BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg887642
Length=3273
Score E
Sequences producing significant alignments: (Bits) Value
AT5G11250.1 | Symbols: | Disease resistance protein (TIR-NBS-L... 1205 0.0
AT5G38340.1 | Symbols: | Disease resistance protein (TIR-NBS-L... 523 4e-147
AT3G25510.1 | Symbols: | disease resistance protein (TIR-NBS-L... 497 2e-139
AT3G44630.3 | Symbols: | Disease resistance protein (TIR-NBS-L... 422 1e-116
AT3G44480.1 | Symbols: RPP1, cog1 | Disease resistance protein ... 390 4e-107
AT3G44400.1 | Symbols: | Disease resistance protein (TIR-NBS-L... 237 5e-61
AT3G03855.1 | Symbols: | pseudogene of disease resistance prot... 222 1e-56
> AT5G11250.1 | Symbols: | Disease resistance protein (TIR-NBS-LRR
class) | chr5:3587978-3591960 REVERSE LENGTH=3570
Length=3570
Score = 1205 bits (652), Expect = 0.0
Identities = 1085/1289 (84%), Gaps = 49/1289 (4%)
Strand=Plus/Plus
Query 11 CTTCTTC-TTTTATCCTTACCACTGTTGCTGCTGCAATAGGCTTCTTCACGCTTCTT-AG 68
||||||| |||| |||||||||||||||| |||||||||||||||||||| ||| || ||
Sbjct 5 CTTCTTCGTTTT-TCCTTACCACTGTTGCAGCTGCAATAGGCTTCTTCACCCTT-TTGAG 62
Query 69 AAATCTCAGATGCCATCAAGAAGATGACAAAGAAAATAA-T--TCTTCTTCT-TCTACTT 124
||| ||||||| ||||| | ||| |||||||||| || | |||||| | ||| |||
Sbjct 63 AAAACTCAGATTCCATC---ATGATAACAAAGAAAAGAAGTCAACTTCTT-TATCTCCTT 118
Query 125 CATCACCTCCGTCTTCTTCATCGT-CTT--T--GTCTCCTCCATCGTCTTTGGATCGCAT 179
||||| |||| ||||||| || | ||| | || ||||||| | |||| | | ||||
Sbjct 119 CATCATCTCCATCTTCTTTGTC-TCCTTCATCAGT-TCCTCCACCTTCTTCGTCTTGCAT 176
Query 180 CTGGACACACCATGTGTTTCCAAGTTTTC-GAGGGGAATATGTCCGTAGAGACTTTCTTA 238
|||||||||||| || ||||| || ||| | |||||| ||||||||||||||||||| |
Sbjct 177 CTGGACACACCAAGTCTTTCCCAG-CTTCAGCGGGGAAGATGTCCGTAGAGACTTTCTCA 235
Query 239 GTCACATTCAGATGGAGTTTCAAAGAATGGGAATCACACCATTCATTGATAATGAGATCG 298
||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||
Sbjct 236 GTCACATTCAGATGGAGTTTCAAAGAATGGGAATCACTCCATTCGTTGATAATGAGATTA 295
Query 299 AGAGAGGACAATCCATCGGTCCCGAACT-CATTCGAGCAATTAGAGAATCCAAGATCGCA 357
| |||||| ||||||||||||| || || | | || || ||||||| || ||||| |||
Sbjct 296 AAAGAGGAGAATCCATCGGTCCTGAGCTTC-TGCGGGCTATTAGAGGGTCTAAGATAGCA 354
Query 358 ATTATCTTGCTCTCAAGAAACTACGCTTCTTCGAGCTGGTGTCTTGACGAATTGGCGGAG 417
|||||||||||||| || ||||| |||||||| | ||||||||||||||| ||| ||||
Sbjct 355 ATTATCTTGCTCTCTAGGAACTATGCTTCTTCAAAATGGTGTCTTGACGAACTGGTGGAG 414
Query 418 ATTATGAAGTGCAGGGACGAAT-TGGGTCAAACAGTTTTGGCTGT-TTTCTATAAAGTGG 475
|||||||| ||||| || || | ||| |||||| || |||| | ||| || |||||||
Sbjct 415 ATTATGAAATGCAGAGAAGAGTATGG-TCAAACTGTGATGGCCATATTT-TACAAAGTGG 472
Query 476 ATCCATCTGATGTAAAGAAGCTGACCGGAGATTTTGGAAAAGTCTTCaaaaaaaCATGTG 535
|||| ||||||||||| || |||||||||||||| || |||||||| | |||||| ||||
Sbjct 473 ATCCTTCTGATGTAAAAAATCTGACCGGAGATTTCGGGAAAGTCTTTAGAAAAACTTGTG 532
Query 536 CCGGTAAAACAAAAGA-GCACGTTGGGAGATGGAGACAAGCTTTGGCAAATGTCGCCACA 594
|||||||| |||| || | || ||||||||||||||||||||| || ||| || ||||||
Sbjct 533 CCGGTAAACCAAA-GAAGGACATTGGGAGATGGAGACAAGCTTGGGAAAAAGTGGCCACA 591
Query 595 ATCGCCGGTTACCATTCGACCAACTGGGATAATGAAGCGGCCATGATTaaaaaaaTCGCT 654
| || ||||||||||| | ||||||||||||||||||||||||||| || ||||||||
Sbjct 592 GTAGCTGGTTACCATTCAATCAACTGGGATAATGAAGCGGCCATGATCAAGAAAATCGCC 651
Query 655 ACTGATATTTCGAACTTGTTGAATAATTCTTCATCAT-CAAGTGATTTCGATGGGTTGGT 713
||||||||||||||| | |||| |||||| | || | || |||||||||| ||||| ||
Sbjct 652 ACTGATATTTCGAACATATTGATTAATTCCAC-TCCTTCACGTGATTTCGACGGGTTAGT 710
Query 714 TGGAATGAGAGAACATTTAGAGAAGATGGAACCGTTATTATGTTTAGACTCAGATGAAGT 773
||| ||||||| |||||||| |||||| ||||||| ||||| ||||| |||| |||||
Sbjct 711 TGGGATGAGAGCTCATTTAGAAAAGATGAAACCGTTGTTATGCCTAGACACAGACGAAGT 770
Query 774 GAGGATGATTGGGATTTGGGGTCCTTCTGGGATTGGGAAGACGACCATCGCCAGAGTTAT 833
