BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg888608
Length=1665
Score E
Sequences producing significant alignments: (Bits) Value
AT4G34580.1 | Symbols: COW1, SRH1 | Sec14p-like phosphatidylino... 2715 0.0
AT2G16380.1 | Symbols: | Sec14p-like phosphatidylinositol tran... 837 0.0
> AT4G34580.1 | Symbols: COW1, SRH1 | Sec14p-like phosphatidylinositol
transfer family protein | chr4:16515327-16519534 FORWARD
LENGTH=2767
Length=2767
Score = 2715 bits (1470), Expect = 0.0
Identities = 1601/1666 (96%), Gaps = 2/1666 (0%)
Strand=Plus/Plus
Query 1 ATGGCTGAGACCAAACCTGAAATAGAGATGTCGGAGGAAGAGAGGAAGATAGTGAAGATG 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 96 ATGGCTGAGACCAAACCTGAAATAGAGATGTCGGAGGAAGAGAGGAAGATAGTGAAGATA 155
Query 61 TGCTCGTTGAAGAAGAAAGCGATAAATGCATCAAACAGATTCAAGAACTCATTCAAGAAA 120
||||| ||||||||||||||||||||||||| ||||||||||||||||| |||||||||
Sbjct 156 AGCTCGCTGAAGAAGAAAGCGATAAATGCATCCAACAGATTCAAGAACTCCTTCAAGAAA 215
Query 121 AAAGGTCGGAGAAGCAGCAGCAGGGTCATGTCCGTGCCGATTGAGGACGACATTGACGCA 180
||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct 216 AAAGGTCGGAGAAGCAGCAGCAGAGTCATGTCCGTTCCGATTGAGGACGACATTGACGCA 275
Query 181 GAAGATCTTCAAGCTCTTGATGCTTTTCGTCAAGCTCTTGTCCTTGACGAGCTCTTGCCA 240
||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||
Sbjct 276 GAAGATCTTCAAGCTCTTGATGCTTTTCGTCAAGCTCTTATCCTTGACGAGCTTTTGCCA 335
Query 241 TCCAAACTCGATGATCTCCACATGATGCTTCGATTCTTGAGGGCAAGAAAGTTTGACATT 300
||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct 336 TCCAAACTCGATGATCTCCACATGATGCTTCGATTTTTGAGAGCAAGAAAGTTTGACATT 395
Query 301 GAGAAAGCTAAGCAGATGTGGAGTGACATGATTCAATGGAGGAAAGATTTCGGCGCTGAC 360
|||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 396 GAGAAAGCTAAGCAAATGTGGAGTGACATGATCCAATGGAGGAAAGATTTCGGCGCTGAC 455
Query 361 ACAATCATTGAGGATTTTGAGTTCGAAGAAATCGATGAAGTGATGAAGCACTACCCTCAA 420
|||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct 456 ACAATCATTGAGGATTTTGATTTCGAAGAAATTGATGAAGTGATGAAGCACTACCCTCAA 515
Query 421 GGCTATCACGGAGTAGACAAGGAAGGCAGACCAGTTTACATTGAGAGATTAGGTCAAATC 480
|||||||| ||||| ||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 516 GGCTATCATGGAGTTGACAAGGAAGGCAGACCAGTTTACATTGAGAGACTAGGTCAAATC 575
Query 481 GATGCTAACAAGCTACTCCAAGTGACAACAATGGACCGGTACGTGAAATATCATGTCAAA 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 576 GATGCTAACAAGCTACTCCAAGTGACAACAATGGACCGGTACGTGAAATATCATGTCAAA 635
Query 541 GAGTTCGAGAAGACTTTCAAGGTCAAGTTTCCTTCTTGTTCTGTCGCAGCGAATAAGCAT 600
||||||||||||||||||||||||||||| |||||||||||||| ||||| ||||| ||
Sbjct 636 GAGTTCGAGAAGACTTTCAAGGTCAAGTTCCCTTCTTGTTCTGTAGCAGCAAATAAACAC 695
Query 601 ATTGATCAGAGCACAACAATTCTTGACGTGCAAGGCGTGGGGCTTAAGAACTTCAGCAAA 660
