BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg888185
Length=1737
Score E
Sequences producing significant alignments: (Bits) Value
AT4G39650.1 | Symbols: GGT2 | gamma-glutamyl transpeptidase 2 |... 2590 0.0
AT4G39640.1 | Symbols: GGT1 | gamma-glutamyl transpeptidase 1 |... 1857 0.0
> AT4G39650.1 | Symbols: GGT2 | gamma-glutamyl transpeptidase 2
| chr4:18403560-18406025 FORWARD LENGTH=1890
Length=1890
Score = 2590 bits (1402), Expect = 0.0
Identities = 1617/1723 (94%), Gaps = 6/1723 (0%)
Strand=Plus/Plus
Query 18 GCTTGTTCGTACTGCGACGGTCGCTCTTCTTCTAATCGCGTTTCTGCAAAACGCTAATGC 77
||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||
Sbjct 60 GCTCGTTCGTACTGCGACGATCGCTCTTCTTCTAATCGCGTTTCTGCAAAACGCTAACGC 119
Query 78 TGAGAAAAATCAGCAAAGTATTGTTGCGTATCACGGTGCGGTTGCGACGGACGATGGGCG 137
|| |||||||| |||||||||||||||||||||||||||||||||||| |||||||| ||
Sbjct 120 TGTGAAAAATCTGCAAAGTATTGTTGCGTATCACGGTGCGGTTGCGACAGACGATGGACG 179
Query 138 GTGTTCTGAAATCGGGACGAATGTTCTTCGTCAAGGAGGAAACGCGATTGATGCGTCGGT 197
|||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 180 GTGTTCTGCAATAGGGACGAATGTTCTTCGTCAAGGAGGAAACGCGATTGATGCGTCGGT 239
Query 198 GGCTGCTGCTCTTTGTTTGGGCGTTGTCAGTCCCGCGTCTAGCGGTGTAGGCGGTGGAGC 257
|||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||
Sbjct 240 GGCTGCTGCTCTTTGTTTGGGCGTTGTCAGTCCCGCATCTAGCGGTATAGGCGGTGGAGC 299
Query 258 GTTTATAGTAATCAAACTCGCTAATGGCGA-AGAAATAGCTTATGATTCTAGAGAAACCG 316
||||| | | || || || ||||||||| | ||| | ||||||||||| ||||||||||
Sbjct 300 GTTTACAATGATTAAGCTAGCTAATGGC-ACGGAAGTTGCTTATGATTCCAGAGAAACCG 358
Query 317 CTCCTCTAAGCGCCTCTGAGAATATGTATGGTGGTAATCCTGAGCAAAAGAAGAAAGGAG 376
|||||||||||||| ||||| |||||||||||| ||||||||||| |||||||||||||
Sbjct 359 CTCCTCTAAGCGCCACTGAGGATATGTATGGTGATAATCCTGAGCGAAAGAAGAAAGGAT 418
Query 377 CCTTATCAGTAGCCGTTCCCGGGGAAGTCGCTGGTCTATTCACGGCTTGGACAAAACACG 436
|||| ||||||| |||||||||||||||||| ||||||| ||||||||||||| ||||||
Sbjct 419 CCTTGTCAGTAGGCGTTCCCGGGGAAGTCGCGGGTCTATACACGGCTTGGACACAACACG 478
Query 437 GGAAGTTACCATGGAAGCAGTTAGTGGAACCCGCAGAGAAACTTGCAGCTGAAGGTTTCG 496
|||||||||| |||||||||||||| ||||| || |||||||||||||||||||| |||
Sbjct 479 GGAAGTTACCGTGGAAGCAGTTAGTAGAACCTGCTGAGAAACTTGCAGCTGAAGGATTCA 538
Query 497 AGATTTCAAAATATCTCTATATGCAGATGAACGCGACTAGAAGCGATATCTTAGCAGACA 556
||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||
Sbjct 539 AGATTTCAAAATATCTCTATATGCAGATGAATGCGACTAGAAGCGATATCTTAGCGGACA 598
Query 557 AAGGTCTCTCTGAGCTTTTTGTTTCAAATGGAGAGCTCAAGAAACCAGGGACGATTTTCC 616
|||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| ||
Sbjct 599 AAGGTCTCTCTGAGCTATTTGTTTCAAATGGAGAGCTCAAGAAACCAGGGGCGATTTGCC 658
