BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg887666 Length=699 Score E Sequences producing significant alignments: (Bits) Value AT3G09430.1 | Symbols: | unknown protein; Has 17 Blast hits to... 948 0.0 > AT3G09430.1 | Symbols: | unknown protein; Has 17 Blast hits to 17 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 17; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr3:2901280-2903072 FORWARD LENGTH=1085 Length=1085 Score = 948 bits (513), Expect = 0.0 Identities = 584/619 (94%), Gaps = 2/619 (0%) Strand=Plus/Plus Query 1 ATGGCGTCGTCATCGTCACGATCGCTGGTTTCTTCCTATACCTTTGATGATAAAGACCTA 60 ||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||||||| Sbjct 1 ATGGCGTCGTCATCGTCACGATCTCTGGTTTCTTCCTACACCTTTGATGAGAAAGACCTA 60 Query 61 GAAGACGCTGATTTATGGGCGGTGATTGATTCCGCCGCCGCTGCAGCTACTATCGCCGGG 120 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 GACGACGCTGATTTATGGGCGGTGATTGATTCCGCCGCCGCTGCAGCTACTATCGCCGGC 120 Query 121 AAATCTCCGAAA-CCCTTAGCTATTAGGTATCCAAATTACAATTCTCCTCCGACGCCTGT 179 |||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 121 AAATCTCCGAAACCCCTT-GCTATTAGGTATCCAAATTACAATTCTCCTCCGACGCCTGT 179 Query 180 TTCGTATCCTTCTCCACAGTCGAAGGTTCTTCAGATCCAGAATCGTAACCCTAATCTTGC 239 |||||||||||||||||||||||| |||||||||||| ||||||||||||||||||| Sbjct 180 TTCGTATCCTTCTCCACAGTCGAAAATTCTTCAGATCCCCAATCGTAACCCTAATCTTGG 239 Query 240 CCGAGGATTGAATGAGGAGTCTACGCGTCCGAACAAAATGGCTAGATCTCGCGTCTTGTC 299 |||||||||||| |||||||||| ||||||| ||||||||| ||||||||| ||||||| Sbjct 240 CCGAGGATTGAACGAGGAGTCTAATCGTCCGAGCAAAATGGCCAGATCTCGCATCTTGTC 299 Query 300 TGAGGTGAAGAGTGAGAGTCCGATGGCTCTTGTTACGACGGCGCACCGGAATTTGACCCC 359 ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| Sbjct 300 TGAGGTGAAGAGTGAGACTCCGATGGCTCTTGTTACGACGGCGCACCGGAATTCGACCCC 359 Query 360 GAATATCATCAATTCGACTAAGTTTTCTTCTCCGGAGAGTTACTTGTCGCCTGGAATTCG 419 |||||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||| | Sbjct 360 GAATATCATCAATTCGACGAAGTTTTCTTCGCCGGAGAGTTACTTGTCGCCTGGGATTAG 419 Query 420 GCAGTCTACTCCCTTTGCGGAGGTTTCTCCGTCAGCGAGCTGTGTTAAGAACGATCCGGT 479 ||| |||| || ||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 420 ACAGCCTACGCCTTTTGCGGAGGTTTCTCCGTCAGCGAGCTGTGTTAAGAACGATCCGAT 479 Query 480 TAATGAGATGCGACATAGCTTGTCTGGGAGCTTTCCTTCTGCTACTCTGTTCAAGGAGTA 539 |||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| Sbjct 480 TAATGAGATGCGACATAGCTTGTCCGGTAGCTTTCCTTCTGCTACTCTGTTCAAGGAGTA 539 Query 540 CCAGAATACAGCAATGGCGATTCTAGAAAAATCTGACTACACGATGATCTCAGGGAAGGC 599 ||||||||||||||||||||||||||| |||||||| ||||||||||| ||||||||||| Sbjct 540 CCAGAATACAGCAATGGCGATTCTAGAGAAATCTGATTACACGATGATATCAGGGAAGGC 599 Query 600 ATACATTAAAAAGTCAGGT 618 |||||| |||||||||||| Sbjct 600 ATACATCAAAAAGTCAGGT 618 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 33857815078 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5