BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg888440
Length=3537
Score E
Sequences producing significant alignments: (Bits) Value
AT4G36150.1 | Symbols: | Disease resistance protein (TIR-NBS-L... 3825 0.0
AT5G45250.1 | Symbols: RPS4 | Disease resistance protein (TIR-N... 285 2e-75
> AT4G36150.1 | Symbols: | Disease resistance protein (TIR-NBS-LRR
class) family | chr4:17104719-17108711 FORWARD LENGTH=3597
Length=3597
Score = 3825 bits (2071), Expect = 0.0
Identities = 3080/3555 (87%), Gaps = 117/3555 (3%)
Strand=Plus/Plus
Query 37 CCGCAGCATCAAGTTTTCATGAATTTTCGAGGGAAGCAATTGCGGAAGGGTTTTGTCAGC 96
|||||||||||||| ||| | ||||| |||||||| ||| ||||||| ||||| ||||||
Sbjct 106 CCGCAGCATCAAGTCTTCCTCAATTTCCGAGGGAAACAACTGCGGAACGGTTTCGTCAGC 165
Query 97 CATCTAGAGAAGGCCTTGAAAAGGGATGGAATCAACGCCTTTATCGAC-GAAGATGAAAC 155
||||| ||||| ||||||| |||||||||||||||| |||||||||| ||| | |||||
Sbjct 166 CATCTGGAGAAAGCCTTGAGGAGGGATGGAATCAACGTCTTTATCGACAGAA-ACGAAAC 224
Query 156 TAGAGGTA-ATGATCTCAGCATCCTCTTT-TCCAGAATTGATGAGTCGAGGATCGCGCTC 213
| ||||| | |||||||| | ||| ||| || ||||| | ||||||||||||||||||
Sbjct 225 CAAAGGTAGA-GATCTCAGTAACCT-TTTCTCGAGAATCCAGGAGTCGAGGATCGCGCTC 282
Query 214 GCGATCTTCTCGAGCATGTATACGGAGTCAAATTGGTGTTTAGACGAGCTGGTGAAAATA 273
|| || ||||| ||||||||||||||||| ||||||| || |||||||| ||||| ||
Sbjct 283 GCCATTTTCTCTAGCATGTATACGGAGTCGTATTGGTGCTTGGACGAGCTTGTGAAGATT 342
Query 274 AAGGAGTGCGTTGACTTGGGCAAACTTGTTGTAATTCCCATCTTCTACAAGGTGGAAACA 333
||||| || |||||||| |||| |||||| || |||||||||||||||| |||||| |||
Sbjct 343 AAGGATTGTGTTGACTTAGGCACACTTGTCGTTATTCCCATCTTCTACATGGTGGACACA 402
Query 334 GACGATGTGAAAAATCTAAAGGGAGTC-TTTGGTGACAAGTTTTGGGAATTGGTTAAGAC 392
|||||||| ||||| |||||||| | | |||||| ||| ||| ||| |||||| ||||||
Sbjct 403 GACGATGTCAAAAACCTAAAGGGCG-CTTTTGGTTACACGTTCTGGAAATTGGCTAAGAC 461
Query 393 ATGTAATGGTGAAAAGCTCGATAAGTGGAAAGAAGCTTTAAAGGTTG-TCAC-AAACAAG 450
|||||||||||||||||||||||||||||| |||||||||||| || || | ||| |||
Sbjct 462 TTGTAATGGTGAAAAGCTCGATAAGTGGAAACAAGCTTTAAAGGATGTTC-CTAAA-AAG 519
Query 451 ATGGGCTTCACGTTAG-GCGAAATGAGCAATGAAGGTGAATACGTTGAGAAAATTGTAAG 509
| ||||| ||||| | ||||||||||| ||||||| |||| | | | |||||||| |
Sbjct 520 CTTGGCTTTACGTT-GAGCGAAATGAGCGATGAAGGCGAATCCATCAATCAAATTGTAGG 578
Query 510 GCAAGTCATAGAA-GTGC--T-ATCTAATGTT-TCGACGGATCTGA-AAAGAGAAGTCCC 563
