BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg888428
Length=1896
Score E
Sequences producing significant alignments: (Bits) Value
AT4G36290.1 | Symbols: CRT1 | compromised recognition of TCV 1 ... 2832 0.0
AT4G36280.1 | Symbols: | Histidine kinase-, DNA gyrase B-, and... 2115 0.0
AT4G36270.1 | Symbols: | ATP binding | chr4:17161024-17165241 ... 726 0.0
> AT4G36290.1 | Symbols: CRT1 | compromised recognition of TCV
1 | chr4:17169464-17173215 REVERSE LENGTH=2141
Length=2141
Score = 2832 bits (1533), Expect = 0.0
Identities = 1787/1910 (94%), Gaps = 16/1910 (1%)
Strand=Plus/Plus
Query 1 ATGGCG-AAAA--ACACAGTCGCCGATATCGT-AAT-TC-TC---GACAGTGACAGTGAC 51
|||||| |||| |||||||||||||| |||| ||| || | |||||||||||||||
Sbjct 29 ATGGCGAAAAATTACACAGTCGCCGATGTCGTAAATATCGACAGTGACAGTGACAGTGAC 88
Query 52 GACGACGTCGGAGGAGGAATAGGAATGGGT-CGAAGCTTGACATCTCTTATGGAGAATCA 110
|||||| |||||||| ||||||||||| | || |||||| ||||||| || ||||||||
Sbjct 89 GACGACAACGGAGGAGTAATAGGAATGGTTCCG-AGCTTGGCATCTCTAATAGAGAATCA 147
Query 111 GCAAGTTTCGAACGCTGATGCTGCGACGGTGGCTCCTCGAGAAACCCTAGAATGTCGGAG 170
| ||||||||| ||||||||||||||||||||||||||||||||||||||| || || ||
Sbjct 148 GAAAGTTTCGATCGCTGATGCTGCGACGGTGGCTCCTCGAGAAACCCTAGAGTGCCGAAG 207
Query 171 TTTCTGGAAAGCCGGCGAAAACTTTGTGATCCCTTCCGGTGTTACTCCAACTGCTC-CAG 229
|||||||||||||||||||||||||||||||||||| ||||||||| |||||| | ||
Sbjct 208 TTTCTGGAAAGCCGGCGAAAACTTTGTGATCCCTTCAAGTGTTACTCTAACTGC-CATAG 266
Query 230 GTATGGTTGAGCATGCTCGTGTTCATCCAAAGTTTCTTCACTCGAATGCTACTTCACATA 289
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 267 GTATGGTTGAGCATGCTCGTGTTCATCCAAAGTTTCTTCACTCGAATGCTACTTCACATA 326
Query 290 AATGGGCTTTTGGAGCAATCGCAGAGCTACTTGACAATGCGGTTGACGAGGTCCAAAACG 349
|||||||||||||||||||||| ||||||||||||||||||||||| ||| | |||||||
Sbjct 327 AATGGGCTTTTGGAGCAATCGCCGAGCTACTTGACAATGCGGTTGATGAGATACAAAACG 386
Query 350 GAGCCACCTTTGTCAAGATTGATAAGATCAATATTGTTAAAGATAATACCCCTGCTTTAG 409
| || ||| |||||||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct 387 GTGCTACCGTTGTCAAGATTGATAAGATCAATATTGTTAAAGATAATACACCTGCCTTAG 446
Query 410 TTTTCCAAGATAATGGTGGTGGGATGGATCCCAATGGGATCAGAAAATGCATGAGCTTAG 469
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 447 TTTTCCAAGATAATGGTGGTGGGATGGATCCTAATGGGATCAGAAAATGCATGAGCTTAG 506
Query 470 GCTACTCGTCAAAGAAGTCTAATACGACGATTGGACAGTATGGAAATGGTTTTAAGACGA 529
|||||||||||||||||||||||||||| |||||||| |||||||||||||| ||||| |
Sbjct 507 GCTACTCGTCAAAGAAGTCTAATACGACAATTGGACAATATGGAAATGGTTTCAAGACAA 566
Query 530 GTACCATGAGACTTGGAGCTGATGCCATCGTGTTTAGTCGCTCAACTCGTGGAGGCAAAT 589