Query 617 AG-AACCCAAAATTGGCTTTTACACTAAGCCAAATCGCTGAATACGGTCCAAAAGCGTTT 675
| ||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 659 -GTAACCCGAAATTGGCTGATACACTAAGCCAAATCGCTGAATACGGTCCAAAAGCGTTT 717
Query 676 TACAATGGCACGGTTGGGGCTAACCTAGTGAGTGATATACAAAAATCAGGAGGAATAATC 735
|||||||||||||||||| ||||||||||||||||||||||||| | ||||| |||||
Sbjct 718 TACAATGGCACGGTTGGGTTTAACCTAGTGAGTGATATACAAAAAGCCGGAGGGATAATA 777
Query 736 ACTTTGAAAGATTTGCAGAATTACAACGTTAAGGTTAAAGAACCATTATCTGCGGATATT 795
||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||
Sbjct 778 ACTTTGAAAGATTTGCAGAATTACAACGTTAAGGTTAAAGAACCATTATCTACGGAGATT 837
Query 796 CTTGGATACCGATTACTCGGCATGCCTCCTCCTTCATCTGGTGGCCCTGCAATGATGCTT 855
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 838 CTTGGATACCGATTACTCGGCATGCCTCCTCCTTCATCTGGTGGCCCTGCAATGATGCTT 897
Query 856 ATTTTGAACATTCTTGCTCAATATGGTATTCCATATGGTG-TTCACGGCGCCCTCGGTGT 914
|||||||||||||||||||||||||||||||||| |||| ||| |||| ||||||||||
Sbjct 898 ATTTTGAACATTCTTGCTCAATATGGTATTCCATCGGGTGTTTC-CGGCCCCCTCGGTGT 956
Query 915 TCATCGACTAGTTGAGGCTCTCAAACATGCATTCGCGGTAAGAATGAACCTCGGGGATCC 974
|||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct 957 TCATCGACTAGTTGAGGCTCTCAAACATGCATTCGCAGTTAGAATGAACCTCGGGGATCC 1016
Query 975 AGATTTCGTCCCTGATGTTACCAAGGTTGTTTCAGATATGTTGTCTCCAAAGTTTGCGCA 1034
|||||| |||||||| ||||| || |||||| |||||||||| |||||||||||||| ||
Sbjct 1017 AGATTTTGTCCCTGAAGTTACTAATGTTGTTGCAGATATGTTATCTCCAAAGTTTGCACA 1076
Query 1035 AGACTTGAAGAGCAAGATAAACGATGAGAAGACCTTTGGTCCAAAATTTTACGGTGGCAA 1094
|||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct 1077 AGACTTGAAGAGCAAGATAAACGATGAGAAGACCTTTGATCCAAAATATTACGGTGGCAA 1136
Query 1095 ATGGAATCAGATAAAGGATCATGGGACGAGCCATTTATCGATAATAGATTCGGAGAGAAA 1154
|||| |||||| |||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1137 ATGGGGTCAGATCAAGGATCATGGGACGAGCCATTTATCGATAATAGATTCTGAGAGAAA 1196
Query 1155 TGCTGTTTCAATGACTACTACAATCAACGGATACTTTGGGGCAATAATGCTGTCTCCGAG 1214
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1197 TGCTGTTTCAATGACTAGTACAATCAACGGATACTTTGGGGCAATAATGCTGTCTCCGAG 1256
Query 1215 CACTGGAATTGTTCTAAACAACGAAATGGACGATTTCTCGATCCCAATGAAATCCGGAGG 1274
||| ||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct 1257 CACCGGAATCGTTCTAAACAACGAAATGGACGATTTCTCGATCCCGACGAAATCCGGAGG 1316
Query 1275 TGGCCCAGATGTGCCGCCACCGGCACCAGCTAACTTCATCCGTCCGGGGAAACGACCTTT 1334
|| |||||||||||| ||||| ||||| |||||||||||||| |||||||||||||||||
Sbjct 1317 TGACCCAGATGTGCCCCCACCAGCACCGGCTAACTTCATCCGACCGGGGAAACGACCTTT 1376
Query 1335 GTCATCTATGACTCCCACCATTGTACTCAAGGACGGTAAAGTGAAAGCAGCACTGGGTGC 1394
