BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg888382 Length=396 Score E Sequences producing significant alignments: (Bits) Value AT4G36820.1 | Symbols: | Protein of unknown function (DUF607) ... 274 5e-73 AT4G39790.1 | Symbols: | Protein of unknown function (DUF630 a... 185 2e-46 > AT4G36820.1 | Symbols: | Protein of unknown function (DUF607) | chr4:17346805-17347994 FORWARD LENGTH=1101 Length=1101 Score = 274 bits (148), Expect = 5e-73 Identities = 219/250 (88%), Gaps = 18/250 (7%) Strand=Plus/Plus Query 3 GGCGTCGCAAAGTCTGATGAACTGTCGTACTTCG---TCTTCTTCGTTAGCCCTGCGAAC 59 ||||||||||||||| |||||||||||||||||| ||||||||||||||| ||||||| Sbjct 138 GGCGTCGCAAAGTCTCATGAACTGTCGTACTTCGTCTTCTTCTTCGTTAGCCATGCGAAC 197 Query 60 TAGGGTTCCTAAAGATATAGGAGAAGCCACGATTGATCCAGAGCCTGGGGATTTGACGAC 119 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 198 TAGGGTTCCTAAAGATATAGGAGAAGCCACGATTGATCCAGAGCCTGGAGATTTGACGAT 257 Query 120 TTCTCGGAGGTTTTTGCATAAAATCTCCATGAATGGGATTGATATGACTTCGAAGA-GT- 177 ||||| |||||||||| ||||| ||||||||||||||||||||| ||||||||||| || Sbjct 258 TTCTCAGAGGTTTTTGAATAAATTCTCCATGAATGGGATTGATACGACTTCGAAGATGTC 317 Query 178 T-T-G---AT-G-C--A-G-A-A-GCTTCGAGAAATGGATGTGAACAAGGATAGGATTCG 224 | | | | | | | | | | |||| |||||||||| ||||||||||| ||||||| Sbjct 318 TATTGGGGAGAGTCTGATGGAGAAGCTTAAAGAAATGGATATGAACAAGGATCGGATTCG 377 Query 225 ATTAGACGGA 234 |||||||||| Sbjct 378 ATTAGACGGA 387 > AT4G39790.1 | Symbols: | Protein of unknown function (DUF630 and DUF632) | chr4:18462190-18464824 REVERSE LENGTH=2340 Length=2340 Score = 185 bits (100), Expect = 2e-46 Identities = 121/131 (92%), Gaps = 2/131 (2%) Strand=Plus/Plus Query 243 TAAAACAAGATCAGCTTCTAAAGATCTTCATTCAAGAATCAGAGTCGCGATTCAATCTGT 302 |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 1506 TAAAACAAGAGCAGCTGCTAAAGATCTTCATTCAAGAATCAGAGTCGCGATTCAATCTGT 1565 Query 303 TGATTCGATTTCAAAGCTGG-TTGAGAGATTCAGAGATGATGAGCTCGAGCCACAGCTAT 361 ||| ||||||||||||| || |||||||| ||||||| ||||||||| | |||||||| | Sbjct 1566 TGAATCGATTTCAAAGC-GGATTGAGAGAATCAGAGACGATGAGCTCCACCCACAGCTCT 1624 Query 362 TAGAGTTTCTT 372 ||||||||||| Sbjct 1625 TAGAGTTTCTT 1635 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 18699602628 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5