|||| ||||||||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct 567 GTACAATGAGACTTGGAGCTGATGCCATGGTTTTTAGTCGCTCAACTCGTGGAGGCAAAT 626
Query 590 CTACACAGAGCATTGGTCTTCTGTCTTACACATTCCTTAGGAAAACTGGTCAGGATGATG 649
||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||
Sbjct 627 CTACACAGAGCATTGGTCTTCTGTCCTATACATTCCTTAGGAAAACTGGTCAGGATGATG 686
Query 650 TGATCGTTCCTATGATTGATTTCGATATATCCAGTGTTAGGCCCCAACCAATTATTTATG 709
|||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||
Sbjct 687 TGATCGTTCCTATGATTGATTTCGATATATCCAGTGATAGCCCCCAACCAATTATTTATG 746
Query 710 GGTCTCCCGGAGATTGGTCTACCAACCTTAACATTCTTCTCAAATGGTCCCCGTTTCCAA 769
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 747 GGTCTCCCGGAGATTGGTCTACCAACCTTAACATTCTTCTCAAATGGTCCCCGTTTTCAA 806
Query 770 CTATGGACGAACTTTTGCAGCAGTTCGAGGATATTGGAACTCACGGAACAAAAGTAATTA 829
| |||| ||||||||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct 807 CAATGGTCGAACTTTTGCAGCAGTTCGAGGATATTGGAACACATGGAACAAAAGTAATTA 866
Query 830 TATACAACTTGTGGCTTAATGATGAAGGAATCTATGAATTGAGTTTTGACGACGATGATG 889
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 867 TATACAACTTGTGGCTTAATGATGAAGGAATCTATGAGCTGAGTTTTGACGACGATGATG 926
Query 890 AGGATATACGGCTCCGAGATGAGAATGCCCAGGATGGGAAACGGTTGTACGCTAAAACAT 949
||||||||||||||||||||| ||||||||||| |||||||||||| ||||||||||||
Sbjct 927 TGGATATACGGCTCCGAGATGAAAATGCCCAGGACGGGAAACGGTTGCACGCTAAAACAT 986
Query 950 TGGAACTAAGATCTCATATTTCATACCGCTATCGACATTCGCTAAGGGCCTACATTTCCA 1009
||||| |||||||||||||||| ||||||||||||||||| |||||||| ||||||||||
Sbjct 987 TGGAAGTAAGATCTCATATTTCGTACCGCTATCGACATTCTCTAAGGGCTTACATTTCCA 1046
Query 1010 TGCTATATCTCAAGAAGTTCAAAAACTTCAAAATTATTCTTCGGGGAATCCCTGTGGAGC 1069
|| |||||||||| ||||||||||||||||||||||||||||||||| || |||||| ||
Sbjct 1047 TGTTATATCTCAAAAAGTTCAAAAACTTCAAAATTATTCTTCGGGGAGTCTCTGTGGCGC 1106
Query 1070 AATTCAACATTGCTGATGAATTCAGACATCCTGAGATAATAATGTACAAACCCCAAGCAG 1129
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1107 AATTCAACATTGCTGATGAATTCAGACATCCTGAGACAATAATGTACAAACCCCAAGCAG 1166
Query 1130 CTGCAATGGAATATGCTGCCACTGGAATTAAAGTTGGATTCATCAAGGAGGCGCCTAAAC 1189
||||| |||| ||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1167 CTGCAGTGGATTATGCTGCCACTGGAATTAAAGTTGGATTCATCAAGGAGGCCCCTAAAC 1226
Query 1190 TTCCAATTTGTGGTTTCAATGTCTATCACAAAAACCGTCTCATCCGGCCATTCTGGAAGG 1249
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1227 TTCCAATTTGTGGTTTCAATGTCTATCACAAAAACCGTCTCATCCGGCCATTCTGGAAGG 1286
Query 1250 TCGTTCTGGAAGGATCAACGAGAGGCAATGGTGTTGTGGGAGTTCTTGAAGCAAACTTCA 1309
