BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg887883
Length=2262
Score E
Sequences producing significant alignments: (Bits) Value
AT2G29110.1 | Symbols: ATGLR2.8, GLR2.8 | glutamate receptor 2.... 1559 0.0
AT2G29100.1 | Symbols: ATGLR2.9, GLR2.9 | glutamate receptor 2.... 1197 0.0
AT2G29120.1 | Symbols: ATGLR2.7, GLR2.7 | glutamate receptor 2.... 767 0.0
> AT2G29110.1 | Symbols: ATGLR2.8, GLR2.8 | glutamate receptor
2.8 | chr2:12506880-12510552 REVERSE LENGTH=2844
Length=2844
Score = 1559 bits (844), Expect = 0.0
Identities = 992/1063 (93%), Gaps = 12/1063 (1%)
Strand=Plus/Plus
Query 1 ATGAAAGACACTGTTCAGGCTTCAGCTGCAGCCTTGGACCTAATCAAGAACGAGCAAGTG 60
|||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 235 ATGAAAGACACTGTGCAGGCTTCAGCTGCAGCCTTGGACCTAATCCAGAACGAGCAAGTG 294
Query 61 AGCGCCATCATCGGACCAAGAAACTCTATGCAAGCAGAGTTTATGATCAGACTCGCCAAC 120
|| |||||||||||||||| | |||||||||| ||| |||||||||||| ||| ||||||
Sbjct 295 AGTGCCATCATCGGACCAATAGACTCTATGCAGGCAAAGTTTATGATCAAACTGGCCAAC 354
Query 121 AAAACTCAAGTACCAACCATCACATTCTCTGCAACAAGTCCTCTTTTAACATCCATTAAA 180
|||||||||||||| |||||| ||||||| |||||||| ||||||||||||||||| |||
Sbjct 355 AAAACTCAAGTACCGACCATCTCATTCTCAGCAACAAGCCCTCTTTTAACATCCATCAAA 414
Query 181 AGCGATTACTTCGTCCGAGCCACTATCGATGACTCATACCAGGTCAAAGCCATTGCAGCC 240
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 415 AGCGATTACTTCGTCCGAGGCACTATCGATGACTCATACCAGGTCAAAGCCATTGCAGCC 474
Query 241 ATTTTTGAATCCTTCGGATGGAGAAGTGTCGTCGCAATTTATGTGGACAACGAGTTAGGT 300
|| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 475 ATATTTGAATCCTTTGGATGGAGAAGTGTCGTCGCCATTTATGTGGACAACGAGTTAGGT 534
Query 301 GAAGGAATCATGCCTTACTTGTTTGACGCTTTACAAGACGTGCAAGTCGATAGAAGTGTG 360
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 535 GAAGGAATCATGCCTTACTTGTTTGACGCTTTACAAGACGTGCAAGTTGATAGAAGTGTG 594
Query 361 ATCTCCC-CGGAGGCTAACGATGACCAGATTCTAAAAGAACTTTATAAGCTCATGACGAG 419
||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 595 ATC-CCCTCGGAGGCTAACGATGACCAGATTCTAAAAGAACTTTATAAGCTCATGACGAG 653
Query 420 GCAGACTAGGGTTTTCGTTGTCCACATGGCCTCACGTCTTGCTTCACGGATTTTTGAGAA 479
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 654 GCAGACTAGGGTTTTCGTTGTCCACATGGCATCACGTCTTGCTTCACGGATTTTTGAGAA 713
Query 480 AGCTAAAGAGATCGGGATGATGGAGGAAGGGTATGTATGGTTAATGACCAATGGAATGAC 539