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 696 ATTGATCAGAGCACAACAATTCTTGACGTGCAAGGCGTGGGTCTTAAGAACTTCAGCAAA 755
Query 661 TCTGCAAGAGAGCTTCTTCAAAGGCTTTGCAAGATTGACAATGAAAATTACCCTGAGACT 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 756 TCTGCAAGAGAGCTTCTTCAAAGGCTTTGCAAGATTGACAATGAAAATTACCCTGAGACT 815
Query 721 TTGAACCGGATGTTTATCATCAATGCGGGTTCTGGGTTCCGGCTCTTGTGGAGCACAGTT 780
|||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct 816 TTGAACCGGATGTTTATCATCAATGCTGGTTCTGGATTCCGGCTCTTGTGGAGCACAGTT 875
Query 781 AAATCTTTTCTTGATCCCAAAACCACAGCAAAGATCCATGTTCTTGGGAACAAATATCAT 840
|| || |||||||||||||| |||||||||||||| ||||||||||||||||||||||||
Sbjct 876 AAGTCGTTTCTTGATCCCAAGACCACAGCAAAGATTCATGTTCTTGGGAACAAATATCAT 935
Query 841 AGCAAATTGCTTGAAGTCATTGATGCTAGTGAATTGCCAGAGTTCTTTGGAGGTGCTTGC 900
||||||||||| || ||||| ||||||||||||||||| |||||||||||||||||||||
Sbjct 936 AGCAAATTGCTCGAGGTCATCGATGCTAGTGAATTGCCTGAGTTCTTTGGAGGTGCTTGC 995
Query 901 ACTTGTGAAGACAAAGGAGGTTGTATGCGCTCTGACAAAGGTCCATGGAATGATCCTGAG 960
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 996 ACTTGTGAAGACAAAGGAGGTTGTATGCGCTCTGACAAAGGTCCATGGAATGATCCTGAA 1055
Query 961 GTTCTCAAGATCGCTATAAACCGCGAAGCTAAATGCTCACCGATTTCAGAAGATGAACAC 1020
||||||||||||||||||||||| |||||||| || ||||||||||||||||||||||||
Sbjct 1056 GTTCTCAAGATCGCTATAAACCGTGAAGCTAAGTGTTCACCGATTTCAGAAGATGAACAC 1115
Query 1021 AAACATGTAGACCAAGGAAGATCAACTTCAGCTT-CGGAAAGTCTTGAGAGAATCAAGAA 1079
|| |||||||||||||||||||||||||||| || || ||||||||||||||||||||||
Sbjct 1116 AAGCATGTAGACCAAGGAAGATCAACTTCAGGTTTCG-AAAGTCTTGAGAGAATCAAGAA 1174
Query 1080 GAAAACCGATGGAGATAATGTGTATGAGAAGCAAATCACTACCATCGACAAGTCAATGAA 1139
||||||||||| |||||||||||||||||||||||| | ||||| |||||||||||| |
Sbjct 1175 GAAAACCGATGAAGATAATGTGTATGAGAAGCAAATTGCAACCATTGACAAGTCAATGGA 1234
Query 1140 TATGGCATGGCCAGCAAAAACTCAGAAAGCTGAAAACTTTCCAATCTCTAAAGGGCTAGA 1199
||||||||||| || ||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1235 TATGGCATGGCTTGCCAAAACTCAGAAAGCTGAAAACTTTCCAATCTCTAAAGGGTTAGA 1294
Query 1200 GTGTTACGTTAGGAAAGGGGCACCCAATAAAGGAGATGGATTACTTGTGGGAGGGGTCAT 1259
||| || |||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1295 GTGCTATGTTAGGAAAGGGGCACCCAAGAAAGGAGATGGATTACTTGTGGGAGGGGTCAT 1354
Query 1260 GGCCTTTGTGATGGGCATTGTTGCAATGGTTAGGCTATCAAAAGACGTTCCACGCAAACT 1319
||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct 1355 GGCCTTTGTGATGGGAATAGTTGCAATGGTTAGGCTATCAAAAGACGTTCCACGCAAACT 1414
Query 1320 CACTGAGGCTGCTTTATATGGAAACTCAGTTTGTTATGAAGAATCTACAAAGTCTAAGCA 1379
||| |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct 1415 CACCGAGGCTGCTTTATATGGAAACTCAGTCTGTTATGAGGAATCTACAAAGTCTAAGCA 1474