||||||||||||| ||||||||||||||||||||| ||||||||||||| ||||||||||
Sbjct 1287 TCGTTCTGGAAGGGTCAACGAGAGGCAATGGTGTTATGGGAGTTCTTGAGGCAAACTTCA 1346
Query 1310 TAGAACCAGCCCACGATAAGCAAGATTTTGAGAGATCTTCTCTATTTCTGCGGCTGGAGG 1369
|||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1347 TAGAACCAGCCCACGACAAGCAAGATTTTGAGAGGTCTTCTCTATTTCTGCGGCTGGAGG 1406
Query 1370 GGAGGCTGAAAAGGATTATCTCTGATTACTGGCAAAGCCACTGCCACGTTTTCGGATACC 1429
||||||||||||||| | ||||||||||||||||| ||||| ||| ||||||||||||
Sbjct 1407 CGAGGCTGAAAAGGATAACCTCTGATTACTGGCAAAATCACTGTCACATTTTCGGATACC 1466
Query 1430 AAACTGGTCAAATCCCTGCAGATAGGTCGAAAAGGATAGCAATACCTGATCAACCGCCTA 1489
|||||| ||||||||||||||||| ||||||||||| || ||||||||||||||||||||
Sbjct 1467 AAACTGCTCAAATCCCTGCAGATAAGTCGAAAAGGACAGTAATACCTGATCAACCGCCTA 1526
Query 1490 CTGTCAGTACATTCAATCCTTCGCCTTTGCCTTCTGATAAAATTAGTCAAGGCGGTCCTA 1549
|||||| ||||| |||||||||||||||||||||||||| ||| ||||| || |||||||
Sbjct 1527 CTGTCAATACATACAATCCTTCGCCTTTGCCTTCTGATAGAATCAGTCATGGTGGTCCTA 1586
Query 1550 TAATACGTGAAATCAATCTTAGTAACGCCACTTCAAGCCGTACAGTTGCTGTTGCAGCAC 1609
|||||||||||||||||||||||||||||||||||||||| |||| ||||||||| || |
Sbjct 1587 TAATACGTGAAATCAATCTTAGTAACGCCACTTCAAGCCGAACAGCTGCTGTTGCCGCGC 1646
Query 1610 CGCATTTGAGAAATTCCACGGGTTTAAGAAGTAACTTCCAACCCGTGCAGCTCAACCCAC 1669
| ||||||||||||| ||| |||||||||| |||||||||||||||||||||||||||||
Sbjct 1647 CACATTTGAGAAATTACACAGGTTTAAGAAATAACTTCCAACCCGTGCAGCTCAACCCAC 1706
Query 1670 AACC---TGCAGCTGCCGATACTGGAAACAACATCGTTGGCAAGTCAGCTGATGAGATAA 1726
|||| |||||||| |||||||||||||||| |||||||||||| ||| | |||||||
Sbjct 1707 AACCACCTGCAGCTGGCGATACTGGAAACAACCTCGTTGGCAAGTTAGCGGCTGAGATAC 1766
Query 1727 GGGAAGAGAACATACAACTCTTCATGAGGTGCGAGGAATATATAAAGAAAGAGAATGAAA 1786
| ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1767 GCGAAGAGAACTTACAACTCTTCATGAGGTGCGAGGAATATGTAAAGAAAGAGAATGAAG 1826
Query 1787 TAGAACAGACGGTAAAGAGCTTAGAAAAGGAACTGGAAGAAGTTAAAAGTAAATGTGCAC 1846
|||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||
Sbjct 1827 TAGAACAGACGGTAAAGAGCTTAGAAAAAGAACTGGAAGAAATTAAAAGTAAATGTGCAC 1886
Query 1847 AACTTGCTTTGCTTGTGGACGCTAAGAAGAAGGAGATGCAACAAGTTTAG 1896
|||||||| |||||||||| ||||||||||||||||||||||||||||||
Sbjct 1887 AACTTGCTCTGCTTGTGGATGCTAAGAAGAAGGAGATGCAACAAGTTTAG 1936
> AT4G36280.1 | Symbols: | Histidine kinase-, DNA gyrase B-, and
HSP90-like ATPase family protein | chr4:17165331-17169375
REVERSE LENGTH=2161
Length=2161
Score = 2115 bits (1145), Expect = 0.0
Identities = 1596/1812 (88%), Gaps = 37/1812 (2%)
Strand=Plus/Plus