||||| |||||||||||||||||| |||||||||||||||| || || ||||||||| |
Sbjct 771 AAGGATAATTGGGATTTGGGGTCCTCCTGGGATTGGGAAGACCACAATTGCCAGAGTTGT 830
Query 834 ATACAACAAACTCTCCGGCAGTTTTCAACTGAGTGTCTTTATGGA-ATCTATCGAAGCAA 892
||||||| |||||||| |||||| |||||||||||||||||||| | |||| ||||||
Sbjct 831 ATACAACCAACTCTCCCACAGTTTCCAACTGAGTGTCTTTATGGAGAA-TATCAAAGCAA 889
Query 893 AATATACAAGACCA--TGT-TCCGATGACTATAGTGCCAAGTTGCAGTTACAACAGCA-G 948
| ||||| |||||| || ||||||||||| ||||| |||||||| |||||||| | |
Sbjct 890 ACTATACCAGACCAACTGGCTCCGATGACTACAGTGCAAAGTTGCAATTACAACAA-ATG 948
Query 949 TTTATGTCTCAAATAACCAACCAGA-GTGATAT-GAAGATTTCTCATTTAGGTGTTGTTC 1006
|||||||||||||||||||| || | | ||||| || |||| |||||||||| |||| |
Sbjct 949 TTTATGTCTCAAATAACCAAGCAAAAG-GATATAGA-GATTCCTCATTTAGGAGTTGCCC 1006
Query 1007 AAGATAGGCTAAAAGACAAGAAAGTTCTTGTTGTTCTTGATGGTGTGGACAAGTCAATGC 1066
|||||||| | ||||||||||||||||| || ||||||||||| ||| || ||||| | |
Sbjct 1007 AAGATAGGTTGAAAGACAAGAAAGTTCTGGTCGTTCTTGATGGGGTGAACCAGTCAGTAC 1066
Query 1067 AACTAGATGCCATGGTGAAAGAAACTTGGTGGTTTGGTCCTGGGAGTCGGATTATTATTA 1126
|||||||||| |||| ||||||| ||||||||||||||||||||||||| || || ||||
Sbjct 1067 AACTAGATGCGATGGCGAAAGAAGCTTGGTGGTTTGGTCCTGGGAGTCGAATCATCATTA 1126
Query 1127 CAACGCAAGATC-GAAAGCTTTTCAG-GTCACATGGGATTAACCATATTTACAAGATTGA 1184
|||| ||||||| |||| ||||| || | |||||||||||||||||||||||||| | ||
Sbjct 1127 CAACACAAGATCAGAAA-CTTTTTAGAG-CACATGGGATTAACCATATTTACAAGGTGGA 1184
Query 1185 TTTTCCATCAACTGAAGAGGCCCTTCAAATCTTGTGCACATATGCTTTTGGTCAAAACTC 1244
||||||| ||||||||||||| ||||||||||| |||| ||||||||||||||||| ||
Sbjct 1185 TTTTCCACCAACTGAAGAGGCTCTTCAAATCTTCTGCATGTATGCTTTTGGTCAAAATTC 1244
Query 1245 CCCTAATG-TCGTTTTGAAGAAC-TTGCT 1271
|||||| | | ||||| | |||| |||||
Sbjct 1245 CCCTAAAGATGGTTTTCA-GAACCTTGCT 1272
Score = 606 bits (328), Expect = 3e-172
Identities = 881/1135 (78%), Gaps = 89/1135 (8%)
Strand=Plus/Plus
Query 1969 CTCCCTTCCTCTATTGGAAAT-CTCATCAATCT-AAAAGAATTGGATCTTAGCAGTTTAT 2026
||||| ||||| ||||| ||| | ||| ||||| ||| || |||||||| |||| |
Sbjct 2428 CTCCCATCCTCCATTGGGAATGC-CATTAATCTCCAAA-AACTGGATCTTCGCAGATGCG 2485
Query 2027 C-ATGTCTAGTGGAGCTCCCTTCCTCTATTGGGAAT-CTCATCAATCT-AAAAGAATTGG 2083
| | | ||| | |||||||| || |||||||||||| | ||| ||||| ||| | ||
Sbjct 2486 CAAAG-CTATTAGAGCTCCCGTCTTCTATTGGGAATGC-CATTAATCTCCAAA-ACCTGC 2542
Query 2084 ATCTTAGCA-G-TTTATCATGTCTAG-TGGAGCTCCCTTTC-TCGATTGGAAATGCCACC 2139
|||| | | | || ||| |||| | |||||||||| || || ||||| ||||||||
Sbjct 2543 TTCTT-G-ACGATTGCTCAAGTCT-GTTGGAGCTCCC-CTCGTCTATTGGGAATGCCACT 2598
Query 2140 AACCTTGAG-GT-TTTAAACCTTCGCCAA-TGCTCAAGTCTGGTAAAGC-TCCCCTTTTC 2195
|| || || || | |||||| | || ||||||| |||||| ||| ||| | ||||
Sbjct 2599 AA--TTTAGTGTACATGAACCTTAG-TAATTGCTCAAATCTGGTGGAGCTTCCTC-TTTC 2654
Query 2196 TATTGGAAACCTTCAGAAGTTGCA--AACTTTGACCTTACGAGGATGCTCTAAGCTAGAA 2253
||| |||||||||||||||||||| || |||| ||| ||||||||||||||||||
Sbjct 2655 TATAGGAAACCTTCAGAAGTTGCAGGAA--TTGATTTTAAAAGGATGCTCTAAGCTAGAG 2712
Query 2254 GATCTT-CCAGCCAACATCAAATTGGGATCTCTCGG-CGA-ACTTGAT-CTCACTGATTG 2309
|||||| ||| ||||||||| |||| |||| | || | | ||||| | |||| ||||||
Sbjct 2713 GATCTTCCCA-TCAACATCAACTTGGAATCT-TTGGAC-ATACTTG-TGCTCAATGATTG 2768
Query 2310 CTTGC-TGTTGAAAAGGTTTCCTGAGATCTCCACAAACGTTGA-ATTTCTC-AGGCTC-G 2365
| | | ||||||||||||||||||||||||| || |||||| | | |||| | ||| |
Sbjct 2769 C-TCCATGTTGAAAAGGTTTCCTGAGATCTCTACTAACGTT-AGAGCTCTCTA-TCTCTG 2825
Query 2366 ATGGAACTGCAATAGAAGAAGTCCCT-TCATCAATCAAATCATGGTCTCGTCTCAATGAG 2424
|||||| |||||||||||||| ||| || || |||| |||||| | ||||| ||||
Sbjct 2826 -TGGAACCGCAATAGAAGAAGTGCCTCTC-TCGATCAGGTCATGGCCCCGTCTTGATGA- 2882
Query 2425 GTGGAT-ATGTCATACAGTGAAAATCTCA--AGAACTTTCCTCATGCTT-TTGACATCAT 2480