||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 714 AGCTACAGAGATTGGGATGATGGAGGAAGGGTATGTATGGTTAATGACCAATGGAATGAC 773
Query 540 GCATATGATGAGACATATCAACCATGGTCGTAGCTTAAATAATATAGAGGGCGTGTTAGG 599
|||||||||||||||||| | ||||||||||||||||||| |||||| |||||||||||
Sbjct 774 TCATATGATGAGACATATCCATCATGGTCGTAGCTTAAATACTATAGATGGCGTGTTAGG 833
Query 600 TGTGAGGAGCCATGTCCCCCAATCGAAAGAGCTCAAAGATTTCGGCTTGCGATGGAATAA 659
||||||||||||||||||| ||||||||| |||| |||||||| | ||| ||||||| ||
Sbjct 834 TGTGAGGAGCCATGTCCCCAAATCGAAAGGGCTCGAAGATTTCCGTTTGAGATGGAA-AA 892
Query 660 -AAAGTTCGAA-AAGGAGAATCCAACGATGAGAGATGATCTAACCATTTTTGGATTACGG 717
||| ||| || |||||||||||| | |||| |||||||| | ||||||||||||| ||
Sbjct 893 GAAATTTC-AAGAAGGAGAATCCATGGCTGAGGGATGATCTTAGCATTTTTGGATTATGG 951
Query 718 GCGTATGATTCAACCACTGCATTGGCCATGGCCGTGGAGAAAACCAACATAAGAAGCTTT 777
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 952 GCGTATGATTCAACCACTGCATTGGCCATGGCCGTGGAGAAAACCAACATAAGCAGCTTT 1011
Query 778 CCGTATGATAATGCGAGTG-CGTCGTCAAATAACATGACAGATTTGGGGAAC-CTAGGTG 835
|||||| |||||||||||| | |||||||||||||||||||||||||||| | ||| |
Sbjct 1012 CCGTATAATAATGCGAGTGGC-TCGTCAAATAACATGACAGATTTGGGGA-CGCTACACG 1069
Query 836 TCTCTCGCTACGGTCAAAGTCTTTTAAATGCTCTCTCGGAAATAAGATTCAATGGTTTGG 895
|||||||||| |||| ||||||| || | ||||||||||||||||||||||||||| |||
Sbjct 1070 TCTCTCGCTATGGTCCAAGTCTTCTAGAGGCTCTCTCGGAAATAAGATTCAATGGTCTGG 1129
Query 896 CAGGAGAG-TTTAAACTCATAGACAAGCAGCTCGAGTCACCAAAGTTTGAGATCATAAAT 954
||||| || ||||| |||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1130 CAGGA-AGGTTTAATCTCATAGACAGGCAGCTCGAGTCACCAAAGTTTGAGATCATAAAT 1188
Query 955 TTTGTAGGAAATGAAGAGAGGATTATCGGATTTTGGACACCGAGCAATGGACTTGTGAAT 1014
||||| |||||||||||||| ||| |||||||||||||||||||||||||||||||||||
Sbjct 1189 TTTGTCGGAAATGAAGAGAGAATTGTCGGATTTTGGACACCGAGCAATGGACTTGTGAAT 1248
Query 1015 GCAAATTCAAACAAAACAACTTCATTTACAGGGGAGAGGTTTG 1057
| |||||||||||||||||| ||||||||||||||||||||||
Sbjct 1249 GTAAATTCAAACAAAACAACGTCATTTACAGGGGAGAGGTTTG 1291
Score = 1066 bits (577), Expect = 0.0
Identities = 678/727 (93%), Gaps = 6/727 (1%)
Strand=Plus/Plus
Query 1539 GCTCAAGCCTTTTGGTTCTTCCGAAGAATG-CGACGCACTTTTGTCCAATGGCAGTATTT 1597
||||||||||||||| |||||||||||||| | |||| |||||||||||||| ||||| |
Sbjct 2121 GCTCAAGCCTTTTGGGTCTTCCGAAGAATGTC-ACGCGCTTTTGTCCAATGGTAGTATAT 2179
Query 1598 CAGTAGCTTTCGACGAAATTGCCTACCTTAAGGCTATCCTTTCTCAATACTGCTCCAAAT 1657