Query 103 GAGAATCAGCAAGTTTCGAA-CGCTGATGCTGCGACGGTGGCTCCTCGAGAAACCCTAGA 161
||||||||||||| | | || ||||| ||||||||| ||||||||||||| ||| ||||
Sbjct 187 GAGAATCAGCAAG-TAC-AATCGCTGGTGCTGCGACAATGGCTCCTCGAGAGACCTTAGA 244
Query 162 ATGTCGGAG-TTTCTGGAAAGCCGGCGAAAACTTTGTGATCCCTTCCGGTGTTACTCCAA 220
||| ||||| ||| ||||| || || || |||||||||| || || ||| ||||| |
Sbjct 245 ATGCCGGAGCTTT-TGGAAGGCGGGAGATTACTTTGTGATACCGAACGTTGTGACTCCTA 303
Query 221 CTGCTCCAGGTATGGTTGAGCATGCTCGTGTTCATCCAAAGTTTCTTCACTCGAATGCTA 280
|||||||||||||| ||||||||||||| |||||||| | ||||||||||||||||||||
Sbjct 304 CTGCTCCAGGTATGCTTGAGCATGCTCGAGTTCATCCCAGGTTTCTTCACTCGAATGCTA 363
Query 281 CTTCACATAAATGGGCTTTTGGAGCAATCGCAGAGCTACTTGACAATGCGGTTGACGAGG 340
| ||||| ||||||||||||||||||||||| ||||||||||||||||| |||||||||
Sbjct 364 CCTCACACAAATGGGCTTTTGGAGCAATCGCTGAGCTACTTGACAATGCTGTTGACGAGA 423
Query 341 TCCAAAACGGAGCCACCTTTGTCAAGATTGATAAGATCAATATTGTTAAAGATAATACCC 400
| ||||| || || || ||||| ||||||||||||||||||||||| ||||||||| |||
Sbjct 424 TACAAAATGGTGCTACGTTTGTTAAGATTGATAAGATCAATATTGTCAAAGATAATTCCC 483
Query 401 CTGCTTTAGTTTTCCAAGATAATGGTGGTGGGATGGATCCCAATGGGATCAGAAAATGCA 460
| |||||||||||||||||| |||||||||||||||||||| |||| ||||||||||||
Sbjct 484 CAGCTTTAGTTTTCCAAGATGATGGTGGTGGGATGGATCCCGCTGGGCTCAGAAAATGCA 543
Query 461 TGAGCTTAGGCTACTCGTCAAAGAAGTCTAATACGACGATTGGACAGTATGGAAATGGTT 520
|||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||
Sbjct 544 TGAGCTTAGGCTACTCATCAAAGAAGTCTAATACAACGATTGGACAGTATGGAAATGGTT 603
Query 521 TTAAGACGAGTACCATGAGACTTGGAGCTGATGCCATCGTGTTTAGTCGCTCAACTCGTG 580
| ||||| |||||||||||||||||||||||||| ||||| ||||||||||| |||||||
Sbjct 604 TCAAGACAAGTACCATGAGACTTGGAGCTGATGCTATCGTTTTTAGTCGCTCCACTCGTG 663
Query 581 GAGGCAAATCTACACAGAGCATTGGTC-TTCTGTCTTACACATTCCTTAGGAAAACTGGT 639
|||||| |||||| |||||| |||| | ||||||| |||||||||||||| |||||||||
Sbjct 664 GAGGCACATCTACTCAGAGCGTTGG-CATTCTGTCATACACATTCCTTAGAAAAACTGGT 722
Query 640 CAGGATGATGTGATC-GTTCCTATGATTGAT-TTCGATATATCC-AGTGTTAG-G-CCCC 694
||||||||||| | | ||||||||||||||| || ||||||||| || | || | || |
Sbjct 723 CAGGATGATGTCA-CTGTTCCTATGATTGATATT-GATATATCCAAG-G--AGCGACCAC 777
Query 695 AACCAATTATTTATGGGTCTCCCGGAGATTGGTCTACCAACCTT-AACATTCTTCTCAAA 753
|||||||||| ||||| ||||| | ||||||| || |||||||| || ||||| ||||||
Sbjct 778 AACCAATTATCTATGGATCTCCAGAAGATTGGGCTGCCAACCTTGAA-ATTCTACTCAAA 836
Query 754 TGGTCCCCGTTTCCAACTA-TGGACGAACTTTTGCAGCAGTTCGAGGATATTGGAACTCA 812
||||| |||||| | || | ||||||||||||||||||||||||||| ||||||||||
Sbjct 837 TGGTCTCCGTTTTCTAC-AGAGGACGAACTTTTGCAGCAGTTCGAGGACGTTGGAACTCA 895