Query 1380 GAATCAAGGTCAATTCGCAGCACCAGTCTCGAGCTCTGAGTATATGTTGATGGTGAAACG 1439
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1475 GAATCAAGGTCAATTCGCAGCACCAGTCTCGAGCTCTGAATATATGTTGATGGTGAAACG 1534
Query 1440 TATGGCTGAGCTGGAAGATAAGTGCATGTTCCTTGACTTGAAACCTGCTCATGTCGAATC 1499
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1535 TATGGCTGAGCTGGAAGATAAGTGCATGTTCCTTGACTTGAAACCTGCTCATGTCGAATC 1594
Query 1500 TGAGAAAGAGGAGAAACTTCAGGCCGCGCTTAATCGTGTTCAAGTGCTTGAGCAAGAGTT 1559
||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1595 TGAGAAAGAAGAGAAACTTCAGGCCGCGCTTAATCGCGTTCAAGTGCTTGAGCAAGAGTT 1654
Query 1560 GACTGAGACCAAGAAGGCTTTGGAAGAAGCTCTTGTGAGCCAGAAGGAGATTTTGGCATA 1619
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1655 GACTGAGACCAAGAAGGCTTTGGAAGAAGCACTTGTGAGCCAGAAGGAGATTTTGGCATA 1714
Query 1620 CATCGagaaaaagaagaagaagaagaagCTGTTTTTCGGGTTCTAA 1665
||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1715 CATCGAGAAAAAGAAGAAGAAGAAGAAGCTGTTTTTCGGATTCTAA 1760
> AT2G16380.1 | Symbols: | Sec14p-like phosphatidylinositol transfer
family protein | chr2:7085784-7089157 FORWARD LENGTH=2055
Length=2055
Score = 837 bits (453), Expect = 0.0
Identities = 920/1140 (81%), Gaps = 53/1140 (5%)
Strand=Plus/Plus
Query 1 ATGGCTGAGACCAAACCTGAAATAGAG-ATGTCGGAGGA-AGAGAGGAAGATAGTGAAGA 58
|||||||| ||||||| || || ||| || || ||||| || |||||| |||||||||
Sbjct 113 ATGGCTGACACCAAACAAGATATGGAGAAT-TCAGAGGATGGA-AGGAAGCTAGTGAAGA 170
Query 59 TGTGCTCG-TTGAAGA-AGAAAGCGATAAATGCATCAAACAGATTCAAGAACTCATTCAA 116
|| ||||| || || | |||||||||||| |||||||| |||||||||||||| |||||
Sbjct 171 TGAGCTCGCTT-AA-ACAGAAAGCGATAAGCGCATCAAATAGATTCAAGAACTCTTTCAA 228
Query 117 GAAAAAAG-GTCGGAGAAGCAGCAGCAGGGTCATGTCCGT-GCCGATTGAGGACGACATT 174
| || ||| |||||| | |||||||| | ||||||| ||| || | ||||||||
Sbjct 229 G-AAGAAGACTCGGAGGACCAGCAGCAAAATTGTGTCCGTAGCCAATACA-GACGACATC 286
Query 175 GACGCAGAAGATCT-TCAAGCT-C-TTGATGCTTTTCGTCAAGCT-CTTGTCCTTGACGA 230
||| || ||| | || | | | | || || || ||||||| | || |||||||||||
Sbjct 287 AACGGGGACGAT-TATC-TG-TCCGTGGAAGCGTTCCGTCAAG-TCCTCGTCCTTGACGA 342
Query 231 GCTCTTGCCATCCAAACTCGATGATCTCCACATGATGCTTC-GATTCTTGAGGGCAAGAA 289
|| ||||| |||||| ||||||||| |||||||||| || ||||||| ||||| ||||
Sbjct 343 CCTTTTGCCCCCCAAACACGATGATCTTCACATGATGC-TCAGATTCTTAAGGGCGAGAA 401
Query 290 AGTTTGACATTGAGAAAGCTAAGCAGATGTGGAGTGACATGATTCAATGGAGGAAAGATT 349
| ||||||| |||||||| ||||| ||||||||||||||| |||||||||||| ||||
Sbjct 402 AATTTGACAAAGAGAAAGCAAAGCAAATGTGGAGTGACATGCTTCAATGGAGGATGGATT 461
Query 350 TCGGCGCT-GACACAATCATTGAGGATTTTGAGTTCGAAGAAATCGATGAAGTGA-TGAA 407
|||| | | || ||||||||||||||||| ||||| ||||| |||||| |||| | | ||
Sbjct 462 TCGGAG-TCGATACAATCATTGAGGATTTCGAGTTTGAAGAGATCGATCAAGT-ACTCAA 519