||| ||||||||||||| |||| ||||||| |||||||||||||||||||||||||||||
Sbjct 2180 CAGCAGCTTTCGACGAAGTTGCTTACCTTAGGGCTATCCTTTCTCAATACTGCTCCAAAT 2239
Query 1658 ATGCCATGGTTGAACCTACATTTAAGACTGCTGGTTTTGGCTTTGCATTCCCCAAGAATT 1717
||||||| ||||| |||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 2240 ATGCCATTGTTGAGCCTACATTTAAGACTGCTGGTTTTGGCTTTGCATTCCCCAGGAATT 2299
Query 1718 CTCCTTTGACAGGAGATGTCTCAAGGGCTATCTTAAATGTGACTCAAGGAGATGAAATGC 1777
| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 2300 CACCTTTGACAGGAGATGTCTCAAAGGCTATCTTAAATGTGACTCAAGGAGATGAAATGC 2359
Query 1778 GACACATCGAGAACAAATGGTTCATGAGACAGAATGATTGTCCTGATCCAAAGACCGCTC 1837
|||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||
Sbjct 2360 AACACATCGAGAACAAATGGTTCATGAAACAAAATGATTGTCCTGATCCAAAGACCGCTC 2419
Query 1838 TTTCGTCTAACCGTCTAAGCCTTAGCAGCTTTTCGGGTCTGTTTCTAATAGCAGGCATTG 1897
||||||| ||||||||||||||| | ||||||| ||||||||||||||||||||||||||
Sbjct 2420 TTTCGTCGAACCGTCTAAGCCTTCGTAGCTTTTGGGGTCTGTTTCTAATAGCAGGCATTG 2479
Query 1898 CTTCATTCTTGGCAGTACTCATCTTCGT-TTCCCTTTTCTTGTACGAAAATAGGCATACA 1956
|||||||||||||| ||||||||||||| || |||||||||||||||||||||||||||
Sbjct 2480 CTTCATTCTTGGCACTACTCATCTTCGTGTT-TCTTTTCTTGTACGAAAATAGGCATACA 2538
Query 1957 CTATGTGAGGATTCCGAAGATTCGATATGGGGTACGCTAACGTCTTTATTCAGAAACTTC 2016
|||||||| ||||||||||||||||||||| ||| |||||||||||||||||||||||||
Sbjct 2539 CTATGTGATGATTCCGAAGATTCGATATGGCGTAAGCTAACGTCTTTATTCAGAAACTTC 2598
Query 2017 GATGAGAAAGACATAAAGTCGCATACTTTCAAGACCAGCGCTGTTCATAATGTGAGTTCA 2076
|||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||
Sbjct 2599 GATGAGAAAGACATAAAGTCGCATACTTTCAAGAGCAGCGCTGTTCATCATGTGAGTTCA 2658
Query 2077 CCTATGACTCACTACACTCCGAGCCCTTCAACTGTGCAAAGC-CAACCATGGCGACATAG 2135
||||||||||| |||| |||||||||||||||| |||||| | || ||| ||| ||||||
Sbjct 2659 CCTATGACTCAGTACATTCCGAGCCCTTCAACTTTGCAAATCGCA-CCACGGCCACATAG 2717
Query 2136 CCCGTCACAAAACAGGGGGTTTGAACTAAGAAGAGTGTCTTTTACCCCGAATGAAGAACG 2195
||| |||||| |||||| ||||||||||||||||||||| ||||||||||||||||||||
Sbjct 2718 CCCATCACAAGACAGGGCGTTTGAACTAAGAAGAGTGTCATTTACCCCGAATGAAGAACG 2777
Query 2196 CTTAACTACGGAAACTATACATCATGAAGATGAAGAATCTGATATTGAATGTGGAGTTGA 2255
||||||||| ||||||||||| ||||||||||||||||||||||||||||| |||||
Sbjct 2778 GTTAACTACGCAAACTATACATTTTGAAGATGAAGAATCTGATATTGAATGTGTTGTTGA 2837
Query 2256 ACAATAG 2262
|||||||
Sbjct 2838 ACAATAG 2844
Score = 793 bits (429), Expect = 0.0