||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1377 GTCCTCTATGACTCCCACCATTGTACTCAAGGACGGTAAAGTGAAAGCAGCATTGGGTGC 1436
Query 1395 GAGCGGAGGAATGTTCATCATCGCCGGTACAACAGAAGTTTACTTGAATCATTTCTTCCT 1454
||| |||||||||| ||||||||||||||||||| |||||||||| ||||||||||||||
Sbjct 1437 GAGTGGAGGAATGTACATCATCGCCGGTACAACACAAGTTTACTTAAATCATTTCTTCCT 1496
Query 1455 CAACATGGATCCTCTCTCTTCCGTTGTTGCTCCAAGAATCTACCACCAGCTGATACCGAA 1514
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1497 CAACATGGATCCTCTCTCTTCCGTTGTTGCTCCAAGAATCTACCACCAGCTGATACCGAA 1556
Query 1515 CAAAGCTTCGTATGAGAATTGGACGACAGTGTATAATGACCATTTTGAGATTCCTGAAGA 1574
||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||
Sbjct 1557 CAAAGCTTCGTATGAGAATTGGACGACAGTGTATAGTGACCATTTCGAGATTCCTGAAGA 1616
Query 1575 GACAAGACTTGTGTTGGAGAAGAAAGGCCATGTCCTAATGCCGATTGCCGGAGGGACGAT 1634
|| |||||||||||||||||||||||| || ||||||| |||||| ||||||||||||||
Sbjct 1617 GATAAGACTTGTGTTGGAGAAGAAAGGTCAAGTCCTAACGCCGATCGCCGGAGGGACGAT 1676
Query 1635 TTCTCAGTTCATAGTTGAAGAATCCGATGGAAGCTCCGGTGGAATGAGTAAGCTTGTGGC 1694
||||||| ||||||||||| |||||||||||| ||||||||||| ||||||||||||||
Sbjct 1677 TTCTCAGCTCATAGTTGAACAATCCGATGGAAAATCCGGTGGAATTAGTAAGCTTGTGGC 1736
Query 1695 GGTCAGTGATCCAAGGAAAGGAGGGTTCCCTTCAGGATATTGA 1737
||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1737 GGTTAGTGATCCAAGGAAAGGAGGGTTCCCTTCAGGATATTGA 1779
> AT4G39640.1 | Symbols: GGT1 | gamma-glutamyl transpeptidase 1
| chr4:18399955-18402963 FORWARD LENGTH=1969
Length=1969
Score = 1857 bits (1005), Expect = 0.0
Identities = 1513/1754 (86%), Gaps = 52/1754 (3%)
Strand=Plus/Plus
Query 7 TTAGCAATGCT-GCTTGTTCGTACTGCGACGGTCGCTCTTCTTCTAATCGCGTTTCTGCA 65
||||||||| | ||| ||||| || | |||| ||| |||| || ||||||||||||||||
Sbjct 143 TTAGCAATG-TCGCTGGTTCGAACAGTGACGATCGTTCTTTTTATAATCGCGTTTCTGCA 201
Query 66 AAACGCTAATGCTGAGAAAA-ATCAGCAAAGTATTGTTGCGTATCACGGTGCGGTTGCGA 124
||||||| ||| |||||| | ||||||||||||||| || || ||||||||||||||
Sbjct 202 AAACGCTGCGGCTCAGAAAAGA-CAGCAAAGTATTGTTAAGTCTCGCGGTGCGGTTGCGA 260
Query 125 CGGACGATGGGCGGTGTTCTGAAATCGGGACGAATGTTCTTCGTCAAGGAGGAAACGCGA 184
| || ||||| |||||||||| ||||||| | |||||||||| |||||||||||||||
Sbjct 261 CAGATGATGGACGGTGTTCTGTTATCGGGATGCGTGTTCTTCGTGAAGGAGGAAACGCGA 320
Query 185 TTGATGCGTCGGTGGCTGCTGCTCTTTGTTTGGGCGTTGTCAGTCCCGCGTCTAGCGGTG 244
|||||||||| |||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct 321 TTGATGCGTCTGTGGCTGCTGCTCTGTGTTTGGGCGTTGTAAGTCCCGCGTCTAGCGGTA 380
Query 245 TAGGCGGTGGAGCGTTTATAGTAATCAA-ACTCGCTAATGGCG-AAGAAATAGCTTATGA 302
|||||||||||||||||| ||| | || | | ||| ||| | ||||||| ||||||||
Sbjct 381 TAGGCGGTGGAGCGTTTACAGTGGTTAAGA-TAGCTGGTGG-GAAAGAAATTGCTTATGA 438
Query 303 TTCTAGAGAAACCGCTCCTCTAAGCGCCTCTGAGAATATGTATGGTGGTAATCCTGAGCA 362
