BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg887783 Length=480 Score E Sequences producing significant alignments: (Bits) Value AT2G31960.1 | Symbols: ATGSL03, GSL03, ATGSL3 | glucan synthase... 793 0.0 AT1G05570.1 | Symbols: CALS1, GSL06, ATGSL6, ATGSL06, GSL6 | ca... 560 4e-159 > AT2G31960.1 | Symbols: ATGSL03, GSL03, ATGSL3 | glucan synthase-like 3 | chr2:13588887-13600229 FORWARD LENGTH=6067 Length=6067 Score = 793 bits (429), Expect = 0.0 Identities = 468/486 (96%), Gaps = 6/486 (1%) Strand=Plus/Plus Query 1 ATGGCTCAAAGGAGAGGACCTGATCCGCCTCCGCCCCAGAGGCGGATTCTGCGGACTCAA 60 ||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||| Sbjct 52 ATGGCTCAAAGGAAAGGACCTGATCCGCCTCCGCCTCAAAGGCGGATTCTGCGGACTCAA 111 Query 61 ACTGCTGGTAATCTCGGAGAGGCTATGTTAGACAGTGAAGTGGTGCCATCGTCTCTTGTG 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 112 ACTGCTGGTAATCTCGGAGAGGCTATGTTGGACAGTGAAGTGGTGCCATCGTCTCTTGTG 171 Query 121 GAGATTGCTCCTATCCTTCGTGTAGCTAATGAAGTAGAAGCTAGTAACCCGCGTGTTGCT 180 ||||||||||| ||||||||||||||||||||||| |||||||||||||| ||||||||| Sbjct 172 GAGATTGCTCCGATCCTTCGTGTAGCTAATGAAGTTGAAGCTAGTAACCCCCGTGTTGCT 231 Query 181 TACTTA---CGGTTTTATGCGTTTGAGAAGGCACACAGGCTTGATCCCACATCAAGTGGA 237 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 232 TACTTATGTCGGTTTTATGCGTTTGAGAAGGCACACAGGCTTGATCCCACATCAAGTGGA 291 Query 238 CGAGGTGTTCGCCAGTTTAAGACCGCGCTTCTTCAACGGTTAGAACGGGAGAATGAAACA 297 || |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 292 CGTGGTGTTCGCCAGTTTAAGACTGCGCTTCTTCAACGGTTAGAACGGGAGAATGAAACA 351 Query 298 ACTCTTGCAGGAAGGCAGAAGAGTGATGCACGCGAAATGCAAAGTTTCTATCAACACTAC 357 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 352 ACTCTTGCAGGAAGGCAGAAGAGTGATGCACGCGAAATGCAAAGTTTCTATCAACACTAC 411 Query 358 TACAAGAAATACATCCAAGCTCTGCTAAACGCCGCTGACAAAGCTGAC-G--CTCAACTT 414 ||||||||||||||||||||| ||| |||||||||||||||||||||| | |||||||| Sbjct 412 TACAAGAAATACATCCAAGCTTTGCAAAACGCCGCTGACAAAGCTGACCGTGCTCAACTT 471 Query 415 ACAAAGGCATATCAAACTGCTGCTGTTCTCTTTGAAGTCTTAAAAGCTGTTAATCAGACA 474 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 472 ACAAAGGCATATCAAACTGCTGCTGTTCTCTTTGAAGTCTTGAAAGCTGTTAATCAGACA 531 Query 475 GAAGAT 480 |||||| Sbjct 532 GAAGAT 537 > AT1G05570.1 | Symbols: CALS1, GSL06, ATGSL6, ATGSL06, GSL6 | callose synthase 1 | chr1:1647706-1659437 REVERSE LENGTH=6231 Length=6231 Score = 560 bits (303), Expect = 4e-159 Identities = 430/490 (88%), Gaps = 14/490 (3%) Strand=Plus/Plus Query 1 ATGGCTCAAAGGAGAGG-ACCTGATCCGCCTCCGCCCCAGAGGCGGATTCTGCGGACTCA 59 ||||||||||| || || ||||||||||||||| || ||||||||||||||||||||||| Sbjct 205 ATGGCTCAAAGAAG-GGAACCTGATCCGCCTCCACCGCAGAGGCGGATTCTGCGGACTCA 263 Query 60 AACTGCTGGTAATCTCGGAGAGGCTATG-TTAGACAGTGAAGTGGTGCCATCGTCTCTT- 117 |||| ||||| |||||||||||||||| || || |||||||| || || || ||| || Sbjct 264 GACTGTTGGTAGTCTCGGAGAGGCTATGCTT-GATAGTGAAGTTGTTCCCTCTTCT-TTA 321 Query 118 GTGGAGATTGCTCCTATCCTTCGTGTAGCTAATGAAGTAGAAGCTAGTAACCCGCGTGTT 177 || ||||||||||| || || ||||| ||||||||||| ||||||||||| || || ||| Sbjct 322 GTTGAGATTGCTCCGATTCTACGTGTGGCTAATGAAGTTGAAGCTAGTAATCCACGAGTT 381 Query 178 GCTTACTTACG--GTTT-TATGCGTTTGAGAAGGCACACAGGCTTGATCCCACATCAAGT 234 |||||| || | |||| || || ||||||||||| || ||||||||||| || |||||| Sbjct 382 GCTTACCTATGTCGTTTCTACGCATTTGAGAAGGCGCATAGGCTTGATCCAACTTCAAGT 441 Query 235 GGACGAGGTGTTCGCCAGTTTAAGACCGCGCTTCTTCAACGGTTAGAACGGGAGAATGAA 294 || || ||||||||||||||||||||||||||||||||||| |||||| ||||||||||| Sbjct 442 GGTCGTGGTGTTCGCCAGTTTAAGACCGCGCTTCTTCAACGATTAGAAAGGGAGAATGAA 501 Query 295 ACAACTCTT-GCAGGAAGGCAGAAGAGTGATGCACGCGAAATGCAAAGTTTCTATCAACA 353 |||||| || ||||||||||| |||||||||||||| |||||||| |||||||||||||| Sbjct 502 ACAACT-TTGGCAGGAAGGCAAAAGAGTGATGCACGTGAAATGCAGAGTTTCTATCAACA 560 Query 354 CTACTACAAGAAATACATCCAAGCTCTGCTAAACGCCGCTGACAAAGCTGAC-G--CTCA 410 ||||||||||||||||||||||||| |||| || || || || ||||||||| | |||| Sbjct 561 CTACTACAAGAAATACATCCAAGCTTTGCTGAATGCTGCGGATAAAGCTGACCGTGCTCA 620 Query 411 ACTTACAAAGGCATATCAAACTGCTGCTGTTCTCTTTGAAGTCTTAAAAGCTGTTAATCA 470 |||||||||||| |||||||||||||| ||||||||||||||||| || ||||||||||| Sbjct 621 ACTTACAAAGGCCTATCAAACTGCTGCCGTTCTCTTTGAAGTCTTGAAGGCTGTTAATCA 680 Query 471 GACAGAAGAT 480 ||||||||| Sbjct 681 AACAGAAGAT 690 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 22856536885 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5