Query 813 CGGAACAAAAGTAATTATATACAACTTGTGGCTTAATGATGAAGGAATCTATGAATTGAG 872
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 896 TGGAACAAAAGTAATTATATACAACTTGTGGCTTAATGATGAAGGAATCTATGAGCTGAG 955
Query 873 TTTTGACGACGATGATGAGGATATACGGCTCCGAGATGAGAATGCCCAGGATGGGAAACG 932
|||||||||||| || |||||||| |||||||||||||||| || | || || |||||
Sbjct 956 TTTTGACGACGACGAGGAGGATATCCGGCTCCGAGATGAGAGTGTGAATGACGGAAAACG 1015
Query 933 GTTGTACGC-TAAAACATTGGAACTAAGATCTCATATTTCATACCGC-TATCGACATTCG 990
|||| || | ||||| ||||||||| ||||||||||||||||||| | || || ||||
Sbjct 1016 GTTGCAC-CATAAAATATTGGAACTGAGATCTCATATTTCATACCACTTA-CGTTATTCT 1073
Query 991 CTAAGGGCCTACATTTCCATGCTATATCTCAAGAAGTTCAAAAACTTCAAAATTATTCTT 1050
|| ||||| || ||| ||| |||||||||| ||||||||||||||||||||||| ||
Sbjct 1074 CTGAGGGCTTATGCTTCAATGTTATATCTCAAAAAGTTCAAAAACTTCAAAATTATAATT 1133
Query 1051 CGGGGAATCCCTGTGGAGCAATTCAACATTGCTGATGAATTCAGACATCCTGAGA-TAAT 1109
|||||||||||||||||||| |||||||||||||||| ||||||| ||| |||| || |
Sbjct 1134 CGGGGAATCCCTGTGGAGCAGTTCAACATTGCTGATGGATTCAGATTTCCCGAGATTATT 1193
Query 1110 AATGTACAAACCCCA-AGCAGCTGCAATGGAATATGCTGCCACTGGAATTAAAGTTGGAT 1168
|| |||||| ||||| | ||||| ||| |||| | ||| |||||| ||| ||| ||||||
Sbjct 1194 AA-GTACAAGCCCCATA-CAGCTACAACGGAACAAGCTTCCACTGAAATCAAAATTGGAT 1251
Query 1169 TCATCAAGGAGGCGCCTAAACTTCCAATTTGTGGTTTCAATGTCTATCACAAAAACCGTC 1228
| | |||||||| ||||| ||| |||| || ||||||||||| ||||||||||||||||
Sbjct 1252 TTGTAAAGGAGGCACCTAAGCTTGCAATCTGCGGTTTCAATGTGTATCACAAAAACCGTC 1311
Query 1229 TCATCCGGCCATTCTGGAAGGTCGTTCT-GGA-AGGATCAACGAGAGGCAATGGTGTTGT 1286
|||||||||| |||||||||||| | | ||| ||| | ||| |||| | ||||||||
Sbjct 1312 TCATCCGGCCTTTCTGGAAGGTCACTATGGGAGGGGA-C-TCGACAGGCCACGGTGTTGT 1369
Query 1287 GGGAGTTCTTGAAGCAAACTTCATAGAACCAGCCCACGATAAGCAAGATTTTGAGAGATC 1346
|||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct 1370 GGGAGTTCTTGAAGCAAACTTCATAGAACCAGCCCACGATAAGCAAGATTTTGAAAGGTC 1429
Query 1347 TTCTCTATTTCTGCGGCTGGAGGGGAGGCTGAAAAGGATTATCTCT-GATTACTGGCAAA 1405
||||||||||| ||||||||||| |||| |||||| |||| ||| | | ||||||| | |
Sbjct 1430 TTCTCTATTTCAGCGGCTGGAGGCGAGGTTGAAAAAGATTGTCTATAG-TTACTGGTATA 1488
Query 1406 GCCACTGCCACGTTTTCGGATACCA-AACTGGTCAAATCCCTGCAGATAGGTCGAAAAGG 1464
||||||||||| |||| |||||||| || | |||||| |||||||||| |||||||| |
Sbjct 1489 GCCACTGCCACCTTTTAGGATACCATAAATA-TCAAATGCCTGCAGATAAGTCGAAAAAG 1547
Query 1465 ATAGCAATACCTGATCAACCGCCTACTGTCAGTACATTCAATCCTTCGCCTTTGCCTTCT 1524
|||||||||||||||||||| |||||| |||||||| |||||||||||||||||||||||
Sbjct 1548 ATAGCAATACCTGATCAACCTCCTACTATCAGTACAGTCAATCCTTCGCCTTTGCCTTCT 1607
