BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg888917 Length=2034 Score E Sequences producing significant alignments: (Bits) Value AT4G31980.1 | Symbols: | unknown protein; CONTAINS InterPro DO... 3049 0.0 AT2G25190.1 | Symbols: | PPPDE putative thiol peptidase family... 433 4e-120 > AT4G31980.1 | Symbols: | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF247, plant (InterPro:IPR004158), Protein of unknown function DUF862, eukaryotic (InterPro:IPR008580); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF247) (TAIR:AT5G11290.1); Has 1967 Blast hits to 1844 proteins in 183 species: Archae - 0; Bacteria - 6; Metazoa - 223; Fungi - 83; Plants - 1477; Viruses - 0; Other Eukaryotes - 178 (source: NCBI BLink). | chr4:15464905-15469204 FORWARD LENGTH=2043 Length=2043 Score = 3049 bits (1651), Expect = 0.0 Identities = 1921/2050 (94%), Gaps = 23/2050 (1%) Strand=Plus/Plus Query 1 ATGTTTTGTC-GAAACGTCTCGGTGAGGCGGAAGAAGAAATCTGGTTCGGTTCCGGTTTA 59 |||||||| | ||||||| |||||||||||||||||||| |||||| |||| |||||||| Sbjct 1 ATGTTTTG-CAGAAACGTATCGGTGAGGCGGAAGAAGAATTCTGGTACGGTACCGGTTTA 59 Query 60 TCTGAATGTGTACGATCTTACCCCAATGAATGTTTATGGTTACTGGCTCGGAATTGGGAT 119 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 60 TCTGAATGTTTACGATCTTACCCCAATGAATGTTTATGGTTACTGGCTCGGAATTGGGAT 119 Query 120 CTATCACTCTGGTCTTGAAGTTCATGGGGTTGAATATGGATACGGGGCACACGAGCATTC 179 ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| | || Sbjct 120 CTATCACTCTGGTCTCGAAGTTCATGGGGTTGAGTATGGATACGGGGCACACGAGAAATC 179 Query 180 GAGCTCGGGAATCTTTGAAGTTGAGCCAAAGAAGTGTCCTGGTTTCACGTTCAGGAAATC 239 ||||||||| || ||||| || |||||||||||||||||||||||||| ||||||||||| Sbjct 180 GAGCTCGGGGATTTTTGAGGTGGAGCCAAAGAAGTGTCCTGGTTTCACATTCAGGAAATC 239 Query 240 GATTCTTGTGGGTGAAACAGAGATGAGGGCTAAAGAAGTTAGAACCTTTATGGAGAAATT 299 ||||||||| |||||||||||||||| ||||||||||||| ||| ||||||||||||||| Sbjct 240 GATTCTTGTTGGTGAAACAGAGATGAAGGCTAAAGAAGTTCGAAGCTTTATGGAGAAATT 299 Query 300 ATCAGAAGAGTATCAGGGAAACAAATACCATCTCATCACAAGGAACTGCAACCATTTCTG 359 |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| Sbjct 300 ATCAGAAGAGTATCAGGGTAACAAGTACCATCTCATCACAAGGAACTGCAACCATTTCTG 359 Query 360 CAACCATGTTTGTTTGAAACTAACTCA-AAACTCAATCCCTAGTTGGGTCAACCGTCTTG 418 ||||||||||| ||||||||| ||||| ||| |||||||||||||||||||||||||||| Sbjct 360 CAACCATGTTTCTTTGAAACTTACTCACAAA-TCAATCCCTAGTTGGGTCAACCGTCTTG 418 Query 419 CTCGCTTAGGTTTCCTCTGCAACTGTGTGTTGCCGGCTTGCTTGAACGAGACTaaagtga 478 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 419 CTCGCTTAGGTTTCCTCTGCAACTGTGTCTTGCCGGCTTGCTTGAACGAGACTAAAGTGA 478 Query 479 agagggtaggaaaagacgggaa---gctcttggaaggagaaagtaagaagaag-agaa-a 533 || ||||||||||||||||||| ||||||||||||||||| || ||||||| |||| | Sbjct 