BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg888778 Length=1059 Score E Sequences producing significant alignments: (Bits) Value AT4G33140.1 | Symbols: | Haloacid dehalogenase-like hydrolase ... 1528 0.0 > AT4G33140.1 | Symbols: | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein | chr4:15981405-15984351 FORWARD LENGTH=1521 Length=1521 Score = 1528 bits (827), Expect = 0.0 Identities = 1001/1078 (93%), Gaps = 39/1078 (4%) Strand=Plus/Plus Query 1 ATGTTAAAGAGGCACTCTAACGCCATTCTCTTCAGAATCGCCAGCTTCTTCGATTCACAT 60 ||||||||||||||||||| ||||||||||| ||||||||| || ||||||||| | Sbjct 244 ATGTTAAAGAGGCACTCTATCGCCATTCTCTCCAGAATCGCAAG---CTTCGATTC-C-- 297 Query 61 CATAAAACCCTTTTTATGTCTTCCTTTACCGATCCCCTTTTTCTGCGATCGCTTCACACT 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||| || || Sbjct 298 CATAAAACCC---TTATGTCTTCCTTTACCGATCCCCTTTTTCTGCGATCGCTTTACTCT 354 Query 121 CCTCGATCCATCGCCAACACATTTCATGGAGATGGAGATTTCGTTCATAGACTC-AC--T 177 |||||||||||||||| || ||||||||||||| ||| | |||||||||| || | Sbjct 355 CCTCGATCCATCGCCATCAGATTTCATGGAGAT-----TTT-GCTCATAGACTCTACAAT 408 Query 178 CCCATTCAAATTTACCTCAACCACAACAACAAGAGT--CGCTT-TAATGGTTTGTTCAAG 234 ||||||||||||||| |||| |||||||||| ||| | ||| |||||||||||||||| Sbjct 409 CCCATTCAAATTTACAACAACAACAACAACAACAGTGGCTCTTGTAATGGTTTGTTCAAG 468 Query 235 GTTAAAGGTGGAGGAGTTAAGCCCAATGGATTCACCTTGACAAGTTGTTGTTTTGATTCT 294 |||||||||||||||| ||||| || |||||||||||| | | |||||||||||||| Sbjct 469 GTTAAAGGTGGAGGAGGAAAGCCGAAAGGATTCACCTTG-C--GAAGTTGTTTTGATTCT 525 Query 295 CACAAGAACCCTGATCAAAAGGCTCGAGCTTTAACTCAACATCGCCGCCTTCTCCATGAT 354 || ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 526 CATAAGAAACCTGATCAAAAGGCTCGAGCTTTAACTCAACATCGCCGCTTTCTCCATGAT 585 Query 355 CTCGGATCTGGGCC---T-----A------G-TGCCGGAACCACCGACCTTGCAGATGGC 399 || ||||||||||| | | | ||||||||| ||||||||||| |||||| Sbjct 586 CTGGGATCTGGGCCTAGTGAAGAACGCGCCGCTGCCGGAACTACCGACCTTGCCGATGGC 645 Query 400 CGTGGTGCATATCTGCGTACCAGGTTTCGAGGAAATGATAAGATTGTTGTGGCTGTTGAC 459 |||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| Sbjct 646 CGTGGTGCATATCTGCGTACGAGGTTTCAAGGAAATGATAAGATTGTTGTGGCTGTTGAC 705 Query 460 ATTGATGAGGTTCTTGGAAACTTTGTCTCGGCCCTTAACAGATTCATTGCGGACCGCTAT 519 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 706 ATAGATGAGGTTCTTGGAAACTTTGTCTCGGCCCTTAACAGATTCATTGCGGACCGCTAT 765 Query 520 TTGTCTAACCATTCAGTCTCAGAATACCATGTCTATGAGTTCTTCAAGATATGGAACTGC 579 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 766 TTGTCGAACCATTCAGTCTCAGAATACCATGTCTATGAGTTCTTCAAGATATGGAACTGC 825 Query 580 TCTCGCAACGAAGCCGACTTACGTGTTCATGAATTCTTTAAGACATCATATTTCAAGAAA 639 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 826 TCTCGCAACGAAGCCGACTTACGTGTTCATGAATTCTTTAAGACATCATATTTCAAGAAA 885 Query 640 GGGATCCATCCTCTTCCAGGTGCCCATAAGACTCTTCACAAGCTATCAAAATATTGCGAC 699 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 886 GGGATCCATCCTCTTCCAGGTGCCCATAAGACTCTTCACAAGCTATCAAAATATTGCGAC 945 Query 700 ATGTCAGTTGTGACGTCCCGGCAGAATGCGATAAAGGAGCACACACTTGAGTGGATCGAG 759 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 946 ATGTCAGTTGTGACGTCCCGGCAGAATGCGATAAAGGAGCACACACTTGAGTGGATCGAG 1005 Query 760 ATACATTTCCCAGGACTATTTAAACAAATTCATTTTGGAAACCATTTTGCTCTTCATGGA 819 ||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||||||| Sbjct 1006 ATACATTTCCCGGGACTATTTAAACAGATTCATTTTGGGAACCATTTTGCTCTTCATGGA 1065 Query 820 GAGTCTAGACCAAAGTCTGAAATCTGCAGATCATTTGGAGCAGAGATATTGATTGACGAT 879 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1066 GAGTCTAGACCAAAGTCTGAAATCTGCAGATCATTTGGAGCAGAGATATTGATTGACGAT 1125 Query 880 AACCCGAGATATGCCGAGGAATGCGCTAACATCGGAATGAAGGTTCTTCTCTTTGACTAT 939 ||||| |||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct 1126 AACCCAAGATATGCCGAGGAATGCGCTAACATTGGAATGAAGGTTCTCCTCTTTGACTAT 1185 Query 940 GAAAATTCATACCCTTGGTCTAAGACAGAGTCTGTGGATAGGCATCCTTTGGTGACTAGA 999 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 1186 GAAAATTCATACCCTTGGTCTAAGACAGAGTCTGTGGATCGGCATCCTTTGGTGACTAGA 1245 Query 1000 GTTCATAACTGGGAAGAGGTGGAGCAGCAGATTCTCTCATTGGCAGTGTCAAAATGTT 1057 |||||||| |||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 1246 GTTCATAATTGGGAAGAGGTGGAGCAGCAGATTCTCTCATTGGCAGTGTCAAAGTGTT 1303 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 51857162985 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5