Query 1525 GATAAAATTAGTCAAGGCGGTCCTATAATACGTGAAATCAATCTTAGTAACGCCACTTCA 1584
||||||||||||||||| || ||||||||||||||||||||||||||||||||||| |||
Sbjct 1608 GATAAAATTAGTCAAGGTGGCCCTATAATACGTGAAATCAATCTTAGTAACGCCACCTCA 1667
Query 1585 AGCCGTACAGTTGCTGTTGCAGCACCGCATTTGAGAAATTCCACGGGTTTAAGAAGTAAC 1644
||||||||||||||| |||| | || ||||||||||||||||| |||||||||||||||
Sbjct 1668 AGCCGTACAGTTGCTTTTGCTTCGCCACATTTGAGAAATTCCACTGGTTTAAGAAGTAAC 1727
Query 1645 TTCCAACCCGTGCAGCTCAACCCACAACCTGCAGCTGCCGATACTGGAAACAACATCGTT 1704
|| ||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |
Sbjct 1728 TTTCAACCCGTGCAGCTCAACCCACAACCTACAGCTGCCGATACTGGAAACAACCTCGAT 1787
Query 1705 GGCAAGTCAGCTGATGAGATAAGGGAAGAGAACATACAACTCTTCATGAGGTGCGAGGAA 1764
||||||||||| | ||||||| | |||||||| ||||||||||||||||||||||||||
Sbjct 1788 GGCAAGTCAGCGGGTGAGATACGCCAAGAGAACTTACAACTCTTCATGAGGTGCGAGGAA 1847
Query 1765 TATATAAAGAAAGAGAATGAAATAGAACAGACGGTAAAGAGCTTAGAAAAGGAACTGGAA 1824
|||||||||||||||||||||| |||||||||||| |||||||||||||| |||||||||
Sbjct 1848 TATATAAAGAAAGAGAATGAAACAGAACAGACGGTGAAGAGCTTAGAAAAAGAACTGGAA 1907
Query 1825 GAAGTTAAAAGTAAATGTGCACAACTTGCTTTGCTTGTGGACGCTAAGAAGAAGGAGATG 1884
||| ||||||||||||||||||| |||||| |||| ||||| ||||||||||||||||||
Sbjct 1908 GAATTTAAAAGTAAATGTGCACACCTTGCTCTGCTCGTGGATGCTAAGAAGAAGGAGATG 1967
Query 1885 CAACAAGTTTAG 1896
||||||| ||||
Sbjct 1968 CAACAAGCTTAG 1979
> AT4G36270.1 | Symbols: | ATP binding | chr4:17161024-17165241
REVERSE LENGTH=2163
Length=2163
Score = 726 bits (393), Expect = 0.0
Identities = 562/642 (88%), Gaps = 17/642 (3%)
Strand=Plus/Plus
Query 37 GACAGTGACAGTGAC---GACGACGTCGGAGGAGGAATAGGA-ATGGGTCGAAGCTTGAC 92
||||||||||||||| ||||||| | |||||||| |||| | ||||||| || |
Sbjct 163 GACAGTGACAGTGACAATGACGACGGAGTAGGAGGAAGAGGAGCT-TTTCGAAGCATGGC 221
Query 93 ATCTCTTATGGAGAATCAGCAAGTTTC--GAACG-CTGATG-CTGCGACGGTGGCTCCTC 148
|| || ||||| || || |||||| | | ||| ||| || | |||||||| |||||||
Sbjct 222 GTCCCTAATGGACAAACATCAAGTTCCAAGTACGACTGCTGAC-GCGACGGTTGCTCCTC 280
Query 149 GAGAAACCCTAGAATGTCGGAG-TTTCTGGAAAGCCGGCGAAAACTTTGTGATCCCTTCC 207
|||||| |||||| || ||||| ||| ||||| ||||| |||||||| ||||||||| ||
Sbjct 281 GAGAAAACCTAGAGTGCCGGAGCTTT-TGGAAGGCCGGAGAAAACTTCGTGATCCCTACC 339
Query 208 GGTGTTAC---TCCAACTGCTCCAGGTATGGTTGAGCATGCTCGTGTTCATCCAAAGTTT 264
|||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 340 GGTGTTACTAATCCAGCTGCTCCAGGTATGGTTGAGCATGCTCGTGTTCATCCAAAGTTT 399
Query 265 CTTCACTCGAATGCTACTTCACATAAATGGGCTTTTGGAGCAATCGCAGAGCTACTTGAC 324
||||||||||||||||||||||| |||| ||||||||||||||| || |||||| |||||