| | | ||||||||| ||| ||||| | ||| || ||||||| || ||||||||||
Sbjct 2883 ATTGCTGATGTCATACTTTGATAATCT-AGTGGAA-TTCCCTCATG-TTCTTGACATCAT 2939
Query 2481 CACAGAGCTGCACATGACCAATACAGAAATACAAGAGTTTCCCCCA-TGGGTCAAGA-AA 2538
|||| | ||| || ||| | || ||||||||||||| |||| ||| | | |||||| ||
Sbjct 2940 CACAAATCTGGACTTGAGCGGTAAAGAAATACAAGAGGTTCCTCCACT-GATCAAGAGAA 2998
Query 2539 TTCTCTCGT-TTAACAG-TACTCATACTCAAGGGATGCAAAAAGCTGGTATCACTCCCAC 2596
| |||||| || ||| ||||||||||||||| | || |||| |||||||||||||||
Sbjct 2999 -TATCTCGTCTT--CAGACACTCATACTCAAGGGGTACAGAAAGGTGGTATCACTCCCAC 3055
Query 2597 AGATTCCAGATTCCATCACTTACATAT-ATGCCGAAGATTGTGAGTCCCTGGAGAGACTA 2655
||||||||||||| | | | || | |||| ||||||||||||||| |||||||||||
Sbjct 3056 AGATTCCAGATTCTTTAAAATGGAT-TGATGCTGAAGATTGTGAGTCCTTGGAGAGACTA 3114
Query 2656 GATTGCTCCTTTCACAATCCAAATATTTGC-CTCAAATTTGCTAAGTGCTTCAAACTGAA 2714
||||||||||||||||||||| | ||| | ||| |||| ||||||||| ||||| ||
Sbjct 3115 GATTGCTCCTTTCACAATCCAGAGATTA-CTCTCTTCTTTGGTAAGTGCTTTAAACTTAA 3173
Query 2715 TCAAGAAGCCAGAGACCTCATCATCCAGACACCAACTAGTAATTATGCGGTCTTACCCGG 2774
||||||||| |||||||| |||||||||||||| |||| || | || |||||||| ||
Sbjct 3174 TCAAGAAGCAAGAGACCTAATCATCCAGACACCGACTA--AACAA-GCAGTCTTACCTGG 3230
Query 2775 CAGAGAAGTGCCTGCATACTTCACTCACCAATCTACTACTGGAGGTTCCTTGACAATCAA 2834
||||| |||||||||||||||||||||| | | | | || ||||| |||||||| ||
Sbjct 3231 TAGAGAGGTGCCTGCATACTTCACTCACCGAGCGAGTG--GG-GGTTCATTGACAATTAA 3287
Query 2835 GCTGAACGAGAAGCCTCTTCCTACATCCATGCGGTTTAAGGCTTGCATTTTGCTGGTTCA 2894
| |||| |||| ||||||||||||||| ||| | | |||||||||||| ||||| ||||
Sbjct 3288 GTTGAATGAGAGGCCTCTTCCTACATCTATGAGATATAAGGCTTGCATCTTGCTAGTTCG 3347
Query 2895 TAAAGGTGACAATGAG-GCTCGTGAT-GATAAAAACTGGATGGATGAAAATGTCTACATT 2952
|| |||||| ||| | |||| |||| || | ||| ||| | ||| | | | | |
Sbjct 3348 TATTGGTGACTATG-GCGCTCATGATAGAGACAAA-TGGTTACATGTTGCT-T-T-CGGT 3402
Query 2953 GTTAGTTGTAACGAA-AGTACG-CATTATT-TATATCCAGTTTTAGCAGAGCATGTGTAC 3009
||||| | || | || | | | || ||| ||||| ||| ||| |||||||| |||||
Sbjct 3403 GTTAGGTCTA-C-AACATTGGGGCAC-ATTATATATTCAGGCTTAACAGAGCATCTGTAC 3459
Query 3010 GTATTTGAAGTCGAAGCAGATG-TGACTTCCAGCGAGCTTGTCTTTGAGTTCAAG 3063
||| ||| |||||| ||| | ||||||||||||||||||||||||||||||||
Sbjct 3460 ACATTCGAAATCGAAG-AGAAGGTGACTTCCAGCGAGCTTGTCTTTGAGTTCAAG 3513
Score = 396 bits (214), Expect = 8e-109
Identities = 549/703 (78%), Gaps = 53/703 (8%)
Strand=Plus/Plus
Query 1297 GAGTGGATGAAAG-CACTACCAAGGTTAAG-GAATAGCCTTGATGCTAATATTCTTAGCA 1354
||||||| |||| || ||||||| || || || ||||||||| ||| |||||| ||||
Sbjct 1354 GAGTGGA-AAAAGTCATTACCAAGATT-AGAGAGTAGCCTTGACGCTGATATTCAAAGCA 1411
Query 1355 TTTTGAAGTTCAGCTATGATGCCTTAGATGATGAAGACAAATATTTGTTTCTTCATATAG 1414
||||||||||||||||||| || |||||||| ||||| ||| |||| |||||||||||||
Sbjct 1412 TTTTGAAGTTCAGCTATGACGCTTTAGATGACGAAGATAAAAATTTATTTCTTCATATAG 1471
Query 1415 CATGCTTCTTCAATC-ATGAAGAGATTGAGAAAGTGGAAGATTATCTCGCAGAGACGTTC 1473
|||| || ||||| | | |||||||| ||| | ||||||| |||| ||| ||| |||
Sbjct 1472 CATGTTTTTTCAA-CGGTAAAGAGATTAAGATATTGGAAGAGCATCTTGCAAAGAAGTT- 1529
Query 1474 T-TGGATGTGAGTCATCGGCTTGATGTCTTAGCTGAGAAATCTCTCATATCTTT--G-AA 1529
| |||| || || || | ||| | ||||||||||||||||||||||||||||| | ||
Sbjct 1530 TGTGGAAGTCAGGCAAAGACTTAACGTCTTAGCTGAGAAATCTCTCATATCTTTTAGCAA 1589
Query 1530 TAGGGGATA-TATAAACATGCATGATTTGCTAGTCAAA-CTAGGTAGAGATATTGTCCGT 1587
| ||||| | |||| | |||||| | |||||| |||| |||||| |||| ||||| |||
Sbjct 1590 TTGGGGA-ACTATAGAGATGCATAAACTGCTAG-CAAAACTAGGTGGAGAAATTGTTCGT 1647
Query 1588 AAACAGTCTATTCGTGAGCCTGGACAACGCCTA-TTTTTGGTTGATGCACGA-GAAATTT 1645
|| || ||||| | ||||||||||||||||| | |||||| |||||| | || || || |
Sbjct 1648 AACCAATCTATCCATGAGCCTGGACAACGCC-AGTTTTTGTTTGATGGA-GAAGAGATAT 1705
Query 1646 GTGAAGTACTCAATCTTGATGC-GAACGGTAGTAGAAGTCTTATGGGCATAAATTTCAAC 1704