| |||||||| || |||| | |||| ||||| | | | ||||| | |||| ||| ||||
Sbjct 579 GGAAGTCATA-AAGGTGCTATCATCTGATGTTAT-GCCTGATCT-AGAAAGGGAAATCCC 635
Query 564 CATTGACGACCCTTCTGCAGGAGAAGGAGAA-ACG--CCTGAAGCTGCTCCTGACTCGCT 620
|||||| || |||| | || | ||||||| | | ||||||||||||||||||||||
Sbjct 636 CATTGATGATCCTTTTCCA--A-CAGGAGAACAAGTACCTGAAGCTGCTCCTGACTCGCC 692
Query 621 TCCTCATCTGTTTGGCA-TCAACACACGACTTCAGCAGTTGGAAGAGAAGTTAGATTTTG 679
||||| ||||||||||| | || ||||||||| |||| |||||||||||||| |||||||
Sbjct 693 TCCTCCTCTGTTTGGCATTGAA-ACACGACTTAAGCAATTGGAAGAGAAGTTGGATTTTG 751
Query 680 AGTGCAA-GAGTACGCTTATTATTGGTGTTGTTGGGATGCCGGGTATTGGTAAGACCACC 738
||||||| || ||| |||| |||||||||||||||||||| |||||||||||||||||
Sbjct 752 AGTGCAAGGA-TACTCTTACCATTGGTGTTGTTGGGATGCCTGGTATTGGTAAGACCACT 810
Query 739 CTGACGAGTATG-TTGTATGAAAATTGGCAAGGCGGGTTCCTAAGCCGTGCCTTTCTTCA 797
||||| |||||| || |||||||| |||||| || |||||| || ||| ||||||||
Sbjct 811 CTGACTAGTATGCTT-TATGAAAAGTGGCAACACGATTTCCTACGCTGTGTTTTTCTTCA 869
Query 798 TGATGTCAGTCAA-ATGTCGAAACG-CTACACTAAACGGCAAATGAGGAACATTCTCA-T 854
||||||| || || |||| |||| | || || | | || || ||| |||| ||| |
Sbjct 870 TGATGTCCGT-AAGATGTGGAAA-GACTGCA-T-GATGG---AT-CGGAGCATTTTCATT 921
Query 855 GACGGAGTTGTTGAAGGAAGTTGACTTGAAGCAAAAAGTCGCTGACATGTCGCCTAAATC 914
|| |||||||||||||| | | || |||| ||| ||||||||||| | || ||| ||||
Sbjct 922 GA-AGAGTTGTTGAAGGATGATAACGTGAACCAAGAAGTCGCTGACTTTTCACCTGAATC 980
Query 915 CTTGAAGGCACACCTGCTCAGTATGAAATCTCTTATTGTTCTTGATAATGTGAGTGACAA 974
||||||||||| ||| || |||| |||||||||| ||||||||||||||||||| |||||
Sbjct 981 CTTGAAGGCACTCCTACTGAGTAAGAAATCTCTTGTTGTTCTTGATAATGTGAGCGACAA 1040
Query 975 GAAACAGATCA-AGGATCTTCTCGAGGAA-GATGACTGGATTAAGATAGGTAGCAGAATT 1032
||||||||| | ||| |||||||| |||| | ||||||||||||| |||||| |||| |
Sbjct 1041 GAAACAGAT-AGAGGTTCTTCTCGGGGAATCA-GACTGGATTAAGAGAGGTAGTAGAA-T 1097
Query 1033 ATTT-TCACGACAAGCGACATCTCAGTGATCGAGGGGATGGTCGATGACACATATGAGGT 1091
||| |||| || ||||||| || ||||||||||||||||| ||||| |||||||||||
Sbjct 1098 CTTTATCACAACTAGCGACAGGTCGGTGATCGAGGGGATGGTTGATGATACATATGAGGT 1157
Query 1092 CCAAAGATTGACTGGCAGAGACAGCTTTGACTACTTCAGCCATTTTGCCTTTAATTTTAA 1151
|| ||||||||||| |||||||||||||| ||||| ||| |||||||||||| | |||
Sbjct 1158 CCTGAGATTGACTGGTAGAGACAGCTTTGAGTACTTTAGCTATTTTGCCTTTAGTGGTAA 1217
Query 1152 ACTTCCTACTCCGGAGGGTAA-TTTCATTAATCTTTCTAGATTGTTTGTGGATTATGCCA 1210