Identities = 466/484 (96%), Gaps = 2/484 (0%)
Strand=Plus/Plus
Query 1057 GACATCTTTGAAGCTGCTCTTAAGAAGTTGCCATATTCAGTCATTCCACAATACTACCGT 1116
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1462 GACATCTTTGAAGCTGCTCTTAAGAAGTTACCATATTCAGTCATTCCACAATACTACCGT 1521
Query 1117 TTCGAGTCTCCCGATGATCACTACGATGACTTGGTCTA-CAAGCTCGACAACGGGACTTT 1175
||||||||||| |||||| ||||||||||||||||||| ||| |||| |||||||||||
Sbjct 1522 TTCGAGTCTCCGGATGATGACTACGATGACTTGGTCTATAAAG-TCGATAACGGGACTTT 1580
Query 1176 GGATGCAGTTGTTGGAGATGTAACTATCACAGCGTACAGGTCTTTGTATGCTGACTTCAC 1235
|||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| ||
Sbjct 1581 GGATGCAGTTGTTGGAGATGTAACCATCACAGCGTACAGATCTTTGTATGCTGACTTTAC 1640
Query 1236 GTTACCATACACAGAGTCAGGAGTGTCTATGATGGTGCCGGTGAGAGACAATGAGAATAA 1295
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1641 CTTACCATACACAGAGTCAGGAGTGTCTATGATGGTGCCGGTGAGAGACAACGAGAATAA 1700
Query 1296 GAACACATGGGTGTTCCTCAAACCTTGGACCTTAGAATTATGGGTCACCACTGGTTGTTT 1355
|||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||
Sbjct 1701 GAACACATGGGTGTTCCTCAAACCTTGGGGCTTAGACTTATGGGTCACCACTGCTTGTTT 1760
Query 1356 CTTCGTCCTCATTGGTTTTGTTGTGTGGTTGTTCGAACATAGAGTCAACACAGACTTCCG 1415
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1761 CTTCGTCCTCATTGGTTTTGTTGTGTGGTTGTTCGAACATAGAGTCAACACCGACTTCCG 1820
Query 1416 TGGACCGCCTCACCACCAGATCGGCACTAGTTTTTGGTTCTCTTTCTCCACCATGGTTTT 1475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1821 TGGACCGCCTCACCACCAGATCGGCACTAGTTTTTGGTTCTCTTTCTCCACCATGGTTTT 1880
Query 1476 TGCCCACCGTGAGAAGGTAGTGAGCAACTTAGCAAGGTTTGTGGTGGTTGTGTGGTGCTT 1535
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1881 TGCCCACCGTGAGAAGGTAGTGAGCAACTTAGCAAGGTTTGTGGTGGTTGTATGGTGCTT 1940
Query 1536 TGTG 1539
||||
Sbjct 1941 TGTG 1944
> AT2G29100.1 | Symbols: ATGLR2.9, GLR2.9 | glutamate receptor
2.9 | chr2:12501092-12504912 REVERSE LENGTH=2823
Length=2823
Score = 1197 bits (648), Expect = 0.0
Identities = 921/1050 (88%), Gaps = 29/1050 (3%)
Strand=Plus/Plus
Query 1 ATGAAAGACACTGTTCAGGCTTCAGCTGCAGCCTTGGACCTAATCAAGAA-CGAGCAAGT 59
||| |||| |||||||||||||||||||||||||||||||||||||| || |||||||||
Sbjct 226 ATGGAAGATACTGTTCAGGCTTCAGCTGCAGCCTTGGACCTAATCAA-AACCGAGCAAGT 284
Query 60 GAGCGCCATCATCGGACCAAGAAACTCTATGCAAGCAGAGTTTATGATCAGACTCGCCAA 119
|||||||||||||||||||| |||||||||||||||||| |||||||||| ||| |||||
