BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg887765

Length=300
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT1G77740.1 | Symbols: PIP5K2 | phosphatidylinositol-4-phosphat...   505    1e-142


> AT1G77740.1 | Symbols: PIP5K2 | phosphatidylinositol-4-phosphate 
5-kinase 2 | chr1:29220538-29224220 FORWARD LENGTH=2698
Length=2698

 Score =  505 bits (273),  Expect = 1e-142
 Identities = 291/300 (97%), Gaps = 0/300 (0%)
 Strand=Plus/Plus

Query  1     AAACCATTGATTCGATTAGGCGCAAACATGCCTGCAAGGGCAGAACGAATGGCGAGAAGA  60
             |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct  2040  AAACCATTGATTCGATTAGGCGCAAACATGCCTGCAAGAGCAGAACGAATGGCGAGAAGA  2099

Query  61    AGCGACTATGATCAGTATTCCTCTGGAGGGACCAACTATCTATCTCACGGAGAGGTCTAC  120
             ||||||||||||||||||||||| |||||||||||||| | |||||| ||||||||||||
Sbjct  2100  AGCGACTATGATCAGTATTCCTCAGGAGGGACCAACTACCAATCTCATGGAGAGGTCTAC  2159

Query  121   GAAGTGGTTCTATATTTTGGAATCATTGACATATTACAAGATTACGACATAAGCAAGAAG  180
             |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct  2160  GAAGTGGTTCTATATTTTGGAATCATTGACATTTTACAAGATTACGACATAAGCAAGAAG  2219

Query  181   ATCGAGCATGCTTACAAGTCTCTACAAGCTGATCCGGCTTCAATCTCAGCCGTTGATCCC  240
             |||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct  2220  ATCGAGCATGCTTACAAGTCTCTACAAGCTGACCCGGCTTCAATCTCTGCCGTTGATCCC  2279

Query  241   AAACTATACTCAAGAAGGTTCAGAGATTTCATCAGCAGAATCTTCATCGAAGACGGCTAA  300
             |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct  2280  AAACTATACTCAAGAAGGTTTAGAGATTTCATCAGCAGAATCTTCATCGAAGACGGCTAA  2339



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 13873898724


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5