||| | |||| | | | || |||||| ||||| ||||||||||||| ||||||||| |
Sbjct 1218 GCTTTGTCCTCCAGTGAG-AACTTTCATGAATCTGTCTAGATTGTTTGCGGATTATGCTA 1276
Query 1211 AAGGAAACCCATTAGTTCTCAAGATATTGGGTGTCGAGCTTAGTGGaaaa-aaaGAGAAA 1269
|||| |||||||||| |||||||||||||||| ||||| | ||||||| | | || |
Sbjct 1277 AAGGCAACCCATTAGCTCTCAAGATATTGGGTAAGGAGCTAAATGGAAAAGACA-AG-AC 1334
Query 1270 T-ACT-GGACAGATAAGCTTCGCGAGTTGGCA-G-AAAGTCCCATTAAGA-AGTTACAAG 1324
| ||| ||| ||| || ||| || || | | | | ||||||||| ||||| | ||||||
Sbjct 1335 TCACTGGGA-AGAGAAACTTAGCAAGCT-G-ATGCAAAGTCCCAATAAGACA-ATACAAG 1390
Query 1325 ATGTCTTGCGGATTAGCTATGATGGACTAGGTCAGCT-TCAAAAAGATGTGTTTCTCGAT 1383
||||||||||| | |||||||||| ||||||| | | ||| |||||||| ||||| |||
Sbjct 1391 ATGTCTTGCGGGTAAGCTATGATGAACTAGGTTTG-TCTCACAAAGATGTCTTTCTTGAT 1449
Query 1384 GTCGCGTGTTTCTTTAGATCAGGGGATGATTATTACGTGAGGTGTTTAGTGGAGTCTTGT 1443
||||| ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct 1450 GTCGCATGTTTCTTTAGATCAGGGGATGAGTATTACGTGAGGTGTTTAGTGGAATCTTGT 1509
Query 1444 GACACTG-AGCCCATTGATGCTGTGAGTGAAATAAAGGATCTTGCCAGTAAATTCTGGAT 1502
||||||| || |||||||| |||||||||||||||||||||||||||| ||||||| |||
Sbjct 1510 GACACTGAAG-CCATTGATACTGTGAGTGAAATAAAGGATCTTGCCAGCAAATTCTTGAT 1568
Query 1503 AAACATTTCTGGCGGGCGAATGGAGATGCATGATTTACTGTATACATTTGGCAAGGAACT 1562
||||||||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||
Sbjct 1569 AAACATTTCTGGCGGACGAGTGGAGATGCATGATTTACTGTATACATTTGGTAAGGAACT 1628
Query 1563 TGGTTCACAATCACAAGGGTTGCGTAGGCTGTGGAACCATATA-CTCATTGTTGGTGCGC 1621
||| | |||||||||| |||||||||||||||||||| | | | |||| |||||||
Sbjct 1629 TGG-T-----TCACAAGGGTCGCGTAGGCTGTGGAACCATAAAGC-CGTTGTAGGTGCGC 1681
Query 1622 TGAAGAAAAGAGCGGGAGCAGACAGTGTGAGAGGTATTTTTCTCGACATGTTTGAACTGA 1681
||||||| |||| |||||| | ||||||||||||||||| ||||||| ||||||||
Sbjct 1682 TGAAGAATAGAGTGGGAGC---C---GTGAGAGGTATTTTTCTTGACATGTCTGAACTGA 1735
Query 1682 AGAAGGAACTTCCTTTGGA-AAAATGTACCTTCACT-GAGATGCGTAATCTTAGGTACCT 1739
||||| ||||||||||||| | || ||||||||| | ||||||| |||||||| |||||
Sbjct 1736 AGAAGAAACTTCCTTTGGACAGAA-GTACCTTCA-TCAAGATGCGCAATCTTAGATACCT 1793
Query 1740 CAAATTCTATAGTTCTCGTTGTCATCAG-GAAGGCGAAGCTGACT-GCAAAATAAACTTC 1797
|||||||||||||||||||||| ||| | ||| | |||||||| | ||||| |||||||
Sbjct 1794 CAAATTCTATAGTTCTCGTTGTGATC-GAGAATGTGAAGCTGA-TAGCAAACTAAACTTT 1851