479 AGCGGGTAGGAAAAGACGGGAAGCTGCTCTTGGAAGGAGAAAATACGAAGAAGAAGAAGA 538 Query 534 -gaagaag-aaa-gcg-agaagCCGATCAGGTCCGTTATCTTCGTCTTCTTCAAATTCAA 589 ||||||| ||| || ||||||||||||||||| ||||||||||||||||||||| ||| Sbjct 539 GGAAGAAGAAAATACGAAGAAGCCGATCAGGTCCTTTATCTTCGTCTTCTTCAAATGCAA 598 Query 590 GGTTAGATAATAATCCTACACATAACAGATCAAAATCAACGGGTAATCCTCCTCTTTCTT 649 | |||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 599 GATTAGATAATACTCCTACACATAACAGATCAATATCAACGGGTAATCCTCCTCTTTCTG 658 Query 650 CTTCTCCGTCTTGTCCAATGAGACCTCGAGTTCCTTGTGTTGCATCTGGAGCTCAAGATC 709 ||||||| |||||||| ||||||||||| |||||| |||||||||||||||| |||||| Sbjct 659 CTTCTCCATCTTGTCCTTTGAGACCTCGACTTCCTTCTGTTGCATCTGGAGCTGAAGATC 718 Query 710 AGAAGCCTCCAAGCCATATTA-AT-AATGCCAGCTTCTGCAGTGAAGTGCAATGTCA-CG 766 | || |||||||| || | || | || ||||||||||||||||||||||||||||| || Sbjct 719 AAAATCCTCCAAG-CAGA-TACCTCAACGCCAGCTTCTGCAGTGAAGTGCAATGTCACCG 776 Query 767 TGCTTTGCTTTGCATATGAGAGGATGAATCAGAATGAAGGTGACGCCCTTGTAGATTCCA 826 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 777 -GCTTTGCTTTGCATATGAGAGGATGAATCAGAATGAAGGTGACGCCCTTGTCGATTCCA 835 Query 827 TCAAAGCAAAGTTAGACTTTTTGTCATCTCTTTCAACCAAATGCTGTATATACAAGGTAC 886 ||||||| ||||||| |||||| || |||||||| ||||||||||||||||||||||||| Sbjct 836 TCAAAGCGAAGTTAGCCTTTTTATCTTCTCTTTCCACCAAATGCTGTATATACAAGGTAC 895 Query 887 CTAATAAGCTCCGTAGACTCAATCCTGATGCATATACGCCTCGGCTTGTGTCTTTTGGCC 946 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 896 CTAATAAGCTCCGCAGACTCAATCCTGATGCATATACGCCTCGGCTTGTGTCTTTTGGCC 955 Query 947 CGCTACATCGTGGTAAAGAAGAGCTTCAAGCTATGGAAGATCATAAATACAGGTATTTGC 1006 |||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 956 CGCTTCATCGTGGTAAAGAAGAGCTTCAAGCTATGGAAGATCAGAAATACAGGTATTTGC 1015 Query 1007 AGAGTTTTATCCCTAGAACAAACTCTAGTCTAGAGGACCTTGTTAGAGTTGCTAGGACTT 1066 |||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||| Sbjct 1016 TGAGTTTTATCCCTAGAACGAACTCTAGTCTAGAGGACCTTGTTAGACTTGCTAGGACTT 1075 Query 1067 GGGAACAAAATGCTCGCAGCTGTTACGCAGAAGATGTGAAACTTAATAGCGATGAGTTTG 1126 ||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| Sbjct 1076 GGGAACAAAATGCTCGCAGCTGTTATGCAGAAGATGTGAAACTTCATAGCGATGAGTTTG 1135 Query 1127 TT-ATGATGTTAGTTGTAGATGGTAGCTTCCTGGTTGAACTTCTTTTGAGGTCTCATTAT 1185 || | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 1136 TTGA-GATGTTAGTTGTAGATGGTAGCTTCTTGGTTGAACTTCTTTTGAGGTCTCATTAT 1194 Query 1186 CCTCGGCTTAGAGGCGAGAATGATCGGATATTTGGGAATTCAATGATTATCACTGACGTG 1245 ||||| |||||||||||||||||||| |||||||| ||||||||||| ||||| |||||| Sbjct 1195 CCTCGACTTAGAGGCGAGAATGATCGCATATTTGGCAATTCAATGATGATCACCGACGTG 1254 Query 1246 TGCCGTGACATGATTTTGATCGAAAATCAGTTACCCTTTTTCGTTCTAAAGGAGATATTT 1305 |||||||||||||||||||| |||||||||||||||||||||||| | |||||||||||| Sbjct 