BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg887422 Length=486 Score E Sequences producing significant alignments: (Bits) Value AT2G46760.1 | Symbols: | D-arabinono-1,4-lactone oxidase famil... 754 0.0 AT2G46740.1 | Symbols: | D-arabinono-1,4-lactone oxidase famil... 514 3e-145 > AT2G46760.1 | Symbols: | D-arabinono-1,4-lactone oxidase family protein | chr2:19213028-19215166 REVERSE LENGTH=1812 Length=1812 Score = 754 bits (408), Expect = 0.0 Identities = 460/486 (95%), Gaps = 0/486 (0%) Strand=Plus/Plus Query 1 ATGCGTTATGTCACATCTTCTCCGGCCTATCTCGGGAAAGAAACAGAAGCTTTAGACTTT 60 |||||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||| Sbjct 1327 ATGCGTTATGTCACATCTTCTCCGGCGTATCTCGGGAAAGAAACAGAGGCTTTGGACTTT 1386 Query 61 GACCTCACGTATTACCGAGCCAAAAATCCGTTAGCACCGCGACTATACGAAGATTTTATA 120 |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct 1387 GACCTCACGTATTACCGAGCCAAAGATCCGTTATCACCGCGACTATACGAAGATTTTATC 1446 Query 121 GAAGAAATCGAGCAAATTGCGTTGTTCAAGTACAACGCCTTGCCGCATTGGGGTAAGAAC 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 1447 GAAGAAATCGAGCAAATTGCGTTGTTCAAGTATAACGCCTTGCCGCATTGGGGTAAGAAC 1506 Query 181 AGAAATTTAGCGTTTGATGGAGTGATTAAAAAGTACAAGAACGTGCCGGCATTCTTCAAA 240 || || ||||||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct 1507 AGGAACTTAGCGTTTGATGGAGTGATTAAAAAGTACAAGAATGTGCCGGCATTCTTGAAA 1566 Query 241 GTTAAAGAAAGCTATGATCCAATGGGTTTATTCTCAAGTGAATGGACCAACCAGATCTTA 300 || ||||||||||||||||||||||||||||||||||| |||||||| | ||||||||| Sbjct 1567 GTAAAAGAAAGCTATGATCCAATGGGTTTATTCTCAAGCGAATGGACTGATCAGATCTTA 1626 Query 301 GGAATCAAAGGAAATGTGACGATAATAAAAGATGGATGTGCATTAGAGGGTTTGTGTATA 360 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || Sbjct 1627 GGAATCAAAGGAAATGTGACGATAATAAAAGATGGATGCGCATTAGAGGGTTTGTGCGTA 1686 Query 361 TGTTCGGAGGATGCACATTGTGCTCCGACCAAAGGATATTTGTGTCGACCAGGAAAAGTC 420 |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||| Sbjct 1687 TGTTCGGAGGATGCTCATTGTGCTCCGACCAAAGGATATTTTTGTCGACCAGGAAAAGTC 1746 Query 421 TACATAGAAGCTAGAGTATGTACACGTGTTGATGACATAAGTGTGATCCAATCATTAAGT 480 |||| ||||||||| ||||||||||||| |||||||||||||||||| |||||| ||||| Sbjct 1747 TACAAAGAAGCTAGGGTATGTACACGTGCTGATGACATAAGTGTGATTCAATCACTAAGT 1806 Query 481 TACTAA 486 |||||| Sbjct 1807 TACTAA 1812 > AT2G46740.1 | Symbols: | D-arabinono-1,4-lactone oxidase family protein | chr2:19205157-19207455 REVERSE LENGTH=1798 Length=1798 Score = 514 bits (278), Expect = 3e-145 Identities = 394/451 (87%), Gaps = 4/451 (1%) Strand=Plus/Plus Query 1 ATGCGTTATGTCACATCTTCTCCGGCCTATCTCGGGAAAGAAACAGAAGCTTTAGACTTT 60 ||||||||||||||||| |||||||| ||||| || |||||||| ||||| |||||||| Sbjct 1315 ATGCGTTATGTCACATCCTCTCCGGCTTATCTTGGAAAAGAAACGGAAGCCATAGACTTT 1374 Query 61 GACCTCACGTATTACCGAGCCAAAAATCCGTTAGCACCGCGACTATACGAAGATTTTATA 120 || | || |||||||||||||| |||||||| |||||||||| || ||||||||||| Sbjct 1375 GATATAACATATTACCGAGCCAATGATCCGTTAACACCGCGACTCTATGAAGATTTTATC 1434 Query 121 GAAGAAATCGAGCAAATTGCGTTGTTCAAGTACAACGCCTTGCCGCATTGGGGTAAGAAC 180 |||||||||||||||||||||||| ||||||| || || || || |||||||||||||| Sbjct 1435 GAAGAAATCGAGCAAATTGCGTTGCTCAAGTATAATGCATTACCACATTGGGGTAAGAAT 1494 Query 181 AGAAATTTAGCGTTTGATGGAGTGATTAAAAAGTACAAGAACG-TGCCGGCATTCTTCAA 239 ||||| ||||||||||||||||||||||||||||||||||| | | || |||||||| || Sbjct 1495 AGAAACTTAGCGTTTGATGGAGTGATTAAAAAGTACAAGAATGCT-CCAGCATTCTTGAA 1553 Query 240 AGTTAAAGAAAGCTATGATCC-AATGGGTTTATTCTCAAGTGAATGGACCAACCAGATCT 298 ||| ||||| || |||||||| ||||| ||||||||| || |||||||| | |||||| Sbjct 1554 AGTAAAAGAGAGTTATGATCCGAATGG-TTTATTCTCGAGCGAATGGACGGATCAGATCC 1612 Query 299 TAGGAATCAAAGGAAATGTGACGATAATAAAAGATGGATGTGCATTAGAGGGTTTGTGTA 358 |||| ||||||||||| ||||||| ||||||||||||||||||| ||||||||||||| Sbjct 1613 TAGGGATCAAAGGAAACCCGACGATAGTAAAAGATGGATGTGCATTGGAGGGTTTGTGTA 1672 Query 359 TATGTTCGGAGGATGCACATTGTGCTCCGACCAAAGGATATTTGTGTCGACCAGGAAAAG 418 ||||||| || ||||| |||||||||||| ||||||| |||||||||||||||||||||| Sbjct 1673 TATGTTCAGATGATGCTCATTGTGCTCCGTCCAAAGGCTATTTGTGTCGACCAGGAAAAG 1732 Query 419 TCTACATAGAAGCTAGAGTATGTACACGTGT 449 | |||| ||| |||||||| ||||||| ||| Sbjct 1733 TTTACAAAGAGGCTAGAGTCTGTACACATGT 1763 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 23157941767 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5