|||||||||||||||||||||||| ||| |||||||||||||||| |||||| ||| |
Sbjct 439 TTCTAGAGAAACCGCTCCTCTAAGAGCCACTGAGAATATGTATGGAGGTAATGTTGACCT 498
Query 363 AAAGAAGAAAGGAGCCTTATCAGTAGCCGTTCCCGGGGAAGTCGCTGGTCTATTCACGGC 422
|||||||||||||||||||||||||| ||||||||||||||| || ||||||||||||||
Sbjct 499 AAAGAAGAAAGGAGCCTTATCAGTAGGCGTTCCCGGGGAAGTTGCAGGTCTATTCACGGC 558
Query 423 TTGGACAA-AACACGGGAAGTTACCATGGAAGCAGTTAGTGGAAC-CC-GCAGAGAAACT 479
||||| || |||| |||||| |||| ||||||| |||||| | || || |||||||||||
Sbjct 559 TTGGA-AACAACATGGGAAGCTACCGTGGAAGCGGTTAGT-G-ACTCCTGCAGAGAAACT 615
Query 480 TGCAGCTGAAGGTTTCGAGATTTCAAAATATCTCTATATGCAGATGAACGCGACTAGAAG 539
|||| || || ||| ||||||| || ||||| ||||||||||||||||||||||||||
Sbjct 616 TGCA---GAGGGATTCAAGATTTCCAAGTATCTTTATATGCAGATGAACGCGACTAGAAG 672
Query 540 CGATATCTTAGCAGACAAAGGTCTCTCTGAGCTTTTTGTTTCAAATGGAGAGCTCAAGAA 599
|||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct 673 CGATATCTTAGCAGACAAAGGTCTCTCTGACCTATTTGTTTCAAATGGAGAGCTCAAGAA 732
Query 600 ACCAGGGACGATTTTCCAGAACCCAAAATTGGCTTTTACACT--AAGCCAAATCGCTGAA 657
|||||||||||||| ||| ||||||||||||||||| || || |||| || | | ||
Sbjct 733 ACCAGGGACGATTTGCCATAACCCAAAATTGGCTTTAAC-CTTGAAGCTAATTGGA-GAG 790
Query 658 TACGGTCCAAAAGCGTTTTACAATGGCACGGTTGGGGCTAACCTAGTGAGTGATATACAA 717
|||||||||||||| |||||||||||||| ||||||| |||||||| ||| ||||| |||
Sbjct 791 TACGGTCCAAAAGCATTTTACAATGGCACAGTTGGGGTTAACCTAGCGAGAGATAT-CAA 849
Query 718 AAA-TCAGGAGGAATAATCACTTTGAAAGATTTGCAGAA-TTACA-ACGTTAAGGTTAAA 774
||| || ||||||||||| |||||||||||| |||| || ||| | | |||||| |||||
Sbjct 850 AAAATCTGGAGGAATAATAACTTTGAAAGATCTGCA-AAGTTATAGA-GTTAAGATTAAA 907
Query 775 GAACCATTATCTGCGGATATTCTTGGATACCGATTACTCGGCATGCCTCCTCCTTCATCT 834
||||| || ||||| || ||||||||||| || | || || ||||||||||||||||||
Sbjct 908 GAACCGTTGTCTGCAGACATTCTTGGATATAGAGTCCTTGGTATGCCTCCTCCTTCATCT 967
Query 835 GGTGGCCCTGCAATGATGCTTATTTTGAACATTCTTGCTCAATATGGTATTCCAT-ATGG 893
|||||| |||||||||||||| |||||||||||||| |||||||||| ||||||| | ||
Sbjct 968 GGTGGCGCTGCAATGATGCTTGTTTTGAACATTCTTTCTCAATATGGGATTCCATCA-GG 1026
Query 894 TGTT-CACGGCGCC-CTCGGTGTTCATCGACTAGTTGAGGCTCTCAAACATGCATTCGCG 951
|||| || ||| || |||||||||||||||||| | |||||||| ||||||||||||||
Sbjct 1027 TGTTTCA-GGC-CCTCTCGGTGTTCATCGACTAATCGAGGCTCTGAAACATGCATTCGCA 1084
Query 952 GTAAGAATGAACCTCGGGGATCCAGATTTCGTCCCTGATGTTACCAAGGTTGTTTCAGAT 1011
|| ||||||||||||||||||||||||||| | ||||||||||||||||||||| |||
Sbjct 1085 GTTAGAATGAACCTCGGGGATCCAGATTTCA-C--TGATGTTACCAAGGTTGTTTCGGAT 1141
Query 1012 ATGTTGTCTCCAAAGTTTGCGCAAGACTTGAAGAGCAAGATAAACGATGAGAAGACCTTT 1071
|||||||| ||||||||||| ||||||||||||||||||||||||| | || || |||