Query 408 GCACTACCCTCAAGGCTATCACGGAGTAGACAAGGAAGGCAGACCAGTTTACATTGAGAG 467
|| || || ||||| || || ||||| ||||| |||||||| || ||||||||||||||
Sbjct 520 ACATTATCCGCAAGGTTACCATGGAGTGGACAAAGAAGGCAGGCCGGTTTACATTGAGAG 579
Query 468 ATTAGGTCAAATCGATGCTAACAAGCTACTCCAAGTGACAACAATGGACCGGTACGTGAA 527
|||||||||||||||||| |||||||| | |||| ||| |||||||||||||| | |||
Sbjct 580 ATTAGGTCAAATCGATGCAAACAAGCTGTTACAAGCGACTACAATGGACCGGTATGAGAA 639
Query 528 ATATCATGTCAAAGAGTTCGAGAAGAC-TTTCAAGGTCAAGTTTCCTTCTTGTTCTGTCG 586
||| ||||| |||||||||||||||| ||| ||| ||||||| |||||||| |||| ||
Sbjct 640 ATACCATGTGAAAGAGTTCGAGAAGATGTTT-AAGATCAAGTTCCCTTCTTGCTCTGCCG 698
Query 587 CAGCGAATAAGCATATTGATCAGAGCACAACAATTCTTGACGTGCAAGGCGTGGGGCTTA 646
|||| || ||||| ||||| || |||||||| ||| |||| || ||||| ||||||||||
Sbjct 699 CAGCCAAGAAGCACATTGACCAAAGCACAACCATTTTTGATGTCCAAGGAGTGGGGCTTA 758
Query 647 AGAACTTCAGCAAATCTGCAAGAGAGCTTCTTCAAAGGCTT-TGCAAGATTGACAATGAA 705
||||||||| |||||| || |||||||| ||||| | ||| | |||||| || |||||
Sbjct 759 AGAACTTCAACAAATCCGCGAGAGAGCTGCTTCAGCGCCTTCT-CAAGATCGATAATGAC 817
Query 706 AATTACCCTGAGACTTTGAACCGGATGTTTATCATCAATGCGGGTTCTGGGTTCCGGCTC 765
||||||||||||||||||||| | ||||| ||||||||||| ||| |||| |||||||||
Sbjct 818 AATTACCCTGAGACTTTGAACAGAATGTTCATCATCAATGCTGGTCCTGGATTCCGGCTC 877
Query 766 TTGTGGAGCAC-AGTTAAATCTTTTCTTGATCCCAAAACCACAGCAAAGATCCATGTTCT 824
|||||| || | | ||||| || || ||||| ||||| ||| ||||||| ||||||||
Sbjct 878 TTGTGG-GCTCCAATTAAAAAGTTCCTCGATCCAAAAACGACATCAAAGATTCATGTTCT 936
Query 825 TGGGAACAAATATCATAGC-AAATTGCTTGAAGTCATTGATGCTAGTGAATTGCCAGAGT 883
|||||||||||| || | | |||||||| |||| ||| || ||||| || |||||| | |
Sbjct 937 TGGGAACAAATACCA-ACCCAAATTGCTCGAAGCCATAGACGCTAGCGAGTTGCCATATT 995
Query 884 TCTTTGGAGGTGCTT-GCACTTGTGAAGACAAAGGAGGTTGTATGCGCTCTGACAAAGGT 942
||||||| || ||| | ||||||| ||||||||| || ||| |||| |||||||||||
Sbjct 996 TCTTTGGCGGC-CTTTGTACTTGTGCAGACAAAGGTGGCTGTTTGCGATCTGACAAAGGC 1054
Query 943 CCATGGAATGATCCTGAGGTTCTCAAGATCGCTATAAACCGC-GAAGCTAAATGCTC-AC 1000
|||||||||||||||||| |||| ||||| |||| |||| | ||||| | || ||| ||
Sbjct 1055 CCATGGAATGATCCTGAGCTTCTTAAGATAGCTAGGAACC-CTGAAGCCAGATTCTCGAC 1113
Query 1001 CGATTTCAGAAGATGAAC-ACAAACATGTAGACCAAGGAAGATCAACT-TC-A-G--CTT 1054
|||||||| || || | || | |||||| |||||| ||||| | || | | |||
Sbjct 1114 A-ATTTCAGAGGAAGA-CTACTTGCTTGTAGAAGAAGGAACATCAA-TGTCGATGGTCTT 1170
Query 1055 CGGAAAGTCTTGAGAGAATCAAGAAGAAAACCGATGGA-GATAATGTGTA-TGAGAAGCA 1112
| || ||| ||||||| ||||| ||||||| || || || |||||| | |||||||||
Sbjct 1171 TG-AACCTCTAGAGAGAAACAAGATGAAAACC-ATCGAAGAGAATGTG-AGTGAGAAGCA 1227
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 82278693255
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5