BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg887610

Length=366
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT2G36250.1 | Symbols: FTSZ2-1, ATFTSZ2-1 | Tubulin/FtsZ family...   113    1e-24


> AT2G36250.1 | Symbols: FTSZ2-1, ATFTSZ2-1 | Tubulin/FtsZ family 
protein | chr2:15197369-15200603 REVERSE LENGTH=1948
Length=1948

 Score =  113 bits (61),  Expect = 1e-24
 Identities = 73/79 (92%), Gaps = 0/79 (0%)
 Strand=Plus/Plus

Query  279   GTCTACTCCGGTAATGGAAGCATTTAATCTAGCTGATGATATACTTCATCGGGGGGTTAG  338
             ||||||||||||||  ||||||||||||||||||||||||||||| | || ||||||| |
Sbjct  1071  GTCTACTCCGGTAACAGAAGCATTTAATCTAGCTGATGATATACTCCGTCAGGGGGTTCG  1130

Query  339   TGGGATATCTGATATCATT  357
             |||||||||||||||||||
Sbjct  1131  TGGGATATCTGATATCATT  1149



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 17191570158


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5