1255 TGCCGTGACATGATTTTGATAGAAAATCAGTTACCCTTTTTCGTTGTGAAGGAGATATTT 1314 Query 1306 CTTCTCTTGTT-TATATACTACCAACAAGGAACACCTTCAATCACACAGCTAGCGCAACG 1364 ||||||||||| || |||||||||||||||||||||||||||| |||||| |||||||| Sbjct 1315 CTTCTCTTGTTGAAT-TACTACCAACAAGGAACACCTTCAATCATACAGCTCGCGCAACG 1373 Query 1365 CCACTTCAGTTATTTCTTGAGCCGCATTGATGATGAGAAGTTTATTTCAGAGCCAGAACA 1424 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 1374 CCACTTCAGTTATTTCTTGAGCCGCATTGATGATGAGAAGTTTATTACAGAGCCAGAACA 1433 Query 1425 TTTTGTTGATCTTCTGAGGTCTTGTTATCTGCCACTGGTTCCAATTAGATTGGAATACAC 1484 ||||||||||||||||||||||||||||||||||| | ||||||||| ||| |||||||| Sbjct 1434 TTTTGTTGATCTTCTGAGGTCTTGTTATCTGCCACAGTTTCCAATTAAATTAGAATACAC 1493 Query 1485 TACATTGAAAGTGGACAATGCACCTGAAGCAACAGAGCTTCACACTGCTGGTGTTAGGTT 1544 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1494 TACAGTGAAAGTGGACAATGCACCTGAAGCAACAGAGCTTCACACTGCTGGTGTTAGGTT 1553 Query 1545 CAAGCCAGCAGAGAGCACTAGTTGTTTACTTGACATTAGTTTTGCTGATGGAGTACTGAA 1604 |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct 1554 CAAGCCAGCAGAGACCAGTAGTTGTTTACTTGACATTAGTTTTGCTGATGGAGTACTGAA 1613 Query 1605 GATTCCAACCATTGTCGTCGATGATCTCACGGAGTCCCTCTACAGAAACATCATTGTGTA 1664 ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| || Sbjct 1614 GATTCCAACCATTGTCGTCGATGATCTCACGGAATCCCTCTACAAAAACATCATTGGGTT 1673 Query 1665 TGAACAATGTCATTGCTCAAATAAGAACTTCCTCCACTACACCACACTGCTCGGTTGCTT 1724 ||||||||||| |||||||||||| ||||||||| |||||| || |||||||||||||| Sbjct 1674 TGAACAATGTCGTTGCTCAAATAAAAACTTCCTCGACTACATCATGCTGCTCGGTTGCTT 1733 Query 1725 CATTAAATCCCCTACAGATGCTGACTTGCTCATCCGCAGTGGGATCATCGTGAACCATCT 1784 ||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| |||| Sbjct 1734 CATTAAATCCCCTACAGATGCTGACTTGCTCATCCACAGTGGGATCATCGTAAACTATCT 1793 Query 1785 GGGGAACTCAGTAGATGTTTCGAAGTTGTTCAATAGCATCAGCAAAGAGGTTATCTATGA 1844 |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| Sbjct 1794 CGGGAACTCAGTAGATGTTTCAAACTTGTTCAATAGCATCAGCAAAGAGGTTATCTATGA 1853 Query 1845 CAGAAGATTCTACTTTTCGACACTCTCTGAGAACCTTCAAGCTTACTGCAACACACCATG 1904 |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 1854 CAGAAGATTCTACTTTTCGATGCTCTCTGAGAACCTTCAAGCTTACTGCAACACACCATG 1913 Query 1905 GAATAGGTGGAAGGCAATTCTGAGACGTGACTACTTCCACAATCCTTGGTCAGTTGCTTC 1964 ||| ||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| Sbjct 1914 GAACAGGTGGAAGGCGATTCTGAGACGTGACTACTTCCACAATCCTTGGGCAGTTGCTTC 1973 Query 1965 TGTGTTTGCTGCTTTACTTCTTCTCCTTCTCGCTTTCATTCAGGCTGTATGCTCTATCTT 2024 ||| ||||| ||||||||||||||||||||| ||||||| ||| | |||||||||||||| Sbjct 1974 TGTTTTTGCAGCTTTACTTCTTCTCCTTCTCACTTTCATACAGTCCGTATGCTCTATCTT 2033 Query 2025 GGCTTTGTAA 2034 |||| ||||| Sbjct 2034 GGCTCTGTAA 2043 > AT2G25190.1 | Symbols: | PPPDE putative thiol peptidase family protein | chr2:10733946-10735699 FORWARD LENGTH=1237 Length=1237 Score = 433 bits (234), Expect = 4e-120 Identities = 527/662 (80%), Gaps = 45/662 (7%) Strand=Plus/Plus Query 18 CTCGGTGAGGCGGAAGAAGAAATCTGGTTCGGTTCCGGTTTATCTGAATGTGTACGATCT 77 |||||| | |||||||||| |||| ||||| |||||||||||||||||||| |||||||| Sbjct 259 CTCGGTTAAGCGGAAGAAGCAATCCGGTTCTGTTCCGGTTTATCTGAATGTCTACGATCT 318 Query 78 TACCCCAATGAATGTTTATGGTTACTGGCTCGGAATTGG-GATCTATCACTCTGGTCTTG 136 || || ||||||| ||||||||| ||||| ||| |||| | | | ||| |||||| ||| Sbjct 319 AACTCCTATGAATGCTTATGGTTATTGGCTTGGACTTGGTG-TTTTTCATTCTGGTGTTG 377 Query 137 AAGTTCATGGGGTTGAATATGGATACGGGGCACACG-AGCATTCGAGCTCGGGAATCTTT 195 |||||||||| |||||||||| || || ||||| | | || || ||| | || || ||| Sbjct 378 AAGTTCATGGAGTTGAATATGCATTTGGAGCACATGAATCA-TCAAGCACAGGTATTTTT 436 Query 196 GAAGTTGAGCCAAAGAAGTGTCCTGGTTTCACGTTCAGGAAATCGATTCTTGTGGGTG-A 254 ||||| || |||||||||||||||||||||||||| |||||||||||||||||||| | | Sbjct 437 GAAGTGGAACCAAAGAAGTGTCCTGGTTTCACGTTTAGGAAATCGATTCTTGTGGG-GAA 495 Query 255 AACAGAGATGAG-GGCTAAAGAAGTTAGAACCTTTATGGAGAAATTATCAGAAGAGTATC 313 ||| || || | || ||||||||| | ||||||||||||||| | |||||||||| Sbjct 496 AACCGACTTG-GTTGCGAAAGAAGTTCGTGTTTTTATGGAGAAATTAGCTGAAGAGTATC 554 Query 314 AGGGAAACAAATACCATCTCATCACAAGGAACTGCAACCATTTCTGCAACCATGTTTGT- 372 | |||||||| |||||||||||||||||||||||||||||||| ||||| | |||||| Sbjct 555 AAGGAAACAAGTACCATCTCATCACAAGGAACTGCAACCATTTTTGCAATGAAGTTTGTC 614 Query 373 TTGAAACTAACTCA-AAACTCAATCCCTAGTTGGGTCAACCGTCTTGCTCGCTTAGGT-T 430 || ||||| |||| ||| ||||||||||| ||||| || || |||||||||||||| | Sbjct 615 TT-AAACTTGCTCAGAAA-TCAATCCCTAGATGGGTGAATCGACTTGCTCGCTTAGGGGT 672 Query 431 TCCTCTGCAACTGTGTGTTGCCGGCTTGCTTGAACGAGACTaaagtgaagagg-gtagga 489 || |||||||||||||||| || || | ||||||||| | ||||||| || | |||||| Sbjct 673 TC-TCTGCAACTGTGTGTTACCACCTCGTTTGAACGAGGCAAAAGTGA-GACGAGTAGGA 730 Query 490 aaagacgggaagctcttggaaggagaaagtaagaagaagagaaagaagaagaaagcgaga 549 |||| | || ||| || | | | || || ||||||||| || ||||| | ||| Sbjct 731 AAAG--GAGA-GCT-TTCG--G-A-AA-GTGAGAAGAAGA-AACTAAGAA-AC--CGATC 777 Query 550 agCCGATCAGGTCCGTTATCT-TCGTCTTCTTCAAATTCAAGGTTA---GATAATAATCC 605 | | |||||| ||| ||| || || |||||| | |||| | | |||||| ||| Sbjct 778 A-C-GATCAGATCCTTTA-CTGTCTTCTTCTCCGTCTTCATCGACACCTGATAATCATCG 834 Query 606 T--ACACATAACAGATCAAAATCAACG-GGTAATCCTCCT-CTT-T-CTTCTTCTCCGTC 659 | |||||| | || ||||||||| | ||||||| |||| ||| | |||||||| |||| Sbjct 835 TTCACACATT-C-GAGCAAAATCAA-GTGGTAATCATCCTTCTTCTTCTTCTTCTTCGTC 891 Query 660 TT 661 || Sbjct 892 TT 893 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 100802694360 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5