BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg887847 Length=183 Score E Sequences producing significant alignments: (Bits) Value AT3G22090.1 | Symbols: | unknown protein; BEST Arabidopsis tha... 117 4e-26 > AT3G22090.1 | Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G71470.2); Has 12 Blast hits to 12 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 12; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr3:7782912-7783561 FORWARD LENGTH=542 Length=542 Score = 117 bits (63), Expect = 4e-26 Identities = 88/100 (88%), Gaps = 2/100 (2%) Strand=Plus/Plus Query 67 GAGTTGGTGGAAATTAGTGTTGCTCAAGGTGTGATTTC-GGGGAAGGATGCTTTTGAGAG 125 ||||| ||||| |||| ||| ||||||||| ||||||| | ||| | |||||||||||| Sbjct 252 GAGTTAGTGGAGATTATTGTAGCTCAAGGTTTGATTTCTGAAGAA-GTTGCTTTTGAGAG 310 Query 126 AGTCAAGCTTATTGGTGATGACAAGGCTAAAGAGTTGAAT 165 ||||||||||||||||||||| || ||||||||||||||| Sbjct 311 AGTCAAGCTTATTGGTGATGATAAAGCTAAAGAGTTGAAT 350 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 8048216160 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5