BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg888994 Length=1179 Score E Sequences producing significant alignments: (Bits) Value AT4G31240.1 | Symbols: | protein kinase C-like zinc finger pro... 1879 0.0 > AT4G31240.1 | Symbols: | protein kinase C-like zinc finger protein | chr4:15176455-15178768 REVERSE LENGTH=1708 Length=1708 Score = 1879 bits (1017), Expect = 0.0 Identities = 1126/1180 (95%), Gaps = 2/1180 (0%) Strand=Plus/Plus Query 1 ATGGCAGTATCAACTGATTACCAAGTTAAGTTTCCTGAAAGTGGTGATCTTTACTCTATA 60 |||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 348 ATGGCAGTATCAGCTGATTACCAAGTTAAGTTTCCTGAAAGTGGTGATCTCTACTCTATA 407 Query 61 CTAGCAGCTGAAGGGATTGAGTTTCTTTTGTCGCATAGTGGAGAGGTGCCGTTGGAATAT 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 408 CTAGCAGCTGAAGGGATTGAGTTTCTTTTGTCGCATAGTGGAGAGGTGCCGTTGGAATAT 467 Query 121 ATTCATGGGAAGACGATTTGTCTCTTCTTCTCTGCAAACTGGTGCAGGCCTTGCAAGGAC 180 |||||||| |||||||||||||||||||||||||||| |||||||||||| ||||||||| Sbjct 468 ATTCATGGTAAGACGATTTGTCTCTTCTTCTCTGCAATCTGGTGCAGGCCCTGCAAGGAC 527 Query 181 TTCACTCCAGAGCTGGTAAAACTCTACGAAAATCTTCA-AACCCGAGGAGAAGAACTCGA 239 ||||||||||||||| |||||||||||||||||||||| || |||||||||||||||||| Sbjct 528 TTCACTCCAGAGCTGATAAAACTCTACGAAAATCTTCAGAA-CCGAGGAGAAGAACTCGA 586 Query 240 GATCATCTTTGTCTCATTTGATCATGATATGACTTTATTCTATGAACATTTCTGGTGCAT 299 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 587 GATCATCTTTGTCTCATTTGATCATGATATGACTTCATTCTATGAACATTTCTGGTGCAT 646 Query 300 GCCATGGCTCGCAGTCCCCTTCAATTTAAACCTACTCAACAAATTAAGGGACAAGTACAG 359 ||||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||| | Sbjct 647 GCCATGGCTTGCAGTTCCCTTCAATTTAAGCCTACTCAACAAATTAAGGGACAAGTACGG 706 Query 360 AATTTCTCGTATCCCGTCACTGGTTCCTCTATATTCAGATGAAATCTCAGTCGCTGAAGA 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 707 AATTTCTCGTATCCCGTCACTGGTTCCTCTATATTCAGATGAAATCTCAGTCGCTGAAGA 766 Query 420 TGTAATTGGTCTAATTGAAGACTATGGTCCTGAAGCATTTCCTTTCACTAAAAAGAGAAA 479 |||||||||||||||||||||||||||| ||||||| |||||||||||||||||| |||| Sbjct 767 TGTAATTGGTCTAATTGAAGACTATGGTTCTGAAGCCTTTCCTTTCACTAAAAAGCGAAA 826 Query 480 AGCAGAACTCAAAGCTATCGATGACTCCAAACGCATTGGCGGACAATTGGAGAAACTCCT 539 || |||||||||||| |||||||||||||||||| |||| ||||| |||||||||||||| Sbjct 827 AGAAGAACTCAAAGCCATCGATGACTCCAAACGCCTTGGAGGACAGTTGGAGAAACTCCT 886 Query 540 TACTCATGAGTCCCGAAATTACGTTGTTGCCAGAAATGGAAGTAAGGTGCTAGTTTCTAA 599 |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 887 TACTCACGAGTCCCGAAATTACGTTGTTGCCAGAAATGGAAGCAAGGTGCTAGTTTCTAA 946 Query 600 ACTAGTGGGCAAGACTATAGGGTTGTACTTTGGTGCCCACTGGTGTCCGCCTTTTCGATC 659 ||| ||||| ||||| |||||||||||||||||||| ||||||||||||||||| ||||| Sbjct 947 ACTTGTGGGAAAGACCATAGGGTTGTACTTTGGTGCACACTGGTGTCCGCCTTTCCGATC 1006 Query 660 TTTCACTTCTCAGCTCCTGGATGTGTACAATGAGCTCGCGACCAGAGATAAAGGCTCCTT 719 |||||||||||| ||| | ||||||||||||||||| ||||| | ||||||||||||||| Sbjct 1007 TTTCACTTCTCAACTCGTAGATGTGTACAATGAGCTGGCGACTACAGATAAAGGCTCCTT 1066 Query 720 TGAAGTCATCTTAGTTTCAACAGACAGAGACTCAAGAGAGTTTAACATCAACATGACCAA 779 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1067 TGAAGTCATCTTAATTTCAACAGACAGAGACTCAAGAGAGTTTAACATCAACATGACCAA 1126 Query 780 CATGCCATGGCTTGCAATACCTTATGAGGACAGAACAAGACAAGACCTTTGTAGAATCTT 839 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 1127 CATGCCATGGCTTGCAATACCTTATGAGGACAGAACAAGACAAGATCTTTGTAGAATCTT 1186 Query 840 CAGCATCAAACTCATACCTGCATTGGTCATCATAGGACCGGAAGAGAAAACAGTGACCAC 899 || | |||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 1187 CAACGTCAAACTCATACCTGCATTGGTCATCATAGGACCCGAAGAGAAAACAGTGACCAC 1246 Query 900 AAACGCAAGAGAGATGGTATCGTTGTATGGATCAAGGAGTTTCCCATTCACAGAATCAAG 959 |||||| |||||||||||||| |||||||||||||||||||| || ||||| |||||||| Sbjct 1247 AAACGCGAGAGAGATGGTATCATTGTATGGATCAAGGAGTTTTCCGTTCACGGAATCAAG 1306 Query 960 GATTGTTGAGTTAAAAGCTTGTTTGAAGAAAGAAGGTGATTCACTTCCAAGGAAAGTGAA 1019 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 1307 GATTGTTGAGTTAAAAGCTTGTTTGAAGAAGGAAGGTGATTCACTTCCAAGGAAAGTGAA 1366 Query 1020 GGATAAGAAGCATGAACATGAGCTAAAGCTGGATATGGCGAAAGCTTATGTGTGTGATTT 1079 ||||| ||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct 1367 AGATAACAAGCATGAACACGAGCTAAAACTGGATATGGCGAAAGCTTATGTGTGTGATTT 1426 Query 1080 CTGTAAGAAGCAAGGCAGGTTTTGGGCGTTTTCTTGCGATGCTTGCGATTATGATCTTCA 1139 ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct 1427 CTGTAAGAAGCAAGGCAGGTTTTGGGCGTTTTCTTGCAATGCTTGTGATTATGATCTTCA 1486 Query 1140 TCCTACATGTGTGGAAGAACAAGACGCATTGTTGGTTTAG 1179 ||||||||||||||||||| |||| ||||| ||||||||| Sbjct 1487 TCCTACATGTGTGGAAGAAGAAGAAGCATTATTGGTTTAG 1526 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 57881228385 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5