Query 1798 CCTGAGGGAGTTGAGTTTTCTTTGGATGAAG-TACGATATCTTTATTGGCTAAAATTCCC 1856
|| |||||| |||||||| | ||||||| || |||| || || |||||||||||||||||
Sbjct 1852 CCGGAGGGACTTGAGTTTCCGTTGGATG-AGATACGTTACCTCTATTGGCTAAAATTCCC 1910
Query 1857 TTTGGA-GAAACTTCCAAAAGACTTCAACCCCAAGAATCTTACCGACCTTAATCTGCCTT 1915
|| || |||||||||||||||||||||||||||||||||||||||| |||| |||||||
Sbjct 1911 GTT-GATGAAACTTCCAAAAGACTTCAACCCCAAGAATCTTACCGACTTTAACCTGCCTT 1969
Query 1916 ACAGCGAGATTGAAGAGGTCTGGGA-GGGTCTTAAGGATACACCA-AAGTTGAAGTGGGT 1973
||||||||||||||||| ||||||| ||| | |||||||||| || ||||| ||||||||
Sbjct 1970 ACAGCGAGATTGAAGAGCTCTGGGAGGGGGC-TAAGGATACA-CAGAAGTTAAAGTGGGT 2027
Query 1974 TGATCTTAGCCACTCAAGCAAGTTATGTAATCTAACAGGGTTGCTAAATGCTAAAAGTCT 2033
|||||||||||||||||| |||||||| ||||| ||||||||||||||||| | |||||
Sbjct 2028 TGATCTTAGCCACTCAAGAAAGTTATGCAATCTGTCAGGGTTGCTAAATGCTGAGAGTCT 2087
Query 2034 CCGAAGATTGAATCTTGAAGGCTGCACGAGTTTGGAGGAGTTGCCTAGTGAGATGAAAAG 2093
|| |||| | ||||||||||| |||||||||||||||||||||||| ||||||||||| |
Sbjct 2088 CCAAAGACTAAATCTTGAAGGGTGCACGAGTTTGGAGGAGTTGCCTCGTGAGATGAAACG 2147
Query 2094 TTTGGAGAA-CCTTGTTTTCCTCAACATGAGAGGATGCACGAGTCTCCGGGTTCTTCCGC 2152
| || || |||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2148 CAT-GAAAAGCCTTATTTTCCTCAACATGAGAGGATGCACGAGTCTCCGGGTTCTTCCGC 2206
Query 2153 ATATGAATCTGATCTCTATGAAAACTCTCATCCTTACCAACTGCTCAAGCCTTGAGGAAT 2212
|||||||||||||||| |||||||||||||||| ||||| ||||||||| || || |||
Sbjct 2207 GTATGAATCTGATCTCTTTGAAAACTCTCATCCTCACCAATTGCTCAAGCATTCAGAAAT 2266
Query 2213 TCCAGGTGATTTCAGATAATATAGAAACTCTATACTTAGATGGAACTGCAATTGTTCAA- 2271
||||||||||||||||||| ||||||||||| ||||||||||||||||||||| |||
Sbjct 2267 TCCAGGTGATTTCAGATAACCTAGAAACTCTACACTTAGATGGAACTGCAATTGG-CAAA 2325
Query 2272 CTTCCT-CCAAACATGGTGAAGCTCCAGAGACTGATTGTATTGAACTTGAAAGACTGCAA 2330
|||||| || | ||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 2326 CTTCCTACCGA-CATGGTGAAGCTCCAGAAACTGATTGTATTGAACTTGAAAGACTGCAA 2384
Query 2331 AATGTTGAGG-GCAGTTCCACAATGCCTGGGGAGGCTGAAAGCTCTGCAAGAACTGGTGC 2389
|||||| ||| ||||||||| ||| ||| |||| ||||||||||||||||||||||||||
Sbjct 2385 AATGTT-AGGTGCAGTTCCAGAATTCCTAGGGAAGCTGAAAGCTCTGCAAGAACTGGTGC 2443
Query 2390 TATCTGGTTGTTCAACCCTCAAGACTTTTCCAGTTCCCATTGAAAACATGAAATGTTTGC 2449
||||||||||||||| |||||||||||| ||||||| ||||||| ||||||||| ||||
