BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg889101 Length=297 Score E Sequences producing significant alignments: (Bits) Value AT5G07280.1 | Symbols: EMS1, EXS | Leucine-rich repeat transmem... 403 4e-112 > AT5G07280.1 | Symbols: EMS1, EXS | Leucine-rich repeat transmembrane protein kinase | chr5:2285040-2288686 FORWARD LENGTH=3647 Length=3647 Score = 403 bits (218), Expect = 4e-112 Identities = 258/278 (93%), Gaps = 0/278 (0%) Strand=Plus/Plus Query 1 ATGACAAAGAGAGTGAAACAAAGAGATGATCCAGAGCGAATGGAGGAAAGCATATTAAAA 60 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| ||| Sbjct 2605 ATGACAAAGAGAGTGAAGCAAAGAGATGATCCAGAGCGAATGGAGGAAAGCAGATTGAAA 2664 Query 61 GAGTTTGTTGAACAGAACCTCTACTTCTTAAGTGGAAGCAGATCAAGAGAGCCATTAAGC 120 | ||||||||| |||||||| || ||||||||||||||||||||||| ||||| |||||| Sbjct 2665 GGGTTTGTTGATCAGAACCTGTATTTCTTAAGTGGAAGCAGATCAAGGGAGCCTTTAAGC 2724 Query 121 ATCAATATAGCAATGTTCGAGCATCCGCTTCTGAAGATGCGTTTAGGAGATATTATTGAG 180 ||||||||||||||||||||||| |||||||||||| ||||||||||||||||| | ||| Sbjct 2725 ATCAATATAGCAATGTTCGAGCAGCCGCTTCTGAAGGTGCGTTTAGGAGATATTGTCGAG 2784 Query 181 GGTACAAATCATTTCTCTAAGAAGAACATCATAGGAGACGGTGGTTTTGGGACGAATTAC 240 | |||| |||||||||||||||||||||| |||||||||||||||||||||||| |||| Sbjct 2785 GCTACAGATCATTTCTCTAAGAAGAACATTATAGGAGACGGTGGTTTTGGGACGGTTTAC 2844 Query 241 AAAGCTTGTTTACCAGGTGGGAAAACAATAGCGGTGAA 278 ||||||||||||||||||| ||||||| |||||||||| Sbjct 2845 AAAGCTTGTTTACCAGGTGAGAAAACAGTAGCGGTGAA 2882 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 13723095477 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5