Sbjct 285 GAGCGCCATCATCGGACCAATAAACTCTATGCAAGCAGATTTTATGATCAAACTGGCCAA 344
Query 120 CAAAACTCAAGTACCAACCATCACATTCTCTGCAACAAGTCCTCTTTTAACATCCATTAA 179
||||||||||||||| ||||||||||||||||||||||| |||||||| |||||||| ||
Sbjct 345 CAAAACTCAAGTACCGACCATCACATTCTCTGCAACAAGCCCTCTTTTGACATCCATCAA 404
Query 180 AAGCGATTACTTCGTCCGAGCCACTATCGATGACTCATACCAGGTCAAAGCCATTGCAG- 238
|||| |||||||||| ||||||||||||| ||||||| |||||||| |||||||| |
Sbjct 405 AAGCCCTTACTTCGTCAGAGCCACTATCGACGACTCATCCCAGGTCAGGGCCATTGC-GT 463
Query 239 CCATTTTTGAA-TCCTTCGGATGGAGAAGTGTCGTCGCAATTTATGTGGACAACGAGTTA 297
||||||| || || || || |||||||| |||||||||||||||||||||||||||||
Sbjct 464 CCATTTTCAAATTCTTTAGG-TGGAGAAGGGTCGTCGCAATTTATGTGGACAACGAGTTT 522
Query 298 GGTGAAGGAATCATGCCTTACTTGTTTGACGCTTTACAAGACGTGCAAGTCGATAGAAGT 357
||||||||| ||||||||| ||||||||||||||||||||||||| ||||| | ||||||
Sbjct 523 GGTGAAGGATTCATGCCTTTCTTGTTTGACGCTTTACAAGACGTGGAAGTCAAGAGAAGT 582
Query 358 GTGATCTCC-CCGGAGGCTAACGATGACCAGATTCTA-AAAGAACTTTATAAGCTCAT-G 414
|||||| || |||||||||| |||||| |||||| | ||||||||| ||||||||| |
Sbjct 583 GTGATC-CCTCCGGAGGCTATCGATGATGAGATTC-AGAAAGAACTTCGTAAGCTCATGG 640
Query 415 ACGAGGC-AGACTAGGGT-TTTCGTTGTCCACATGGCCTCACGTCTTGCTTCACGGATTT 472
| ||||| || | || || ||| ||||||||||||| ||| |||| |||| |||| |||
Sbjct 641 A-GAGGCAAG-CGAGAGTATTT-GTTGTCCACATGGAATCAAGTCTCGCTTTACGGGTTT 697
Query 473 TTGAGAAAGCTAAAGAGATCGGGATGATGGAGGAAGGGTATGTATGGTTAATGACCAATG 532
|| ||| ||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct 698 TTCAGATAGCTAGGGATATCGGGATGATGGAGGAAGGGTATGTATGGTTAATGACCAATG 757
Query 533 GAATGACGCATATGATGAGACATATCAACCATGGTCGTAGCTTAAATAATATAGAGGGCG 592
||||||||||||||||||||||||| ||| |||||||||||||||||| |||||||||||
Sbjct 758 GAATGACGCATATGATGAGACATATAAACAATGGTCGTAGCTTAAATACTATAGAGGGCG 817
Query 593 TGTTAGGTGTGAGGAGCCATGTCCCCCAATCGAAAGAGCTCAAAGATTTCGGCTTGCGAT 652
|||||||||||||||||||||||||| |||||||||||||| ||||||| | ||| |||
Sbjct 818 TGTTAGGTGTGAGGAGCCATGTCCCCAAATCGAAAGAGCTCGGAGATTTCCGTTTGAGAT 877
Query 653 GGAATAA-AA-AGTTCGAAAAGGAGAATCCAACGATGAGAGATGATCTAACCATTTTTGG 710
|||| || || | || || |||||||||||| |||||||||||||||||| | ||||||
Sbjct 878 GGAA-AAGAACATTT-GAGAAGGAGAATCCATCGATGAGAGATGATCTAAACGTTTTTGC 935
Query 711 ATTACGGGCGTATGATTCAACCACTGCATTGGCCATGGCCGTGGAGAAAACCAACATAA- 769
|||| |||| |||||||||| ||||||||||| | ||| ||||||||| |||||| ||