Sbjct 2444 TATCTGGTTGTTCAAAGCTCAAGACTTTTTCAGTTCCTATTGAAACCATGAAATGCTTGC 2503
Query 2450 AGATTTTATTGCTGGACGGGACAGAAATTAAAGAAATCCCAAAGATATTGCAGTACAATA 2509
|||| |||||||| |||||||||| | |||||||||| |||||| |||||| || |||||
Sbjct 2504 AGATATTATTGCTTGACGGGACAGCACTTAAAGAAATGCCAAAGTTATTGCGGTTCAATA 2563
Query 2510 GCTCAAAAGTGGAAGATCTACGCGAATTAAGACGTGGTGTGAAAGGCCTATCCTCATTGC 2569
|||| | |||||||||||||| |||||||||||||||| | || ||||||||||||||||
Sbjct 2564 GCTCTAGAGTGGAAGATCTACCCGAATTAAGACGTGGTATTAATGGCCTATCCTCATTGC 2623
Query 2570 GACGTCTATGCTTAAGTAGGAATGGTATGATCAGCAATCTGCAAATCGACATCAGTCAGC 2629
|||||||||||||||| ||||| ||||||||||||||||||||||||||||| ||| |
Sbjct 2624 GACGTCTATGCTTAAGCAGGAACAATATGATCAGCAATCTGCAAATCGACATCAATCAAC 2683
Query 2630 TATATCATCTGAAATGGCTT-GACCTGAAGTACTGCAAGAATCTCACATCAATTTCATTG 2688
| ||||||||||||||| || |||||||| |||||||||||||||||||||||| |||||
Sbjct 2684 TCTATCATCTGAAATGG-TTAGACCTGAAATACTGCAAGAATCTCACATCAATTCCATTG 2742
Query 2689 CTTCCACCAAATCTAGAGATTTTAGATGCACATGGCTGCGAGAAACTGAAAACAGTTGCC 2748
|||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct 2743 CTTCCACCAAATCTAGAGATCTTAGATGCACATGGCTGCGAAAAACTGAAAACAGTTGCG 2802
Query 2749 TCCCCCATGGCCCTTCCCAAGCTTATGGAGCAGGTTCGGTCTAAATTCATTTTCACCAAC 2808
|| ||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||
Sbjct 2803 TCGCCCATGGCCCTTCTTAAGCTTATGGAGCAGGTTCAGTCTAAATTCATTTTCACCAAC 2862
Query 2809 TGCAACAAACTGGAACAAGTTGCAAAGAATAGCATCACATTGTATGCTCAAAGGAAATGT 2868
|||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| |
Sbjct 2863 TGCAACAATCTGGAACAAGTTGCAAAGAATAGCATCACATCGTATGCTCAAAGGAAAAGC 2922
Query 2869 CAGCTAGATGCACTTAGATGCTATAAAGAGGGAACTGTTTCAGAAGCTTTGCTCATCACT 2928
||||||||||||| ||||||||| |||||||| |||||||||||||||| ||||| ||
Sbjct 2923 CAGCTAGATGCACGTAGATGCTACAAAGAGGGGGGTGTTTCAGAAGCTTTGTTCATCGCT 2982
Query 2929 TGTTTTCCAGGAAGTGAAGTACCTTCATGGTTCAACCATCAAACATTCGGATCCAAACTA 2988
|| |||||||||||||| |||||||||||||||||| |||||||||| |||||| | ||
Sbjct 2983 TGCTTTCCAGGAAGTGATGTACCTTCATGGTTCAACTATCAAACATTTGGATCCGCATTA 3042
Query 2989 AAGCTTAAGTTCCCGCCACATTGGTGTGACAACGGGCTTTCAACATTAGTTTTATGCGCT 3048
| ||| ||||| ||||||||||||||||||||| ||||||||||| ||| | |||| |||
Sbjct 3043 AGGCTGAAGTTGCCGCCACATTGGTGTGACAACAGGCTTTCAACAATAGCTCTATGTGCT 3102
Query 3049 GTTGTCAAATTCCC---C-CGG--GATGAAATCAACCGTTTCTCAATAGATTGCACTTGT 3102
