BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg887777

Length=609
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT2G29260.1 | Symbols:  | NAD(P)-binding Rossmann-fold superfam...   643    0.0  


> AT2G29260.1 | Symbols:  | NAD(P)-binding Rossmann-fold superfamily 
protein | chr2:12582519-12584101 FORWARD LENGTH=1120
Length=1120

 Score =  643 bits (348),  Expect = 0.0
 Identities = 430/468 (92%), Gaps = 12/468 (3%)
 Strand=Plus/Plus

Query  5    TGGTGCTTGACATGGCTTCTCACTTGTACATAAATCCACCTCAAAACcttcactttcttc  64
            |||||||||||||||||||||||||||||| ||||||||||||||||||||||  | || 
Sbjct  6    TGGTGCTTGACATGGCTTCTCACTTGTACACAAATCCACCTCAAAACCTTCAC--T-TT-  61

Query  65   cttcttcttcttcttcttcCCTTAAACCTCACTTATACCTCTCTTTCAAACGCATAAACC  124
              | ||||||||||||||||||||||||||| |||| |||||||||||||||||||||||
Sbjct  62   -AT-TTCTTCTTCTTCTTCCCTTAAACCTCATTTATGCCTCTCTTTCAAACGCATAAACC  119

Query  125  C-ACAACCCAAATCCTCATCCTCCTCCGTCTTCGTCCCTTGCGCATCACAGAGCTCCATT  183
            | | ||| ||||||||| ||||| |||||||||||||||| |||||||||||| ||||||
Sbjct  120  CTA-AACACAAATCCTCTTCCTCTTCCGTCTTCGTCCCTTACGCATCACAGAGTTCCATT  178

Query  184  GCCATTACTTCCAACGAAAGATGGTCTCTCAATGGATTGTCTGCTCTTGTCACCGGCGGC  243
            |||||||| ||||| ||||||||||||||||||||| |||||||||||||||||||||||
Sbjct  179  GCCATTACCTCCAAGGAAAGATGGTCTCTCAATGGAATGTCTGCTCTTGTCACCGGCGGC  238

Query  244  ACTCGCGGAATCGGGCGTGCGATTGTGGAGGAATTGGCTGGTCTTGGAGCA-AAGGTTCA  302
            ||||| ||||| ||||||||||||||||||||||||||||||||||||||| || |||||
Sbjct  239  ACTCGTGGAATTGGGCGTGCGATTGTGGAGGAATTGGCTGGTCTTGGAGCAGAA-GTTCA  297

Query  303  CACTTGCGCTCGAAATGAGAACGAGCTGGAGAATTGTTTGAGTGATTGGAACCGTTATGG  362
            |||||||||||| |||||| |||||||||||||||||||||||||||||||||||| |||
Sbjct  298  CACTTGCGCTCGGAATGAGTACGAGCTGGAGAATTGTTTGAGTGATTGGAACCGTTCTGG  357

Query  363  TCT-CAGAGTTGCGGGATCCGTCTGCGATGTCTCTGATCAATCTCAGAGAGAGGATTTGA  421
            | | | ||||||| |||||||| |||||||||||||||| |||||||||||||| |||||
Sbjct  358  TTTTC-GAGTTGCTGGATCCGTTTGCGATGTCTCTGATCGATCTCAGAGAGAGGCTTTGA  416

Query  422  TGGAGACTGTATCATCTGTCTTTGACGGGAAGCTTCATATCCTTGTAA  469
            ||||||| || |||||||| ||||| ||||||||||||||||||||||
Sbjct  417  TGGAGACCGTGTCATCTGTGTTTGAAGGGAAGCTTCATATCCTTGTAA  464



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 29336741848


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5