Sbjct 400 CTTCACTCGAATGCTACTTCACACAAATAGGCTTTTGGAGCAATAGCCGAGCTAATTGAC 459
Query 325 AATGCGGTTGACGAGGTCCAAAACGGAGCCACCTTTGTCAAGATTGATAAGATCAATATT 384
||||| ||||||||| | ||||| || || || ||||| |||||||||||||||||||||
Sbjct 460 AATGCTGTTGACGAGATACAAAATGGTGCTACGTTTGTTAAGATTGATAAGATCAATATT 519
Query 385 GTTAAAGATAATACCCCTGCTTTAGTTTTCCAAGATAATGGTGGTGGGATGGATCCCAAT 444
|| ||||||||| |||| |||||||||||||||||| |||| ||||| ||||||||| ||
Sbjct 520 GTCAAAGATAATTCCCCAGCTTTAGTTTTCCAAGATGATGGCGGTGGAATGGATCCCGAT 579
Query 445 GGGATCAGAAAATGCATGAGCTTAGGCTACTCGTCAAAGAAGTCTAATACGACGATTGGA 504
||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 580 GGGCTCAGAAAATGCATGAGCTTAGGCTACTCATCAAAGAAGTCTAATACGACGATTGGA 639
Query 505 CAGTATGGAAATGGTTTTAAGACGAGTACCATGAGACTTGGAGCTGATGCCATCGTGTTT 564
||||||||||||||||| ||||| ||||||||||||||||||||||||| || || |||
Sbjct 640 CAGTATGGAAATGGTTTCAAGACAAGTACCATGAGACTTGGAGCTGATGATATTGTTTTT 699
Query 565 AGTCGCTCAACTCGTGGAGGCAAATCTACACAGAGCATTGGTCTTCTGTCTTACACATTC 624
| ||||||||||||||||||||||||||| |||||| |||| |||||||| |||||||||
Sbjct 700 ACTCGCTCAACTCGTGGAGGCAAATCTACTCAGAGCGTTGGCCTTCTGTCATACACATTC 759
Query 625 CTTAGGAAAACTGGTCAGGATGATGT-GATCGTTCCTATGAT 665
|| || |||||||||||||||||||| | | |||||||||||
Sbjct 760 CTCAGAAAAACTGGTCAGGATGATGTCGTT-GTTCCTATGAT 800
Score = 606 bits (328), Expect = 2e-172
Identities = 486/561 (87%), Gaps = 15/561 (3%)
Strand=Plus/Plus
Query 1005 TTCCATGCTATATCTCAAGAA-GTTCAAAAACTTCAAAATTATTCTTCGGGGAATCCCTG 1063
||| ||| |||||||||| || |||||| || ||||||||||| ||||| ||||||||||
Sbjct 1140 TTCAATGTTATATCTCAA-AAGGTTCAATAATTTCAAAATTATACTTCGTGGAATCCCTG 1198
Query 1064 TGGAGCAATTCAACATTGCTGATGAATTCAGACAT-CCTGAGA-TAATAATGTACAAACC 1121
||||||| |||||||||||||||||||| ||| | ||||||| || ||| |||||| ||
Sbjct 1199 TGGAGCAGTTCAACATTGCTGATGAATTAAGA-TTACCTGAGACTATTAA-GTACAATCC 1256
Query 1122 CCAAGCAGCTGCAATGGAATATGCTGCCACTGGAATTAAAGTTGGATTCATCAAGGAGGC 1181
|| | | | ||| |||| | ||| |||||| ||| ||||||||||| || ||||||||
Sbjct 1257 CC-A-TA-CAACAAAGGAAAAAGCTCCCACTGAAATCAAAGTTGGATTTATAAAGGAGGC 1313
Query 1182 GCCTAAACTTCCAATTTGTGGTTTCAATGTCTATCACAAAAACCGTCTCATCCGGCCATT 1241
|||||| ||| || ||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1314 GCCTAAGCTTGCAGTTTGTGGTTTCAATGTCTATCACAAAAACCGTCTCATCCGGCCTTT 1373
Query 1242 CTGGAAGGTCGTTCTGGAAGGATCAACGAGAGGCAATGGTGTTGTGGGAGTTCTTGAAGC 1301
|||||||||| | ||| ||| || |||||||| ||||||||||||||||||||||||
Sbjct 1374 CTGGAAGGTCACTATGGGAGGGGAAAGGAGAGGCAGTGGTGTTGTGGGAGTTCTTGAAGC 1433
Query 1302 AAACTTCATAGAACCAGCCCACGATAAGCAAGATTTTGAGAGATCTTCTCTATTTCTGCG 1361
