BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg887463

Length=432
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT2G39020.1 | Symbols:  | Acyl-CoA N-acyltransferases (NAT) sup...   516    8e-146


> AT2G39020.1 | Symbols:  | Acyl-CoA N-acyltransferases (NAT) superfamily 
protein | chr2:16295315-16296328 FORWARD LENGTH=1014
Length=1014

 Score =  516 bits (279),  Expect = 8e-146
 Identities = 299/309 (97%), Gaps = 0/309 (0%)
 Strand=Plus/Plus

Query  1    ATGTTAAACGACGTCGTTGTTGCTGGGTTTGTTCTGTTTTTCCCGAATTACTCGAGTTTT  60
            ||||| |||||||||||||| |||||||||||||||||||||||||||||||| || |||
Sbjct  468  ATGTTGAACGACGTCGTTGTAGCTGGGTTTGTTCTGTTTTTCCCGAATTACTCTAGCTTT  527

Query  61   TTGTCGAAGCCTGGGTTTTACATTGAGGATATATTTGTGAGAGAGCCTTATAGGAGGAAA  120
            ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct  528  TTGTCCAAGCCTGGTTTTTACATTGAGGATATATTTGTGAGAGAGCCTTATAGGAGGAAA  587

Query  121  GGGTTTGGTAGTATGTTGTTGACTGCTGTGGCGAAACAAGCGGTGAAGATGGGTTATGGA  180
            ||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct  588  GGGTTTGGTAGCATGTTGTTGACTGCTGTGGCCAAACAAGCGGTGAAGATGGGTTATGGA  647

Query  181  AGAGTGGAATGGGTTGTTCTTGATTGGAATGTGAATGCTATCAAGTTTTATGAGCAGATG  240
            |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct  648  AGAGTGGAATGGGTTGTTCTTGATTGGAATGTTAATGCTATCAAGTTTTATGAGCAGATG  707

Query  241  GGTGCTCAGATTTTGCAGGAGTGGAGAGTTTGTAGACTTACTGGTGATGCTCTTGAAGCT  300
            |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  708  GGTGCTCAGATTCTGCAGGAGTGGAGAGTTTGTAGACTTACTGGTGATGCTCTTGAAGCT  767

Query  301  TTTGATCAG  309
            |||||||||
Sbjct  768  TTTGATCAG  776



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 20509241592


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5