BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg887864

Length=405
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT5G44190.1 | Symbols: GLK2, ATGLK2, GPRI2 | GOLDEN2-like 2 | c...   619    5e-177


> AT5G44190.1 | Symbols: GLK2, ATGLK2, GPRI2 | GOLDEN2-like 2 | 
chr5:17798369-17800824 FORWARD LENGTH=1404
Length=1404

 Score =  619 bits (335),  Expect = 5e-177
 Identities = 383/406 (94%), Gaps = 3/406 (1%)
 Strand=Plus/Plus

Query  1     AAATATAGGTCACATCGGAAACATCTACTAGCGCGTGAAGCAGAAGCTGCCAGCTGGAAT  60
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  655   AAATATAGGTCACATCGGAAACATCTACTAGCGCGTGAAGCAGAAGCTGCCAGCTGGAAT  714

Query  61    CTCCGGCGACATGCGACGGTGGCAGTGGCCGGAGTAGGAGGAGGTGGGAAGAAGCCATGG  120
             |||||| ||||||| |||||||||||| |||||||||||||||| ||||||||||| |||
Sbjct  715   CTCCGGAGACATGCCACGGTGGCAGTGCCCGGAGTAGGAGGAGGAGGGAAGAAGCCGTGG  774

Query  121   ACGGCTCCTGCCTTAGGCTATCCACCACACGTGGCACCAATGCATCATGGCCACTTCAGG  180
             || |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||
Sbjct  775   ACAGCTCCTGCCTTAGGCTATCCTCCACACGTGGCACCAATGCATCATGGTCACTTCAGG  834

Query  181   CCTTTGCACGTGTGGGGTCATCCTACGTGGCCTAAACACAAGCCTAATACTCCTGCGTCT  240
             ||||||||||| |||||||||||||||||||| |||||||||||||||||||| ||||||
Sbjct  835   CCTTTGCACGTATGGGGTCATCCTACGTGGCCAAAACACAAGCCTAATACTCCGGCGTCT  894

Query  241   GCTCATCGGACGTATCCGATTCCGTT-AGTTGCGGCGGCTCCGGCATCTTGGCCAGGTCA  299
             ||||||||||||||||| || |||   | |||||||||||||||||||||||||||||||
Sbjct  895   GCTCATCGGACGTATCCAATGCCGGCCA-TTGCGGCGGCTCCGGCATCTTGGCCAGGTCA  953

Query  300   TCCGCCGTACTGGCACCAACAACCACTATATCCACAGGGATATGGTATCGCATCATCGAA  359
             ||| ||||||||||| || |||||||| |||||||||||||||||||| |||||||||||
Sbjct  954   TCCACCGTACTGGCATCAGCAACCACTCTATCCACAGGGATATGGTATGGCATCATCGAA  1013

Query  360   TCATTCAAGCATCGGTGTTCCCACAAGACAATTAGGAACCCACTAA  405
             ||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct  1014  TCATTCAAGCATCGGTGTTCCCACAAGACAATTAGGA-CCCACTAA  1058



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 19152012369


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5