Sbjct 936 ATTATGGGCATATGATTCAATTACTGCATTGGCTAAGGCTGTGGAGAAAGCCAACACAAA 995
Query 770 GAAGCTT-TCCGTATGATAATGCGAGTGCGTCGTCAAATAACATGACAGATTTGGGGAAC 828
|| |||| | ||||||||||| ||| | | |||||| || | ||||||||||||||||
Sbjct 996 GA-GCTTATG-GTATGATAATGGGAGCACCTTGTCAAAAAATAGGACAGATTTGGGGAAC 1053
Query 829 CTAGGTGTCTCTCGCTACGGTCAAAGTCTTTTAAATGCTCTCTCGGAAATAAGATTCAAT 888
|||| ||||||| ||| |||| ||||||| ||| ||| ||||||| |||||||||||
Sbjct 1054 GTAGGGGTCTCTCTCTATGGTCCAAGTCTTCAAAAGGCTTTCTCGGAGGTAAGATTCAAT 1113
Query 889 GGTTTGGCAGGAGAGTTTAAACTCATAGACAAGCAGCTCGAGTCACCAAAGTTTGAGATC 948
|||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||
Sbjct 1114 GGTTTGGCAGGAGAGTTTAAACTCATAGACGGGCAGCTCCAGTCACCAAAGTTTGAGATC 1173
Query 949 ATAAATTTTGTAGGAAATGAAGAGAGGATTATCGGATTTTGGACACCGAGCA-ATGGACT 1007
||||||||||| |||||||||||||||||||| |||||||||||||| || | |||||||
Sbjct 1174 ATAAATTTTGTCGGAAATGAAGAGAGGATTATTGGATTTTGGACACCAAG-AGATGGACT 1232
Query 1008 TGTGAATGCAA-A--TTCAAACAAAACAAC 1034
|| |||||| | ||||||||||| |||
Sbjct 1233 CATGGATGCAACAAGTTCAAACAAAAAAAC 1262
Score = 571 bits (309), Expect = 9e-162
Identities = 426/482 (88%), Gaps = 9/482 (2%)
Strand=Plus/Plus
Query 1060 ATCTTTGAAGCTGCTCTTAA-GAAGTTGCCATATTCAGTCATTCCACAATAC-TACCGTT 1117
|||||||||||||||||||| ||| |||||||||| ||||||||| | ||| | | |||
Sbjct 1435 ATCTTTGAAGCTGCTCTTAAGGAA-TTGCCATATTTAGTCATTCCTGAGTACGT-CAGTT 1492
Query 1118 TCGAGTCTCCCGATGATCACTACGATGACTTGGTCTA-CAAGCTCGACAACGGGACTTTG 1176
| |||||| || | || ||||| | | |||||||| |||| | | || ||| | |
Sbjct 1493 TTGAGTCT-CC-A-AATAACTACAACAATTTGGTCTACCAAG-TATATGACAAGACATGG 1548
Query 1177 GATGCAGTTGTTGGAGATGTAACTATCACAGCGTACAGGTCTTTGTATGCTGACTTCACG 1236
|||||||||||||||||| |||| ||||||||| |||| |||||||| ||||||||||||
Sbjct 1549 GATGCAGTTGTTGGAGATATAACCATCACAGCGAACAGATCTTTGTACGCTGACTTCACG 1608
Query 1237 TTACCATACACAGAGTCAGGAGTGTCTATGATGGTGCCGGTGAGAGACAATGAGAATAAG 1296
||||| | ||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1609 TTACCGTTCACAGAGTCAGGAGTGTCTATGATGGTGCCGGTGAGAGATAATGAGAATAAG 1668
Query 1297 AACACATGGGTGTTCCTCAAACCTTGGACCTTAGAATTATGGGTCACCACTGGTTGTTTC 1356
||||||||||||||||| ||||||||| |||||| ||||||||||||| |||||||||
Sbjct 1669 GACACATGGGTGTTCCTCGAACCTTGGAGCTTAGAGCTATGGGTCACCACCGGTTGTTTC 1728
Query 1357 TTCGTCCTCATTGGTTTTGTTGTGTGGTTGTTCGAACATAGAGTCAACACAGACTTCCGT 1416
|||||| |||||||||||||||||||| | |||||||| ||||||||||| |||||||||