|||| || || ||| |||||| | | ||||||| |||| | || |||||| ||||| ||
Sbjct 1706 GTGATGTGCTGAATGGTGATGCAGCA-GGTAGTAAAAGTGTAATAGGCATAGATTTCCAC 1764
Query 1705 TTTGGTGAGGATAGGATCAAGGAA-AAGTTAC-ATAT-AAGTGAGAGAGCCTTTCAAGGA 1761
| | ||| ||| ||||| || || | |||| || |||||||| ||| |||||
Sbjct 1765 T------AC-ATA--ATCGAGGAAGAA-TT-CGATATGAA-TGAGAGAGTTTTTGAAGGA 1812
Query 1762 ATGTCTAATCTCCAATTCTTAAGAGTCAAAGG-GA--AT-A-ACAATACAATACATCTAC 1816
||||||||||| || ||||||||| || | | || || | ||| | |||| ||| |
Sbjct 1813 ATGTCTAATCTTCAGTTCTTAAGATTCGATTGTGACCATGATACATTGCAATT-ATC--C 1869
Query 1817 CGCACGGTTTAGAG-TATATATCTCGTAAACTTC-GATTACTACACTGGACT-TATTTTC 1873
||| ||| | ||| ||| | ||||||||||||| | |||||| | |||| | |||||||
Sbjct 1870 CGC--GGTCT-GAGCTATCTTTCTCGTAAACTTCAG-TTACTAGATTGGA-TATATTTTC 1924
Query 1874 CGATGACATGTTTGCCTCCTATTTTCAACACGGAGTTTCTGGTTGAACTAGACATGTCTT 1933
||||||||||||||||| ||| | | ||| |||||| || |||||||| || || |
Sbjct 1925 CGATGACATGTTTGCCTTCTACTGTGAACGTGGAGTTCCTTATTGAACTAAACCTGACGC 1984
Query 1934 ACAGCAAACTTGAGAAGTTGTGGGAAGGAATTAAACTCCCTTC 1976
||||||| ||||| | ||||||||||||| |||||| | ||||
Sbjct 1985 ACAGCAAGCTTGATATGTTGTGGGAAGGAGTTAAAC-CGCTTC 2026
> AT5G38340.1 | Symbols: | Disease resistance protein (TIR-NBS-LRR
class) family | chr5:15320507-15324061 FORWARD LENGTH=3180
Length=3180
Score = 523 bits (283), Expect = 4e-147
Identities = 858/1129 (76%), Gaps = 65/1129 (6%)
Strand=Plus/Plus
Query 191 ATGTGTTTCCAAGTTTTCGA-GGGGAATATGTCCGTAGAGA-CTTTCTTAGTCACATTC- 247
|||| ||||| || |||| | || | | |||| || | | | ||||||| |||||| |
Sbjct 173 ATGTCTTTCCGAG-TTTCCACGGAGCAGATGTTCGCA-AAACCTTTCTTTCTCACATGCT 230
Query 248 AGATGGAGTTTCAAA-GAATGGGAATCACACCATTCATTGATAATGAGATCGAGAGAGGA 306
| | ||| |||||| ||| ||||||| ||||||||||||||||| ||| || ||||
Sbjct 231 A-AAAGAG-TTCAAACGAAAGGGAATCGTTCCATTCATTGATAATGATATC--GACAGGA 286
Query 307 -CAA-TCCATCGGTCCCGAACTCATTCG-AGCAATTAGAGAATCCAAGATCGCAATTATC 363
||| || || ||||| || ||| || ||| || |||| ||| ||||||||||| ||
Sbjct 287 GCAAGTCTATTGGTCCTGAGCTC-GACGAAGCTATCAGAGGATCAAAGATCGCAATCGTC 345
Query 364 TTGCTCTC-AAGAAACTACGCTTCTTCGAGC-TGGTGTCTTGACGAATTGGCGGAGATTA 421
||||||| ||| ||||| |||||||| | | ||||| || |||| |||| |||||| |
Sbjct 346 ATGCTCTCAAAG-AACTATGCTTCTTC-ATCATGGTGCCTAAACGAGTTGGTGGAGATCA 403
Query 422 TGAAGTGCAGGGACGAATTGGGTCAAACAGTTTTGGCTGTTTTCTATAAAGTGGATCCAT 481
||| || || | || ||| ||||||||| || | |||||||| || || |||
Sbjct 404 CGAAATGTAGAAAAGATTTGAATCAAACAGTGATGACCATTTTCTATGGCGTTGACCCAA 463
Query 482 CTGATGTAAAGAAGCTGACCGGAGATTTTGGAAAAGTCTTCaaaaaaaCATGTGCCGGTA 541
| ||||||||||||| ||| ||||| ||||| || |||||| ||| ||| |||| |||
Sbjct 464 CAGATGTAAAGAAGCAGACAGGAGAGTTTGGGAAGGTCTTCGAAAGAACTTGTGAAAGTA 523
Query 542 AAACAAAAGAGCACGTTGGGAGATGGAGACAAGCTTTGGCAAAT-GT-C-GCCACAATCG 598
||||| | ||||| ||| || ||||||| ||| ||||| || || | || |||||||
Sbjct 524 AAACAGAGGAGCAGGTTAAGACATGGAGAGAAGTTTTGG---ATGGTGCGGCAACAATCG 580
Query 599 CCGGTTACCATTCGAC-CAACTGGGATAATGAAGCG-GCCATGATTaaaaaaaTCGCTAC 656
| || | |||| | | || |||||||||||||||| | ||||||| ||||||| | |
Sbjct 581 CTGGAGAGCATT-GGCACATCTGGGATAATGAAGCGAG-CATGATTGAAAAAATTTCCAT 638
Query 657 TGATATTTCGAAC-TTGTTGAATAATTCTTCATCATCAAGTGATTTCGATGGGTTGGTTG 715
||| |||| ||| || || ||| ||| ||| | ||||| ||||| || | ||| |||
Sbjct 639 TGACGTTTCAAACATTCTT-AATCGTTCCTCACCCTCAAGAGATTTTGACGATTTGATTG 697
Query 716 GAAT-GAGAGAACATTTAGAGAAGATGGAACCGTTATT-ATGTTTAGACTC-AGATGAAG 772
| || || || ||| | || || ||| || |||| || | | || |||| | ||||||
Sbjct 698 GGATGGA-AGCTCATATGGAAAAAATGAAATCGTTGTTGA-GCCTACACTCTA-ATGAAG 754
Query 773 TGAGGATGATTGGGATTTGGGGTCCTTCTGGGATTGGGAAGACGACCATCGCCAGAGT-T 831
||| ||||||||||||||||||||||||||||||||||||||| ||||| || ||||| |
Sbjct 755 TGAAGATGATTGGGATTTGGGGTCCTTCTGGGATTGGGAAGACCACCATTGCAAGAGTCT 814