|||||| |||||||| |||||||||||||||||||||||||| ||||||||||||| |||
Sbjct 1434 AAACTTTATAGAACCGGCCCACGATAAGCAAGATTTTGAGAGGTCTTCTCTATTTCAGCG 1493
Query 1362 GCTGGAGGGGAGGCTGAAAAGGATTATCTCTGATTACTGGCAA-AGC-CACTGCCACGTT 1419
| |||||| |||||||||| |||| ||||| |||||||| || | | |||||||||||
Sbjct 1494 GTTGGAGGCAAGGCTGAAAAAGATTGTCTCTAATTACTGG-AATA-CACACTGCCACGTA 1551
Query 1420 TTCGGATACCAAACTGGTCAAATCCCTGCAGATAGGTCGAAAAGGATAGCAATACCTGAT 1479
||||||||| ||| | ||| |||||||||| |||||||||||||||||||||||||
Sbjct 1552 TTCGGATACTGTACTTATGGAATGCCTGCAGATAAGTCGAAAAGGATAGCAATACCTGAT 1611
Query 1480 CAACCGCCTACTGTCAGTACATTCAATCC-TTCGCCTTTGCCTTCTGATAAAATTAGTCA 1538
|||||||||||||||| |||||||||||| || |||||||||||||||| ||||||||||
Sbjct 1612 CAACCGCCTACTGTCAATACATTCAATCCCTT-GCCTTTGCCTTCTGATGAAATTAGTCA 1670
Query 1539 AGGCGGTCCTATAATACGTGA 1559
||| |||| |||||||||||
Sbjct 1671 AGGTGGTCAGATAATACGTGA 1691
Score = 272 bits (147), Expect = 8e-72
Identities = 193/215 (90%), Gaps = 4/215 (2%)
Strand=Plus/Plus
Query 1684 GATACTGGAAACAACATCGTTGGCAAGTCAGCTG-ATGAGATAAGGGAAGAGAACATACA 1742
||||||| ||||||| |||||||||||||||| | |||||||||| ||||||||||||||
Sbjct 1816 GATACTGAAAACAACCTCGTTGGCAAGTCAGC-GCATGAGATAAGCGAAGAGAACATACA 1874
Query 1743 ACTCTTCATGAGGTGCGAGGAATATATAAAGAAAGAGAATGAAATAGAACAGACGGTAAA 1802
||||||||||||||||||||||||| |||||||||||| |||| | |||||||||||||
Sbjct 1875 ACTCTTCATGAGGTGCGAGGAATATGTAAAGAAAGAGACTGAACTGGAACAGACGGTAA- 1933
Query 1803 G-AGCTTAGAAAAGGAACTGGAAGAAGTTAAAAGTAAATGTGCACAACTTGCTTTGCTTG 1861
| | ||||| |||||||||||||||| ||||||||||||||||| |||||| || || |
Sbjct 1934 GTAACTTAGCAAAGGAACTGGAAGAAACTAAAAGTAAATGTGCACGACTTGCATTACTCG 1993
Query 1862 TGGACGCTAAGAAGAAGGAGATGCAACAAGTTTAG 1896
|||| ||||||| || |||||||||||||||||||
Sbjct 1994 TGGATGCTAAGAGGAGGGAGATGCAACAAGTTTAG 2028
Score = 167 bits (90), Expect = 4e-40
Identities = 127/145 (88%), Gaps = 2/145 (1%)
Strand=Plus/Plus
Query 790 CAGTTCGAGGATATTGGAACTCACGGAACAAAAGTAATTATATACAACTTGTGGCTTAAT 849
||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 988 CAGCTCGAGGATATTGGAACTCATGGAACAAAAGTAATTATATACAACTTGTGGCTTAAT 1047
Query 850 GATGAAGGAATCTATGAATTGAGTTTTGACGACGATGATGAGGATATACGGCTCCGAGAT 909
|||||||||||||| || |||||||| ||||||| ||||||| || || |||||||||
Sbjct 1048 GATGAAGGAATCTACGAGCTGAGTTTTCACGACGACAATGAGGACATCCGACTCCGAGAT 1107
Query 910 GAGAA-TGCCCAGGATGGGAAACGG 933
|| || || ||| || | ||||||
Sbjct 1108 GA-AAGTGTCCATGACAGTAAACGG 1131
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 93875019150
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5