Sbjct 1729 TTCGTCTTCATTGGTTTTGTTGTGTGGCTATTCGAACACAGAGTCAACACCGACTTCCGT 1788
Query 1417 GGACCGCCTCACCACCAGATCGGCACTAGTTTTTGGTTCTCTTTCTCCACCATGGTTTTT 1476
||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct 1789 GGACCGCCTCAGTACCAGATCGGCACTAGTTTATGGTTCTCCTTCTCCACCATGGTTTTT 1848
Query 1477 GCCCACCGTGAGAAGGTAGTGAGCAACTTAGCAAGGTTTGTGGTGGTTGTGTGGTGCTTT 1536
|||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||| |||
Sbjct 1849 GCCCACCGTGAGAATGTAGTGAGCAATTTAGCAAGGTTTGTGGTGGTTGTCTGGTGTTTT 1908
Query 1537 GT 1538
||
Sbjct 1909 GT 1910
> AT2G29120.1 | Symbols: ATGLR2.7, GLR2.7 | glutamate receptor
2.7 | chr2:12511292-12515895 REVERSE LENGTH=3048
Length=3048
Score = 767 bits (415), Expect = 0.0
Identities = 871/1081 (81%), Gaps = 71/1081 (7%)
Strand=Plus/Plus
Query 12 TGTTCAGGCTTCAGCTGCAGCCTTGGACCTAATCAAGAACGAGCAAGTGAGCGCCATCAT 71
||| ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 266 TGTCCAGGCCTCATCTGCAGCCTTGGACCTAATCAAGAACGAGCAAGTGAGCGCCATCAT 325
Query 72 CGGACCAAGAAACTCTATGCAAGCAGAGTTTATGATCAGACTCGCCAACAAAACTCAAGT 131
||| ||||||| |||||||||||| ||||| ||||| ||||||||| | ||| | |||||
Sbjct 326 CGGGCCAAGAACCTCTATGCAAGCTGAGTTCATGATAAGACTCGCCGATAAATCACAAGT 385
Query 132 ACCAACCATCACATTCTCTGCAACAAGTCCTCTTTTAACATCCATTAAAAGCGATTACTT 191
||| ||||||||||||||||||||| | |||||| | |||||||| || ||| ||||||
Sbjct 386 ACCGACCATCACATTCTCTGCAACATGCCCTCTTCTGACATCCATCAACAGCCCTTACTT 445
Query 192 CGTCCGAGCCACTATCGATGACTCATACCAGGTCAAAGCCATTGCAGCCATTTTTGAATC 251
|||||||||||| |||||||||||| |||||||||||||||||| |||||| | ||||
Sbjct 446 TGTCCGAGCCACTCTCGATGACTCATCCCAGGTCAAAGCCATTGCGGCCATTGTCAAATC 505
Query 252 CTTCGGATGGAGAAGTGTCGTCGCAATTTATGTGGACAACGAGTTAGGTGAAGGAATCAT 311
|||||| ||||||| ||| || || ||||||||||||||||| || || |||||||| ||
Sbjct 506 CTTCGGGTGGAGAAATGTAGTTGCCATTTATGTGGACAACGAATTCGGAGAAGGAAT-AT 564
Query 312 -GCC-TTACTTGTTTGACGCTTTACAAGACGTGCAAG-TC--GATAG--AA--G-TGT-- 359
||| ||| ||| ||||||||||||||||||||||| | | ||| || | |||
Sbjct 565 TGCCATTA-TTGACTGACGCTTTACAAGACGTGCAAGCTTTTG-TAGTCAATAGATGTTT 622
Query 360 GATCTCCCC-GGAGGCTAACGATGACCAGATTCTAAAAGAACTTTATAAGCTCATGACGA 418
|||| || | ||||||||| ||||| || ||||| || || ||||||||||| |||||||
Sbjct 623 GATC-CCTCAGGAGGCTAATGATGATCAAATTCTCAAGGAGCTTTATAAGCTAATGACGA 681
Query 419 GGCAGACTAGGGTTTTCGTTGTCCACATGGCCTC-A-CGTCTTGCTTCACGGATTTTTGA 476
|||||| ||||| ||||||||||||||| || | | | ||| | || || ||||| |