Query 832 ATATACAACAAACTCTCCGGC-AGTTTTCAACTGAGTGTCTTTATGGA-ATCTATCGAAG 889
|||| ||| | || ||| | |||| | |||||||||||||||| | ||| |||
Sbjct 815 -TATATAACCGTTTTTCTGGCGA-TTTTGGATTGAGTGTCTTTATGGACAA-TATTAAAG 871
Query 890 CAAA--AT--ATACAAGACCA-TG--TTCCGATGACTATAGTGCCAAGTTGCAGTTACA- 941
| || ||||||||||| || ||| || || || ||||| |||||||| |||||
Sbjct 872 -AGTTGATGCATACAAGACCAGTGGGTTCTGACGATTACAGTGCAAAGTTGCACTTACAG 930
Query 942 ACAGCAGTTTATGTCTCAA-ATAACCAACCAGA-GTGATATGAAGATTTCTCATTTAGGT 999
| | ||||| ||||| | | ||||||||||| | | || | |||||| ||||||||||
Sbjct 931 A-ACCAGTTAATGTC-CGAGATAACCAACCATAAG-GAGACCAAGATTACTCATTTAGGA 987
Query 1000 GTTGTTCAAGATAGGCTAAAAGACAAGAAAGTTCTTGTTGTTCTTGATGGTGTGGA-CAA 1058
||||| | |||||| | || ||||| ||||| ||| |||| |||||| | | || |||
Sbjct 988 GTTGTACCTGATAGGTTGAAGGACAATAAAGTGCTTATTGTCCTTGATAGCATTGATCAA 1047
Query 1059 GTCAATGCAACTAGATGCCATGGTGAAAGAAACTTGGTGGTTTGGTCCTGGGAGTCGGAT 1118
||||| ||||||||||| || | ||||||||| ||||| |||||||||||||||||
Sbjct 1048 -TCAATACAACTAGATGCTATCGCAAAAGAAACTCAATGGTTCGGTCCTGGGAGTCGGAT 1106
Query 1119 TATTATTACAACGCAAGATCGAAAGCTTTTC-AGGTCACATGGGATTAACCATATTTACA 1177
||| || ||||||||||| | ||| ||| | ||| |||||| || ||| |||||||||
Sbjct 1107 TATCATCACAACGCAAGACCAAAAACTTCTGGAGG-CACATGACATCAACAATATTTACA 1165
Query 1178 AGATTGATTTTCCATCAAC-TGAAGAGGCCCTTCAAATCTTGTGCACATATGCTTTTGGT 1236
|| | || |||||||||| | | || || |||||||||| || || ||||||||||||
Sbjct 1166 AGGTGGAGTTTCCATCAAAAT-ATGAAGCTTTTCAAATCTTTTGTACGTATGCTTTTGGT 1224
Query 1237 CAAAACTCCCCTAATG-TCGTTTTGAAGAA-CTTGCTCAGGAAGTTACA 1283
||||| | |||||| | | ||||||| ||| |||||| ||||||||||
Sbjct 1225 CAAAATTTCCCTAAAGATGGTTTTGA-GAAGCTTGCTTGGGAAGTTACA 1272
> AT3G25510.1 | Symbols: | disease resistance protein (TIR-NBS-LRR
class), putative | chr3:9260838-9268797 REVERSE LENGTH=5946
Length=5946
Score = 497 bits (269), Expect = 2e-139
Identities = 681/872 (78%), Gaps = 59/872 (7%)
Strand=Plus/Plus
Query 2079 ATTGGATCTTAGCAGTTTATCATGTCTAGTGGAGC-TCCCTTTC-TCGATTGGAAATGCC 2136
||| ||||||||| | | ||| || ||||||| | |||| || || |||||||| |
Sbjct 2787 ATTAGATCTTAGCGGATGCTCAAGTTTAGTGGAACTTCCC--TCATCTATTGGAAACATC 2844
Query 2137 ACCAACCTTGAGGTTTTAAACCTTCGCCAA-TGCTCAAGTCTGGTAAAGCTCCCCTTTTC 2195
|| || || | | | |||||| | ||| ||||||| |||||| ||||| |||| |||
Sbjct 2845 ACAAATCTCCAAGAGCTGAACCTTTG-CAACTGCTCAAATCTGGTGAAGCTTCCCTCTTC 2903
Query 2196 TATTGGAAACCTTCA-GAAGTTGCAAACTTTGACCTTACG-AGGATGCTC-TAAGCTAGA 2252
||||||||||||||| | ||| ||||||| || | | ||||| | ||| ||||
Sbjct 2904 TATTGGAAACCTTCATCTA-TTGTTCACTTTGA-GTTTGGCAAGATGC-CAAAAGTTAGA 2960
Query 2253 AGATCTTCC-AGCCAACATCAAATTGGGATCTCTCG-GCGAACTTGATCTCACTGATTGC 2310
| |||||| || ||| ||||| ||| |||||| | || |||||||||||| ||||||
Sbjct 2961 GGCTCTTCCGAG-CAATATCAACTTGAAATCTCTTGAACG-ACTTGATCTCACCGATTGC 3018
Query 2311 TTGCTGTTGAAAAGGTTTCCTGAGATCTCCACAAACGTTGAATTTCTC-AGGCTCGATGG 2369
| || ||| ||||| ||||||||||| ||||||||| |||||| ||| | || |||||
Sbjct 3019 TCGCAGTTTAAAAGTTTTCCTGAGATTTCCACAAACATTGAATGCCTCTA-TCTTGATGG 3077
Query 2370 AACTGCAATAGAAGAAGTCCCTTCATCAATCAAATCATGGTCTCGTCTCAATGAGGTGGA 2429
||| ||| |||||||||| |||||||||||||| || |||||| | |||| || | || |
Sbjct 3078 AACCGCAGTAGAAGAAGTGCCTTCATCAATCAAGTCTTGGTCTAGACTCACTGTGTTGCA 3137
Query 2430 TATGTCATACAGT-GAAAATCTCAA-GAACTTTC-CTCATGCTT-TTGACATCATCACAG 2485
|||||||||| | ||||| ||||| ||| ||| | |||| || | |||||||| || |
Sbjct 3138 TATGTCATAC-TTCGAAAAACTCAAGGAA--TTCTCGCATG-TTCTAGACATCATAAC-G 3192
Query 2486 -AGCT-GCACATGACCAATACAGAAATACAAG-AGTTTCCCCCATGGGTC-AAGAAATTC 2541
||| | | || | | | ||| ||||||| || || | |||||| || |||||| ||
Sbjct 3193 TGGCTAG-A-AT-TCGGAGA-AGATATACAAGAAG-TTGCTCCATGGATCAAAGAAA-TC 3246
Query 2542 TCTCGTTTAACA-GTACTCATACTCAAGGGATGCAAAAAGCTGGTATCACTCCCACAGAT 2600