Sbjct 1142 ATGTTGTCGCCAAAGTTTGCAAAAGACTTGAAGAGCAAGATAAACGACCAAAAAACTTTT 1201
Query 1072 GGTCCAAAATTTTACGGTGGCAAATGGAATCAGATAAAGGATCATGGGACGAGCCATTTA 1131
| |||||||| |||||| |||| ||||||||||| | || || ||||| || ||||||
Sbjct 1202 GATCCAAAATATTACGGGGGCATGTGGAATCAGATCGACGACCACGGGACAAGTCATTTA 1261
Query 1132 TCGATAATAGATTCG-GAGAGAAATGCTGTTTCAATGACTACTACAATCAACGGATACTT 1190
||||| ||||| || ||||| || ||||| || ||||||| |||||| || || |||||
Sbjct 1262 TCGATCATAGAC-CGCGAGAGGAACGCTGTGTCTATGACTAGTACAATAAATGGTTACTT 1320
Query 1191 TGGGGCAATAATGCTGTCTCCGAGCACTGGAATTGTTCTAAACAACGAAATGGACGATTT 1250
||||||| | ||||| ||||||||||| ||||| ||||| ||||||||||||||||||||
Sbjct 1321 TGGGGCATTGATGCTATCTCCGAGCACAGGAATAGTTCTGAACAACGAAATGGACGATTT 1380
Query 1251 CTCGATCCCAATGAAATCCGGA-GGTGGCCCAGATGTGCCGCCACCGGCACCAGCTAACT 1309
||| ||||| |||||||| | ||| | |||||| || ||||| |||||||||||||
Sbjct 1381 CTCAATCCCTATGAAATCTA-ACGGTAACTTAGATGTTCCACCACCAGCACCAGCTAACT 1439
Query 1310 TCATCCGTCCGGGGAAACGACCTTTGTCATCTATGACTCCCACCATTGTACTCAAGGACG 1369
|||||||||| || |||||||||||||| |||||| | ||||||||||||||||||||||
Sbjct 1440 TCATCCGTCCTGGAAAACGACCTTTGTCCTCTATGTCACCCACCATTGTACTCAAGGACG 1499
Query 1370 GTAAAGTGAAAGCAGCACTGGGTGCGAGCGGAGGAATGTTCATCATCGCCGGTACAACAG 1429
||||||||||||| || ||||||||||||||||| ||| || ||||| ||||| |
Sbjct 1500 GTAAAGTGAAAGCCGCTGTGGGTGCGAGCGGAGGAGCCAACATTATTGCCGGGACAACGG 1559
Query 1430 AAGTTTACTTGAATCATTTCTTCCTCAACATGGATCCTCTCTCTTCCGTTGTT-GCTCCA 1488
||||||||||||||||||| |||||||| ||||||||||| |||||||| || ||||||
Sbjct 1560 AAGTTTACTTGAATCATTTTTTCCTCAAGATGGATCCTCTTTCTTCCGTC-TTAGCTCCA 1618
Query 1489 AGAATCTACCACCAGCTGATACCGAACAAAGCTTCGTATGAGAATTGGACGACAGTGTAT 1548
||||||||||| ||||||||||| |||| ||||||||| ||||| ||||| ||||| | |
Sbjct 1619 AGAATCTACCATCAGCTGATACCAAACAGAGCTTCGTACGAGAACTGGACAACAGTAT-T 1677
Query 1549 -AATGACCATTTTGAGATTCCTGAAG-AGACAAGACTTGTGTTGGAGAAGAAAGGCCATG 1606
||||| ||||| ||||||||| ||| | |||||| ||||||||||||||||||| ||||
Sbjct 1678 CAATGATCATTTCGAGATTCCTAAAGCA-ACAAGAGTTGTGTTGGAGAAGAAAGGTCATG 1736
Query 1607 TCCTAA-TGCCGATTGCCGGAGGGACGATTTCTCAGTTCATAGTTGAAGAATCCGATG-G 1664
||||| | || |||||||||||||||||| |||||||||||||| ||||||||| || |
Sbjct 1737 TCCTATCT-CCTATTGCCGGAGGGACGATTGCTCAGTTCATAGTTCAAGAATCCGGTGAG 1795
Query 1665 AAGCTCCGGTGGAATGA-GTAAGCTTGTGGCGGTCAGTGATCCAAGGAAAGGAGGGTTCC 1723
|| ||||||||||| || || |||||||||| || |||||||| | |||||||||||||
Sbjct 1796 AA-CTCCGGTGGAA-GAAGTGAGCTTGTGGCAGTTAGTGATCCTCGAAAAGGAGGGTTCC 1853
Query 1724 CTTCAGGATATTGA 1737
||||||||||||||
Sbjct 1854 CTTCAGGATATTGA 1867
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 85893132495
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5