Sbjct 682 TGCAGACGAGGGTATTCGTTGTCCACATG-CCACCAAC-TCTCGGTTTTCGTTTTTTTCA 739
Query 477 GAAAGCTAAAGAGATCGGGATGATGGAGGAAGGGTATGTATGGTTAATGACCA-ATGGAA 535
|||||||| |||||| || |||||||||||||| |||||||||||| |||| | |||||
Sbjct 740 GAAAGCTAGAGAGATTGGTATGATGGAGGAAGGATATGTATGGTTATTGAC-AGATGGAG 798
Query 536 TGACGCATATGATGAGA-CATA-TCAAC-CATGGTCGTAGCTTAAATAATATAG-A-GGG 590
||| | || || ||| | | || | ||| | ||| | ||||| | ||||| | | |||
Sbjct 799 TGATGAATTTGTTGAAATC-TAATGAACGC--GGTAGCAGCTTGGAGAATAT-GCAAGGG 854
Query 591 CGTGTTAGGTGTGAGGAGCCATGTCCCCCAATCGAAAGA-GCTCAAAGATTTCGGCTTGC 649
|| || ||||| ||||||||| ||||| ||||||| || ||||||| ||||| | |||
Sbjct 855 -GTTTTGGGTGTAAGGAGCCATATCCCCAAATCGAA-GAAGCTCAAAAATTTCAGATTGA 912
Query 650 GATGGAATAAAAA-GTT-CG-AA-AAGGAGAATCCAACGATGAGAGATGATCTAACCATT 705
||||| | ||||| ||| | || |||| |||| ||||| ||| ||| ||| |||
Sbjct 913 GATGGGA-AAAAATGTTTCCTAAGAAGGGGAAT-----GATGA-AGA-GATG-AAC-ATT 962
Query 706 TTTG-GATTACGGGCGTATGATTCAACCACTGCATTGGCCATGGCCGTGGAGAAAACCAA 764
|||| | ||| |||| |||||||| | |||||| || || ||||||||||||||||||||
Sbjct 963 TTTGCG-TTAAGGGCATATGATTCGATCACTGCCTTAGCAATGGCCGTGGAGAAAACCAA 1021
Query 765 CATAA-GAAGCTTTCCGTATGATAATGCGAGT-GCGTC-GTCAAATAACATGACAGATTT 821
|||| || |||| | ||||||| || ||| | || || | |||||| | |||| ||||
Sbjct 1022 TATAAAGA-GCTTGCGGTATGATCATCCGA-TCGCTTCAGG-AAATAATAAGACAAATTT 1078
Query 822 GGGGAACCT-AGGTGTCTCTCGCTACGGTCAAAGTCTT-TTAAATGCTCTCTCGGAAA-T 878
||||| | | ||| |||||||||||||||| ||||||| |||| ||||| ||| || |
Sbjct 1079 GGGGA-CATTAGGGGTCTCTCGCTACGGTCCAAGTCTTCTTAAG-GCTCTTTCG-AATGT 1135
Query 879 AAGATTCAATGGTTTGGCAGGAGAGTTTAAACTCAT-AGACAAGCAGCTCGAGTCACCAA 937
||||||||||||||| || ||||||||| | ||||| | || |||||| || ||| ||
Sbjct 1136 AAGATTCAATGGTTTAGCCGGAGAGTTTGAGCTCATTA-ACGGGCAGCTAGAATCATCAG 1194
Query 938 AGTTTGA-GATCATAAATTTTGTAGGAAATGAAGAGAGGATTATCGGATTTTGGACACCG 996
|||||| | |||| ||| || | |||| ||||||||| ||||| ||||| |||| |||
Sbjct 1195 TGTTTGACG-TCATCAATATTATTGGAAGTGAAGAGAGAATTATTGGATTATGGAGACCA 1253
Query 997 AGCAATGGACTTGTGAATGCAAATTCAAACAAA-ACAACTTCA-TTTACAGGGGAGAGGT 1054
||||||||| |||| |||||||| ||||| ||| || || || ||| |||||||||||
Sbjct 1254 AGCAATGGAATTGTTAATGCAAAGTCAAA-AAACACTACGTCGGTTTT-AGGGGAGAGGT 1311
Query 1055 T 1055
|
Sbjct 1312 T 1312
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 112248418620
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5