|||||| | ||| | ||| | |||| | ||||| |||||| |||||||||||||| |
Sbjct 3247 TCTCGTCT-ACATGGACTTAGACTCTACAAATGCAGAAAGCTTTTATCACTCCCACAGCT 3305
Query 2601 TCCAGATTCCATCACT-TA-CATATATGCCGAAGATTGTGAGTCCCTGGAGAGACTAGAT 2658
|||||| | | || || || |||| |||| |||| |||||||||| |||||| |||||||
Sbjct 3306 TCCAGAAT-C-TCTCTCTATCATAAATGCTGAAGGTTGTGAGTCCTTGGAGACACTAGAT 3363
Query 2659 TGCTCCTTTC-ACAATCCAAAT-A-T-TTGCCTCAAATTTGCTAAGTGCTTCAAACTGAA 2714
|||| ||| | ||||||| | | | || || || |||||||||||||||||||||||
Sbjct 3364 TGCT-CTTACAACAATCC-CTTGAGTCTT--CTTAATTTTGCTAAGTGCTTCAAACTGAA 3419
Query 2715 TCAAGAAGCCAGAGACCTCATCATCCAGACACCAACTAGTAATTATGCGGTCTTACCCGG 2774
||||||||| |||||| |||||||||||| ||| || |||||| ||||||||||||||||
Sbjct 3420 TCAAGAAGCGAGAGACTTCATCATCCAGATACCGACCAGTAATGATGCGGTCTTACCCGG 3479
Query 2775 CAG-AGAAGTGCCTGCATACTTCACTCACCAATCTACTACTGGAGGTTCCTTGACAATCA 2833
| |||||||||||||||||||||||||| | |||||||||||| ||||||||| ||||
Sbjct 3480 T-GCAGAAGTGCCTGCATACTTCACTCACCGAGCTACTACTGGAGCTTCCTTGACCATCA 3538
Query 2834 AGCTGAACGAGAAGCCTCTTCCTACATCCATGCGGTTTAAGGCTTGCATTTTGCTGGTTC 2893
|| | || |||| |||| || ||||||||||| | ||||||||||| || | ||| ||
Sbjct 3539 AGTTAAATGAGAGGCCTATTTCTACATCCATGAGATTTAAGGCTTGTATCGTACTGATT- 3597
Query 2894 ATAAAGGTGACAATGA-G--GCTCGTGATGAT 2922
| | | ||||||||| | ||| ||||||||
Sbjct 3598 A-AGTG-TGACAATGATGAAGCTGGTGATGAT 3627
> AT3G44630.3 | Symbols: | Disease resistance protein (TIR-NBS-LRR
class) family | chr3:16195984-16200595 FORWARD LENGTH=4031
Length=4031
Score = 422 bits (228), Expect = 1e-116
Identities = 581/747 (78%), Gaps = 42/747 (6%)
Strand=Plus/Plus
Query 2167 TGCTCAAGTCTGGTAAAGCTCCCCTT-TTCTATTGGAAACCTTCAGAAGTTGCAAACT-T 2224
||||||| |||||| |||| |||| |||||||||||||||||| || ||| | | |
Sbjct 2722 TGCTCAAATCTGGTGGAGCT-TCCTTCTTCTATTGGAAACCTTCAAAAATTGTTTA-TGT 2779
Query 2225 TGA-CCTTACGAGGATGCTCTAAGCTAGAAGA-TCTTCCAGCCAACATCAAATTGGGATC 2282
||| | | |||||||||| ||||||||| | ||||||| | |||||||| ||| |||
Sbjct 2780 TGAGAATGA-GAGGATGCTCAAAGCTAGAA-ACTCTTCCAACAAACATCAACTTGATATC 2837
Query 2283 TCTCGGCG-A-ACTTGATCTCACTGATTGCTTGCTGTTGAAAAGGTTTCCTGAGATCTCC 2340
|||| || | |||||||||||| ||||||| || ||||||||| ||||| |||||||||
Sbjct 2838 TCTC--CGTATACTTGATCTCACAGATTGCTCGCAGTTGAAAAGTTTTCCCGAGATCTCC 2895
Query 2341 ACAAACGTTGAATTTCTCAGGCTCGATGGAACTGCAATAGAAGAAGTCCCTTCATCAATC 2400
||| || || | |||||| | | |||||||||||| ||||||| |||| || |||
Sbjct 2896 ACACACATTTCAGAGCTCAGGTTAAAAGGAACTGCAATAAAAGAAGTTCCTTTGTCGATC 2955
Query 2401 AAATCATGGTCTCGTCTCAATG-AGGTGGATATGTCATACAGTGAAAATCTCAA-GAACT 2458
| || ||||||||||| || | | || ||||||||| ||||| || || ||| |
Sbjct 2956 ACGTCGTGGTCTCGTCTTGCTGTATAT-GAAATGTCATACTTTGAAAGCCTTAAGGAA-T 3013
Query 2459 TTCCTCATGCTTTTGACATCATCACAGAGCTGCACATGACCAA-T-ACAGAAATACAAG- 2515
| || |||||| ||||||||||||| || || | || || | | ||| |||||||
Sbjct 3014 TCCCGCATGCTCTTGACATCATCACCGACCTACTTTTG-GTAAGTGA-AGATATACAAGA 3071
Query 2516 AGTTTCCCCCATGGGTCAAGA-AATTCTCTCGTTTAACAGTACTC--ATACTCAAGGGA- 2571
|| |||| ||||||||||||| || | |||||||| || || ||| | |||||| |
Sbjct 3072 AG-TTCCTCCATGGGTCAAGAGAA-TGTCTCGTTT-AC-GTGCTCTTAGACTCAA-CAAC 3126
Query 2572 TGCAAAAAG-CTGGTATCACTCCCACAGA-TTCCAGATT-CCATCACTTACATATATGCC 2628
||| || || ||||||||||||||||| | ||||||||| || | | ||||||||||||
Sbjct 3127 TGC-AATAGTCTGGTATCACTCCCACA-ACTTCCAGATTCCCTTGA-TTACATATATGCA 3183
Query 2629 GA-AGATTGTGAGTCCCTGGAGAGACTAGATTGCTCCTTTCACAATCCAAATATTTGCCT 2687
|| | ||||| ||||||| |||||||| ||||| | |||| |||||||| | || | ||
Sbjct 3184 GATA-ATTGTAAGTCCCTCGAGAGACTGGATTGTTGCTTTAACAATCCAGAGATCCGTCT 3242
Query 2688 CAAATTT-GCTAAGTGCTTCAAACTGAATCAAGAAGCCAGAGACCTCATCATCCAGACAC 2746
| |||| | || ||||||||||||||||||||||||||||| |||||||| || |||
Sbjct 3243 C-TATTTCCCCAAATGCTTCAAACTGAATCAAGAAGCCAGAGATCTCATCATGCACACAT 3301