||||||| |||||| | | |||||||||||||||||||||||||| |||||||||
Sbjct 3103 GTTGTCACATTCCCTGACACTCAAGATGAAATCAACCGTTTCTCAATAGAGTGCACTTGT 3162
Query 3103 GAGTTCAAAAACGAGGTTGAGACATGTATACGTTTCAGTTGCACTCTTGGTGGAGGTTGG 3162
||||||||||| || ||| |||||||||||||||||||||||||||||||||| |||||
Sbjct 3163 GAGTTCAAAAATGAACTTGGGACATGTATACGTTTCAGTTGCACTCTTGGTGGAAGTTGG 3222
Query 3163 ATCGAATCACGGAAGATTGATTCGGACCATGTGTTTATAGGTTACACCAGTTCCTCACAC 3222
||||| || || ||||||||||| || ||||||||||| |||||||| ||| |||||||
Sbjct 3223 ATCGAGTCTCGCAAGATTGATTCAGATCATGTGTTTATCGGTTACACTAGTAGCTCACAC 3282
Query 3223 ATAACAAAACATCTAGAAGGGTCATTGAAGTCGCAAGAACATCATAAATATGTTCCTACT 3282
||||||||||||||||||||||| ||||||| | |||||||| |||||| |||||||||
Sbjct 3283 ATAACAAAACATCTAGAAGGGTCGTTGAAGTTGAAAGAACATGATAAATGTGTTCCTACG 3342
Query 3283 GAGGCTTCAATCGAATTTGCAGTGAGAGATGGACCAGGTGAGATTGTGAATTGTGGTTTA 3342
||||||||||||||||||| ||||| ||||||| ||||||| ||||||||||||||||||
Sbjct 3343 GAGGCTTCAATCGAATTTGAAGTGATAGATGGAGCAGGTGAAATTGTGAATTGTGGTTTA 3402
Query 3343 AGTTTGGTGTACGAGGAACCAAACCATGTCGTTGTTGAAGGGAATTGTAATGGAACTTCT 3402
||||||||||||||||||||||||||||||||||||||| |||| ||||| ||| ||||
Sbjct 3403 AGTTTGGTGTACGAGGAACCAAACCATGTCGTTGTTGAAAGGAACTGTAAAGGAGCTTCA 3462
Query 3403 TCAAGAAGAGAGGTGTCCGTTGGAGAGAGCATATTGAGCTTTGCTGCTGGGTATTTGTCC 3462
||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 3463 TCAAGAAGAGATATGTCCGTTGGAGAGAGCATATTGAGCATTGCTGCTGGGTATTTGTCC 3522
Query 3463 ACTGTTTTAAGGTTTATGTGGCTAGGTGTTGTTTTCTTTATGGTTTATGGGTTTGCTAGA 3522
| |||||| |||||| |||||||||||||||| ||||||||||||||||| ||| ||| |
Sbjct 3523 AATGTTTTGAGGTTTCTGTGGCTAGGTGTTGTATTCTTTATGGTTTATGGATTTTCTAAA 3582
Query 3523 TTTTTTGTTAGATAA 3537
||||||||| ||||
Sbjct 3583 ATTTTTGTTAAATAA 3597
> AT5G45250.1 | Symbols: RPS4 | Disease resistance protein (TIR-NBS-LRR
class) family | chr5:18321914-18326022 REVERSE LENGTH=3654
Length=3654
Score = 285 bits (154), Expect = 2e-75
Identities = 537/717 (75%), Gaps = 45/717 (6%)
Strand=Plus/Plus
Query 1726 AATCTTAGGTACCTCAAATTCTATAGTTCTCGTTGT-CATCAGGAAGGCGAAGCTGACTG 1784
||||| |||| ||||| ||||| | ||| | |||| || |||||| | || | ||
Sbjct 1747 AATCTCCGGTATCTCAAGTTCTACAATTCCCATTGTCCA-CAGGAATGTAAAACCAACAA 1805
Query 1785 CAAAATAAACTTCCCTGAGGGAGTTGAGTTTTCTTTGGATGAAGTACGATATCTTTATTG 1844
||||| ||| ||||||| | || || | | ||| | ||||| |||| || | ||
