BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg888825

Length=375
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT4G32785.1 | Symbols:  | CONTAINS InterPro DOMAIN/s: Pleckstri...   604    1e-172


> AT4G32785.1 | Symbols:  | CONTAINS InterPro DOMAIN/s: Pleckstrin-like, 
plant (InterPro:IPR013666), Pleckstrin homology (InterPro:IPR001849); 
BEST Arabidopsis thaliana protein match 
is: FORKED 1 (TAIR:AT3G63300.1); Has 35333 Blast hits to 34131 
proteins in 2444 species: Archae - 798; Bacteria - 22429; 
Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other 
Eukaryotes - 9610 (source: NCBI BLink). | chr4:15811066-15811872 
FORWARD LENGTH=524
Length=524

 Score =  604 bits (327),  Expect = 1e-172
 Identities = 359/375 (96%), Gaps = 0/375 (0%)
 Strand=Plus/Plus

Query  1    ATGACTTTTGTCTCTAGAGGAGAAGAGCTTCTCAAACGCACCCGCAAAGGGGATCTTCAT  60
            |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  21   ATGACTTTCGTCTCTAGAGGAGAAGAGCTTCTCAAACGCACCCGCAAAGGGGATCTTCAT  80

Query  61   TGGAAGCAAGTATCTTTTAACATCAATTCAAATTGGCAAGTGGTTCTTAAAATGAAGAGC  120
            ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct  81   TGGAAGCAAGTATCTTTTAACATCAATTCCAATTGGCAAGTGGTTCTTAAAATGAAGAGC  140

Query  121  AAACATGTAGGTGGAACTTTCACAAAGACGAAGAAATGCGTGGTCAATGGAGTGTGCCGA  180
            |||||||| |||||||||||||| ||||||||||||||||| ||||||||||||||||||
Sbjct  141  AAACATGTGGGTGGAACTTTCACGAAGACGAAGAAATGCGTTGTCAATGGAGTGTGCCGA  200

Query  181  GATATACCCGAATGGGCACATAGAGGACGAGCAGAAAAAATGGTCGAACGAAGAGCCTAC  240
            ||||||||||||||||||||||||||||||||||| |||||||| || ||||||||||||
Sbjct  201  GATATACCCGAATGGGCACATAGAGGACGAGCAGATAAAATGGTAGAGCGAAGAGCCTAC  260

Query  241  TTTGGGGTGAAAACAGTGGAAAGGCTGATTGAGTTCGAATGTGGAAACAAAAGAGAGAAG  300
            |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||
Sbjct  261  TTTGGGGTGAAAACAGTGGAAAGGGTGATTGAATTCGAATGTGGAAACAAAAGAGAGAAG  320

Query  301  CAAATGTGGATAGAGGGGATTCAGCAGCTGCTAAACTCACTTGAAATCGGATCTAGTGTT  360
            ||||||||||||||||||||||| ||| |||| |||||||| |||||||| |||||||||
Sbjct  321  CAAATGTGGATAGAGGGGATTCAACAGTTGCTTAACTCACTCGAAATCGGTTCTAGTGTT  380

Query  361  CACTGGAAACATTAG  375
            || ||||||||||||
Sbjct  381  CAATGGAAACATTAG  395



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 17643979899


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5