Query 2747 CAACTAGTAATTATGCGGTCTTACCCGGCAGAGAAGTGCCTGCATACTTCACTCACCAAT 2806
||||| |||| |||||| | ||||| | | | |||||||||| | ||||| ||||| |
Sbjct 3302 CAACTCGTAAATATGCGATGTTACCAAGTATACAAGTGCCTGCCTGCTTCAATCACCGAG 3361
Query 2807 CTACTACTGGAGG-TTCCTTGACAATCAAGCTGAACGAGAAGCCTCTTCCTACATCCATG 2865
||||| |||| || || ||||| ||||||| |||| ||| | ||||||||||| || ||
Sbjct 3362 CTACTTCTGG-GGATTACTTGAAAATCAAGTTGAAGGAGTCGTCTCTTCCTACAACCTTG 3420
Query 2866 CGGTTTAAGGCTTGCATTTTGCTGGTT 2892
| ||||||||||| || |||| |||
Sbjct 3421 AGATTTAAGGCTTGTATCATGCTTGTT 3447
> AT3G44480.1 | Symbols: RPP1, cog1 | Disease resistance protein
(TIR-NBS-LRR class) family | chr3:16090564-16096359 REVERSE
LENGTH=4038
Length=4038
Score = 390 bits (211), Expect = 4e-107
Identities = 679/896 (76%), Gaps = 67/896 (7%)
Strand=Plus/Plus
Query 2026 TCATGTCTAGTGGAGCTCCCTTC-CTCTATTGGGAATCT--CATC-AATCTAAAAG-AAT 2080
||| ||||| | |||||||| || |||||| |||| || || | ||||| ||| |||
Sbjct 2522 TCAAGTCTAATAGAGCTCCC-TCTTTCTATT-GGAA-CTGCCA-CAAATCT-GAAGCAAT 2576
Query 2081 TGGATCTTAGCAGTTTATCATGTCTAGTGGAGCTCCCTTTCTCGATTGGAAATGCCACCA 2140
|| || ||||| | | ||| |||| ||| | ||||| | ||| |||||| || |||
Sbjct 2577 TGAATATTAGCGGATGCTCAAGTCTCGTGAAACTCCCATCCTCAATTGGAGATATCACTG 2636
Query 2141 ACCTTGAGGT-TTTAAACCTTCGCCAA-TGCTCAAGTCTGGTAAAGCTCCCCTT-TTCTA 2197
| || || || ||| | | | | || |||||||||||||| | ||| |||| ||||
Sbjct 2637 ATCTCGAAGTGTTT-GATC-TATCTAACTGCTCAAGTCTGGTGACGCT-TCCTTCCTCTA 2693
Query 2198 TTGGAAACCTTCAGAA-GT-TGCAAACTTTGACCTTA--CGAGGATGCTCTAAGCTAGAA 2253
| ||||||||||| || | ||| || || | ||| |||||||||| ||||||||
Sbjct 2694 TAGGAAACCTTCAAAACTTGTGC-AA-GTT-A-ATTATGAGAGGATGCTCAAAGCTAGAG 2749
Query 2254 GATCTTCCAGCCAACATCAAATTGGGATCTCTCGGCGA-ACTTGATCTCACTGATTGCT- 2311
| ||||||| ||||||||| ||| ||||||| | | |||| ||||||| |||||||
Sbjct 2750 GCTCTTCCAATCAACATCAACTTGAAATCTCTC-GATACACTTAATCTCACAGATTGCTC 2808
Query 2312 TGCTGTTGAAAAGGTTTCCTGAGATCTCCACAAACGTTGAATTTCTCAGGCTCGATGGAA 2371
| | ||||||||| |||||||||||||||||| || || | |||||| | | ||||
Sbjct 2809 T-CAGTTGAAAAGTTTTCCTGAGATCTCCACACACATTTCAGAGCTCAGGTTAAAAGGAA 2867
Query 2372 CTGCAATAGAAGAAG-TCCCTTCATCAATCAAATCATGGTCTCGTCTCAATGAGGTGGAT 2430
|||||||| |||||| |||||| || |||| || ||||||| ||| ||| | |
Sbjct 2868 CTGCAATAAAAGAAGTTCCCTT-GTCGATCATGTCGTGGTCTCCTCTTGCTGACTTTCAG 2926
Query 2431 ATGTCATACAGTGAAAATCTCA-AGAACTTTCCTCATGCTTTTGACATCATCACAG-AGC 2488
|| |||||| ||||| |||| ||| || || |||||||||||||||||||| | |||
Sbjct 2927 ATTTCATACTTTGAAAGCCTCATGGAA-TTCCCGCATGCTTTTGACATCATCAC-GAAGC 2984
Query 2489 TGCACATGACCAATACAGAAATACAAG-AGTTTCCCCCATGGGTCAAGA-AATTCTCTCG 2546
|||| ||| | | | ||| ||||||| || |||| ||||||||||||| || | |||||
Sbjct 2985 TGCATTTGAGC-A-A-AGATATACAAGAAG-TTCCTCCATGGGTCAAGAGAA-TGTCTCG 3039
Query 2547 TTTAACAGT-ACTCATA--CTCAAGGGA-TGCAAAAAGCTGGTATCACTCCCACAGA-TT 2601
||| || || | || || ||||| | ||||| || |||||||||||||| || | ||
Sbjct 3040 TTT-AC-GTGA-TCTTAGTCTCAA-CAACTGCAATAATCTGGTATCACTCCCCCA-ACTT 3094
Query 2602 CCAGATT-CCATCACTTACATATATGCCGA-AGATTGTGAGTCCCTGGAGAGACTAGATT 2659
|||||| || | | |||||||||||| || | ||||| ||||||| |||||||| ||||
Sbjct 3095 TCAGATTCCCTTGA-TTACATATATGCAGATA-ATTGTAAGTCCCTCGAGAGACTGGATT 3152
Query 2660 GCTCCTTTCACAATCCAAATATTTGCCTCAAATTT-GCTAAGTGCTTCAAACTGAATCAA 2718
| | |||| |||||||| | || | ||| |||| | || ||||||||||||||||||
Sbjct 3153 GTTGCTTTAACAATCCAGAGATCCGTCTC-TATTTCCCCAAATGCTTCAAACTGAATCAA 3211
Query 2719 GAAGCCAGAGACCTCATCATCCAGACACCAACTAGTA-ATTATGCGGTCTTACCCGGCAG 2777
||||||||||| |||||||| | ||| | || ||| | ||||| | || || || |
Sbjct 3212 GAAGCCAGAGATCTCATCAT---G-CAC-A-CTTGTATAG-ATGCGATGTTTCCAGGTAC 3264
Query 2778 AGAAGTGCCTGCATACTTCACTCACCAATCTACTACTGGAGG-TTCCTTGACAATCAAGC 2836
