjct  1101  GTTCAAGTCTTTACAGTTCTTCCATGA  1127



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 14929521453


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5