BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg887522 Length=453 Score E Sequences producing significant alignments: (Bits) Value AT2G39980.1 | Symbols: | HXXXD-type acyl-transferase family pr... 665 0.0 > AT2G39980.1 | Symbols: | HXXXD-type acyl-transferase family protein | chr2:16687673-16689956 REVERSE LENGTH=2284 Length=2284 Score = 665 bits (360), Expect = 0.0 Identities = 413/439 (94%), Gaps = 2/439 (0%) Strand=Plus/Plus Query 1 CAAAGCAACGATAAACTTAACGGAAAAGAAGACGGTATATTAACGGAAATGTTGGAGAGT 60 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct 855 CAAAGCAACGATAAACTTAACGGAAAAGAAAACGGTATTTTAACGGAAATGTTGGAGAGT 914 Query 61 TTGTTTGGAAGAAACGACGCCGTTTCGAAACCCGTTGTGGTTGAGATCTCGTCGTTCCAG 120 |||||||| |||||||||||||||||||||||||| | |||||||||||||||||| || Sbjct 915 TTGTTTGGGAGAAACGACGCCGTTTCGAAACCCGTCGCGGTTGAGATCTCGTCGTTTCAA 974 Query 121 TCTCTATGTGCGTTGCTTTGGCGTGCGATCACTCGTGCGAGGAAGCTTCCGAGTTCAAAA 180 |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct 975 TCTCTATGCGCGTTGCTTTGGCGTGCGATCACACGTGCGAGGAAGCTTCCGAGTTCGAAA 1034 Query 181 ACGACTACGTTTCGTATGGCTGTAAATTGTCGCCACCGGTTAAGTCCTAAGTTGAATCCG 240 ||||||||||||||||||||||| |||||||| ||||| || |||||||| |||||||| Sbjct 1035 ACGACTACGTTTCGTATGGCTGTGAATTGTCGTCACCGTTTGAGTCCTAAACTGAATCCG 1094 Query 241 GAGTATTTCGGAAACGCGATTCAGAGCGTTCCGACGTTTGCGACTGCGGGGGAGGTTTTG 300 ||||||||||||||||||||||| |||||||| |||||||||||||||| ||||||||| Sbjct 1095 GAGTATTTCGGAAACGCGATTCAAAGCGTTCCTACGTTTGCGACTGCGGCAGAGGTTTTG 1154 Query 301 TCTCGTGATCTTAAATGGTGCGCCGATCAGCTTAACCAGAGTGTTGCGGCTCATCAAGAC 360 || |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 1155 TCACGTGATCTTAAATGGTGCGCTGATCAGCTTAACCAGAGTGTTGCGGCTCATCAAGAC 1214 Query 361 GGGAGGATTCGTAGCGTTGTGGCGGATTGGGAAGCGAATCCTC-GGTGTTTTCCTCTTGG 419 ||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||| Sbjct 1215 GGGAGGATTCGTAGCGTTGTGGCGGATTGGGAAGCGAATCC-CAGGTGTTTTCCTCTTGG 1273 Query 420 AAATTCTGACGGAGCTTCG 438 |||| | |||||||||||| Sbjct 1274 AAATGCCGACGGAGCTTCG 1292 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 21564864321 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5