| |||||||||| | ||||| ||| | | ||||| |||| || |||||||| |||||||
Sbjct 3265 ACAAGTGCCTGCCTGCTTCATTCATCGAGCTACTTCTGG-GGATTCCTTGAAAATCAAGT 3323
Query 2837 TGAACGAGAAGCCTCTTCCTACATCCATGCGGTTTAAGGCTTGCATTTTGCTGGTT 2892
|||| ||| ||||||||||||| || || | ||||||||||| || |||| |||
Sbjct 3324 TGAAGGAGTCGCCTCTTCCTACAACCTTGAGATTTAAGGCTTGTATCATGCTTGTT 3379
> AT3G44400.1 | Symbols: | Disease resistance protein (TIR-NBS-LRR
class) family | chr3:16045954-16049668 REVERSE LENGTH=3314
Length=3314
Score = 237 bits (128), Expect = 5e-61
Identities = 297/377 (79%), Gaps = 18/377 (5%)
Strand=Plus/Plus
Query 2525 CATGGGTCAAGA-AATTCTCTCGTTTAAC-AGTACTCATACTCAAGGGA-TGCAAAAAGC 2581
|||||||||||| || | |||||||| || || || | |||||| | ||||| || |
Sbjct 2414 CATGGGTCAAGAGAA-TGTCTCGTTT-ACGTGTTCTGACACTCAA-CAACTGCAATAATC 2470
Query 2582 TGGTATCACTCCCACAGA-TTCCAGA-TTCCATCACTTACATATATGCCGA-AGATTGTG 2638
||||||||||||| || | ||||||| | || | | |||||||||||| || | |||||
Sbjct 2471 TGGTATCACTCCCCCA-ACTTCCAGACTCCCTTGA-TTACATATATGCAGATA-ATTGTA 2527
Query 2639 AGTCCCTGGAGAGACTAGATTGCTCCTTTCACAATCCAAATATTTGCCTCA-AATTTGCT 2697
||||||| |||||||| || || | |||| |||||||| | ||| | || | | ||| |
Sbjct 2528 AGTCCCTCGAGAGACTGGACTGTTGCTTTAACAATCCAGAGATTAGTCT-ATATTTTCCC 2586
Query 2698 AAGTGCTTCAAACTGAATCAAGAAGCCAGAGACCTCATCATCCAGACACCAACTAGTA-A 2756
|| ||||||||||||||||||||||||||||| |||||||| || ||| | ||| || |
Sbjct 2587 AATTGCTTCAAACTGAATCAAGAAGCCAGAGATCTCATCATGCACACATCGACTTCTAGA 2646
Query 2757 TTATGCGGTCTTACCCGGCAGAGAAGTGCCTGCATACTTCACTCACCAATCTACTACTGG 2816
|| |||| | |||||||| | | |||||||||| | ||||| ||||| | ||||| ||||
Sbjct 2647 TT-TGCGATGTTACCCGGTACACAAGTGCCTGCCTGCTTCATTCACCGAGCTACTTCTGG 2705
Query 2817 AGG-TTCCTTGACAATCAAGCTGAACGAGAAGCCTCTTCCTACATCCATGCGGTTTAAGG 2875
|| || ||||| ||||||| |||| ||| |||| |||||||| || || | |||||||
Sbjct 2706 -GGATTACTTGAAAATCAAGTTGAAGGAGTCGCCTTTTCCTACAACCTTGAGATTTAAGG 2764
Query 2876 CTTGCATTTTGCTGGTT 2892
|||| || |||| |||
Sbjct 2765 CTTGTATCATGCTTGTT 2781
> AT3G03855.1 | Symbols: | pseudogene of disease resistance protein
| chr3:986948-990738 FORWARD LENGTH=3791
Length=3791
Score = 222 bits (120), Expect = 1e-56
Identities = 309/399 (77%), Gaps = 18/399 (5%)
Strand=Plus/Plus
Query 232 TTTCTTAGTCACATTCAGATGGAGTTTCA-AAG-AATGGGAATCACAC-CATTCATTGAT 288
||||| ||||||| || || |||| ||| ||| || || ||| || ||||||||||
Sbjct 192 TTTCTGAGTCACACTCTGAAGGAG-CTCAGAAGCAA-AGGTATC-GACTTATTCATTGAT 248
Query 289 AATGAGATCGAGAGAGGACAATCCATCGGTCCC-GAACTCATTCGAGCAATTAGA-GAAT 346
||||| ||| ||||||| ||| ||||| ||| || |||| ||| | | | | ||
Sbjct 249 AATGATATCTTGAGAGGAGAATTTATCGG-CCCTGAGCTCAAAAAAGCGA-TCCATGGAT 306
Query 347 CCAAGATCGCAATTATCTTGCTCTC-AAGAA-ACTACGCTTCTTCGAGC-TGGTGTCTTG 403
| | | |||| ||| |||||||||| || || | |||||||||||| | ||||||||||
Sbjct 307 CGAGGCTCGCGATTGTCTTGCTCTCGAA-AAGA-TACGCTTCTTCG-TCGTGGTGTCTTG 363
Query 404 ACGAATTGGCGGAGATTATGAAGTGCAGGGACGAATTGGGTCAAACAGTTTTGGCTGTTT 463
||||||||||||||||||||||||||| ||| | || ||||||||||| |||| |||
Sbjct 364 ACGAATTGGCGGAGATTATGAAGTGCAAGGAAGCTTTTGGTCAAACAGTGATGGCCATTT 423
Query 464 TCTATAAAGTGGATCCATCTGATGTAAAGAAGCTGACCGGAGATTTTGGAAAAGTCTTCa 523
|||| ||||||||||| |||||||| |||||| |||||||| |||||| |||||||||
Sbjct 424 TCTACGAAGTGGATCCAACTGATGTAGAGAAGCAGACCGGAGGTTTTGGGGAAGTCTTCA 483
Query 524 aaaaaaCATGTGCCGGTAAAACAAAAGAGCACGTTGGGAGATGGAGACAAGCT-TTGGCA 582
| |||| |||| ||||||||| ||| || ||| || |||||| |||||| ||| ||
Sbjct 484 CAGAAACTTGTGAGGGTAAAACAGCTGAGGACATTGAGAAATGGAGTCAAGCTCTTG-CA 542
Query 583 AATGTCGCCACAATCGCCGGTTACCATTCGACCAACTGG 621
|| || || || || | |||||| ||| | || ||||
Sbjct 543 AAAGTGGCAACTGTCACTAGTTACCTTTCAAGCAGCTGG 581
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 162841896978
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5