BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg887836

Length=1674
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT1G67520.1 | Symbols:  | lectin protein kinase family protein ...  87.9    3e-16


> AT1G67520.1 | Symbols:  | lectin protein kinase family protein 
| chr1:25302726-25305857 REVERSE LENGTH=2387
Length=2387

 Score = 87.9 bits (47),  Expect = 3e-16
 Identities = 58/63 (92%), Gaps = 2/63 (3%)
 Strand=Plus/Plus

Query  396  GGTTTTGTGGCAAAGTTTCGATTATCCAACAAACACT-TTACTTCCTGGGATGAAACTCG  454
            ||||||||||||||||||||||||||||||| | ||| || ||||||||||||||||| |
Sbjct  441  GGTTTTGTGGCAAAGTTTCGATTATCCAACAGATACTCTT-CTTCCTGGGATGAAACTAG  499

Query  455  GTT  457
            |||
Sbjct  500  GTT  502



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 82730498160


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5