Sbjct 1806 TAAAATCAACATCCCTGATAAACTTAAGCTACCATTGAAAGAAGTTCGATGCCTCCACTG 1865
Query 1845 GCTAAAATTCCCTTTGGAGAAACTTCCAAAAGACTTCAACCCCAA-GAATCTTACCGACC 1903
||| |||||||| ||||||| ||||||||| || ||||| ||||| |||||| |||||
Sbjct 1866 GCTGAAATTCCCATTGGAGACACTTCCAAACGATTTCAA-CCCAATTAATCTTGTCGACC 1924
Query 1904 TTAATCTGCCTTACAGCGAGATTGAAGAGGTCTGGGAGGGTCTTAAGGATACACCAAAG- 1962
|||| ||||| ||||| || || ||| | | ||||||||| ||||| ||||| | |
Sbjct 1925 TTAAGCTGCCCTACAGTGAAATGGAACAACTTTGGGAGGGTGACAAGGACACACC-ATGC 1983
Query 1963 TTGAA-GTGGGTTGATCTTAGCCACTCAAGCAAGTTATGTAATC-TAACAGGGTTGCT-A 2019
|| || |||||| ||||| | |||||||| ||||| || | | | ||||||| | |
Sbjct 1984 TT-AAGGTGGGTCGATCTCAATCACTCAAGTAAGTTGTG-CAGCTTGTCAGGGTT-ATCA 2040
Query 2020 AATGCT-AAAAGTCTCCGAAGATTGAATCTTGAAGGCTGCACGAGTTTGGAGGAGTTGCC 2078
|| ||| ||||| || | ||| ||||| |||||||| ||||| | || | | ||| ||
Sbjct 2041 AAAGCTGAAAAG-CTTCAAAGGTTGAACCTTGAAGGTTGCACAACACTGAAAGCGTTTCC 2099
Query 2079 TA-GTGAGATGAAAAGTTTGGAGAA-CCTTGTTTTCCTCAA-CATG-AGAGGATGCACGA 2134
| ||| ||||||| | || || |||| |||| | || | || || || || || |
Sbjct 2100 -ACATGATATGAAAAAAAT-GAAAATGCTTGCTTTCTTGAATC-TGAAG-GGGTGTACAA 2155
Query 2135 GTCTCCGGGT-TCTTCC-GCATATGAATCTGATCTCTATGAAAACTCTCATC-CTTACCA 2191
|||| || | |||||| | | |||||| |||| ||| ||||||| || | | || | |
Sbjct 2156 GTCT-CGAATCTCTTCCAG-AGATGAATTTGATTTCTCTGAAAACACTTA-CTCTCAGCG 2212
Query 2192 ACTGCTCAAGC-CTTGAGGAA-TTCCAGGTGATTTCAGATAATATAGAAACTCTATACTT 2249
|||||||| | || ||||| |||| | |||||||||||||||||||||||||||||||
Sbjct 2213 GCTGCTCAA-CTTTTAAGGAATTTCC-GTTGATTTCAGATAATATAGAAACTCTATACTT 2270
Query 2250 AGATGGAACTGCAATT-GTTCAACTTCCTCCAAACATGGTGAAGCTCCAGAGACT-GATT 2307
|||||| || ||||| || || |||||| ||||||| |||||| |||||||| | ||
Sbjct 2271 AGATGGCACAGCAATAAGT-CAGCTTCCTATGAACATGGAGAAGCTTCAGAGACTTG-TT 2328
Query 2308 GTATTGAACT-TGAAAGACTGCAAAATGTT-GAGGGCAGTTCCA--CAATGCCTGGGGAG 2363
|||||||| | ||||||||||||||||| | |||| | ||||| | || ||| |||
Sbjct 2329 GTATTGAA-TATGAAAGACTGCAAAATGCTAGAGGAAA-TTCCAGGCCGTGT-TGGTGAG 2385
Query 2364 GCTGAAAGCTCTGCAAGAACTGGTGCTATCTGGTTGTTCAACCCTCAAGACTTTTCC 2420
||||||||||| ||||||||| | || |||| ||||| || ||||||| ||||||
Sbjct 2386 -CTGAAAGCTCTTCAAGAACTGATACTCTCTGATTGTTTAAATCTCAAGA-TTTTCC 2440
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 176085969930
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5