BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg887481

Length=507
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT5G42810.1 | Symbols: ATIPK1, IPK1 | inositol-pentakisphosphat...   737    0.0  


> AT5G42810.1 | Symbols: ATIPK1, IPK1 | inositol-pentakisphosphate 
2-kinase 1 | chr5:17166818-17169459 FORWARD LENGTH=1733
Length=1733

 Score =  737 bits (399),  Expect = 0.0
 Identities = 466/499 (93%), Gaps = 2/499 (0%)
 Strand=Plus/Plus

Query  1    ATGGTTTTGGAGGAGAAAGATGCATCTGATTGGATTTATAGAGGAGAAGGTGGTGCTAAT  60
            ||| |||||||||||||||||||||| ||||||||||| ||||| ||||||||||| |||
Sbjct  262  ATGATTTTGGAGGAGAAAGATGCATCAGATTGGATTTACAGAGGCGAAGGTGGTGCCAAT  321

Query  61   CTCGTTCTTGCTTACGCTGGATCTTCTCCGCTTTTTGTGGGGAAAGTGATTCGTATACAG  120
            ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||
Sbjct  322  CTCGTTCTTGCTTACGCTGGATCTTCTCCACTTTTTGTTGGGAAAGTGATTCGTATACAG  381

Query  121  AAGGCTCGGAGGAATGATAAAGCACAT-ATGACTGCGAATGGCGTTGTTTCGGTTTTAAC  179
            |||||||||||||||||||||||| || | || ||||||||| |||||||||||||||||
Sbjct  382  AAGGCTCGGAGGAATGATAAAGCA-ATCAAGAATGCGAATGGTGTTGTTTCGGTTTTAAC  440

Query  180  AAGCGATGAGCAACTTCTGTGGAGGGAAAACAAGGAGCTTATTTCATCACCGAACAAGGA  239
            |||||||||||||| ||| ||||| |||||||| ||||| ||||||||||| ||||||||
Sbjct  441  AAGCGATGAGCAACATCTATGGAGAGAAAACAATGAGCTGATTTCATCACCAAACAAGGA  500

Query  240  AGTTCTTGAACAGAGATATGTTAAGCATGTGATTATTCCACTCTTGGGTCCTAAACATGT  299
            |||||||||||| |||||||||||| ||||||| || |||||||||||||||||||||||
Sbjct  501  AGTTCTTGAACAAAGATATGTTAAGAATGTGATCATCCCACTCTTGGGTCCTAAACATGT  560

Query  300  TGATGCAGGAGTACGTGTTTCTGTGTCCAAGGAATTTCTTGAGTGTGTTGATAAGAAAGT  359
            |||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct  561  TGATGCTGGAGTACGTGTTTCTGTGTCCAAGGAGTTTCTTGAGTGTGTTGATAAGAAAGT  620

Query  360  TACTAAGCAGCGTCCGCTATGGCGTGTTAATGCAGCACATGTTGATACCAGTCATGATTC  419
             |||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||
Sbjct  621  AACTAAGCAGCGTCCGCTATGGCGTGTTAATGCAGCAAATGTTGATACGAGTCATGATTC  680

Query  420  TGCCCTTATTTTGAATGATCATTCACTTTTCTCTCATGGTATTTTTAGCATTGGTGATTG  479
            ||||||||| |||||||||||||||||||| ||||| ||||||| ||||  |||||||||
Sbjct  681  TGCCCTTATATTGAATGATCATTCACTTTTTTCTCAAGGTATTTCTAGCGGTGGTGATTG  740

Query  480  CATTAGTGTTGAAATAAAG  498
            |||||||||||||||||||
Sbjct  741  CATTAGTGTTGAAATAAAG  759



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 24212858854


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5