BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg887637 Length=675 Score E Sequences producing significant alignments: (Bits) Value AT5G20390.1 | Symbols: | Glycosyl hydrolase superfamily protei... 438 3e-122 > AT5G20390.1 | Symbols: | Glycosyl hydrolase superfamily protein | chr5:6892831-6894195 REVERSE LENGTH=1270 Length=1270 Score = 438 bits (237), Expect = 3e-122 Identities = 340/389 (87%), Gaps = 9/389 (2%) Strand=Plus/Plus Query 4 ACCAATATTCGGATCTTTGATATGAA-TATGGATGTCCTTAACACCTTCCGAGGTAA-C- 60 ||||||||||||||||| || | || || ||||||||||||| |||| ||||| || | Sbjct 262 ACCAATATTCGGATCTTCGACA-CAACTACGGATGTCCTTAACGCCTTTCGAGGGAATCG 320 Query 61 CATGATATTGGAATTATGGTAGGTGTGAAGAACCAAGACTTAGAGGCTCTTTTGGCCAAC 120 || |||| ||| ||||||||| |||||||||||||||||||||||||||| || || | Sbjct 321 CA--ATATCGGAGTTATGGTAGACGTGAAGAACCAAGACTTAGAGGCTCTTTCGGTCAGC 378 Query 121 GAAGACGCTGTTAACACATGGTTCGTGACCAACATTGAGCCTTACTTATCTGATGTCAAC 180 ||||| ||||||||||| |||||||||||||||||||||||||||||| ||||||||||| Sbjct 379 GAAGAAGCTGTTAACACCTGGTTCGTGACCAACATTGAGCCTTACTTAGCTGATGTCAAC 438 Query 181 ATCACGTTCATTACTGTTGAGAATGAAATCATCCCCGGAGAAATCGGCTCTTACGTGCTA 240 |||||||||||| |||| | ||| ||| ||||||| || |||||||||||||| |||||| Sbjct 439 ATCACGTTCATTGCTGTCGGGAACGAAGTCATCCCAGGGGAAATCGGCTCTTATGTGCTA 498 Query 241 CCCGTCATGCACTCTCTCACCAACGTTGTCAAGTCGAGGATTCTCCCAATCTTGATTAGT 300 ||||||||| | |||||||||||| ||||||||||||||| |||||| |||||||| || Sbjct 499 CCCGTCATGAAATCTCTCACCAACATTGTCAAGTCGAGGAGTCTCCCGATCTTGATCAGC 558 Query 301 ACCACGGTGGAAAATGACCAACCTTGGCCAGTCGTATCCACCTTCTGCCGGAGATTTCAC 360 |||||||||| | ||||||||||||||||||| ||||||||||| ||||||||||||| Sbjct 559 ACCACGGTGGCTA-TGACCAACCTTGGCCAGTCATATCCACCTTCGGCCGGAGATTTCA- 616 Query 361 TCCC-CAAGCCCGAGAACAACTTATCCCG 388 | || ||||| || |||||||||| |||| Sbjct 617 TGCCTCAAGCACGTGAACAACTTACCCCG 645 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 32652195550 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5