BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg889111
Length=2835
Score E
Sequences producing significant alignments: (Bits) Value
AT4G30110.1 | Symbols: HMA2, ATHMA2 | heavy metal atpase 2 | ch... 3707 0.0
AT2G19110.1 | Symbols: HMA4, ATHMA4 | heavy metal atpase 4 | ch... 1683 0.0
> AT4G30110.1 | Symbols: HMA2, ATHMA2 | heavy metal atpase 2 |
chr4:14720241-14724584 REVERSE LENGTH=2875
Length=2875
Score = 3707 bits (2007), Expect = 0.0
Identities = 2328/2483 (94%), Gaps = 22/2483 (1%)
Strand=Plus/Plus
Query 1 ATGGCGTCGAAGAAGATGACCAAGAGTTACTTCGATGTTCTTGGAATTTGCTGTACATCG 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 8 ATGGCGTCGAAGAAGATGACCAAGAGTTACTTCGATGTTCTTGGAATTTGCTGTACATCG 67
Query 61 GAGGTTCCGTTGATTGAGAACATTCTCAAATCCATGGACGGTGTTAAAGAATACTCTGTT 120
|||||||||||||| ||||| |||||||| |||||||||||||||||||||| |||||||
Sbjct 68 GAGGTTCCGTTGATCGAGAATATTCTCAATTCCATGGACGGTGTTAAAGAATTCTCTGTT 127
Query 121 ATTGTTCCGTCAAGAACCGTCATCGTCGTCCACGACACTCTCATCCTCTCCCAGTTCCAA 180
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 128 ATTGTTCCGTCAAGAACCGTCATCGTCGTCCACGACACTCTCATCCTCTCGCAGTTCCAA 187
Query 181 ATCGTGAAAGCACTGAACCAAGCACGGTTAGAAGCAAATGTGAGGGTAACCGGAGAAACA 240
||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 188 ATCGTTAAAGCACTGAACCAAGCACAGTTAGAAGCAAATGTGAGGGTAACCGGAGAAACC 247
Query 241 AATTTCAGGAATAAATGGCCAAGTCCCTTTGCGATGGTTTCCGGCCTACTTCTCCTCCTC 300
||||||| ||||||||||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct 248 AATTTCAAGAATAAATGGCCAAGTCCCTTTGCGGTGGTTTCCGGCATACTTCTCCTCCTC 307
Query 301 TCCTTCTTCAAATACCTTTACTCTCCGTTCCGTTGGCTCGCTGTCGCAGCCGTCGTCGCC 360
|||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||
Sbjct 308 TCCTTCTTCAAATACCTTTACTCTCCCTTCCGTTGGCTCGCTGTCGCAGCCGTTGTCGCT 367
Query 361 GGAATTTATCCAATACTGGCCAAAGCTGTAGCATCCCTTGCAAGGTTTAGAATCGACATC 420
|| |||||||| ||| | ||||||||||||||||| ||||||||||||||||||||||||
Sbjct 368 GGCATTTATCCGATATTAGCCAAAGCTGTAGCATCTCTTGCAAGGTTTAGAATCGACATC 427
Query 421 AACATTCTTGTTATTATAACTGTTGGAGCAACAATTGGTATG-AGAGATTACACAGAAGC 479
|||||||||||| || |||| || |||||||||||||| ||| | |||||||||||||||
Sbjct 428 AACATTCTTGTTGTTGTAACCGTGGGAGCAACAATTGGCATGCA-AGATTACACAGAAGC 486
Query 480 TGGAGTAGTTGTCTTCTTATTCACAATCGCTGAATGGCTCCAGTCAAGAGCTAGCTATAA 539
|| ||||||||||||||| ||||||||||||||||||||||| || ||||||||||||||
Sbjct 487 TGCAGTAGTTGTCTTCTTGTTCACAATCGCTGAATGGCTCCAATCTAGAGCTAGCTATAA 546
Query 540 GGCAAGTGCAGTGATGCAGTCTTTGATGAGTTTAGCTCCACAAAAGGCAATGATTGCAGA 599
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 547 GGCAAGTGCAGTGATGCAGTCTTTGATGAGTTTAGCTCCACAAAAGGCCGTGATTGCAGA 606
Query 600 AACTGGAGAAGAAGTTCAAGTGGATGAGCTCAAGA-TCAACACAGTTATAGCTGTCAAAG 658
||||||||||||||| |||||||||| ||||||| | ||||||||||||||||||||||
Sbjct 607 GACTGGAGAAGAAGTTGAAGTGGATGAACTCAAGACT-AACACAGTTATAGCTGTCAAAG 665
Query 659 CTGGTGAAACCATACCAATTGATGGAGTTGTTGTGGATGGAAACTGTGAAGTTGATGAGA 718
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 666 CTGGTGAAACCATACCAATTGATGGAGTTGTTGTTGATGGAAACTGTGAAGTTGATGAGA 725
Query 719 AAACCTTGACCGGTGAAGCATTCCCCGTGCCTAAACTCAGAGATTCTTCGGTTTGGGCTG 778
|||| |||||||||||||||||||||||||||||||| | |||||| ||||||||||||
Sbjct 726 AAACTTTGACCGGTGAAGCATTCCCCGTGCCTAAACTGAAAGATTCGACGGTTTGGGCTG 785
Query 779 GAACCATCAATCTAAATGGTTACATAAGTGTGAAAACCACTGCTCTAGCTGAGGATTGCG 838
||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||
Sbjct 786 GAACCATCAATCTAAATGGTTACATAACTGTGAACACCACTGCTCTAGCTGAGGATTGCG 845
Query 839 TGGTTGCGAAGATGGCAAAGCTTGTCGAAGAAGCTCAGAACAGCAAAACTGAAACTCAGA 898
||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||
Sbjct 846 TGGTTGCGAAGATGGCAAAACTTGTAGAAGAAGCTCAGAACAGCAAAACCGAAACTCAGA 905
Query 899 GATTTATAGACAAATGTTCCATGTACTATACTCCAGCGATCATCCTGATATCAGTTTGTT 958
|||||||||| |||||||||| ||||||||||||||||||||||||||||||| | ||||
Sbjct 906 GATTTATAGATAAATGTTCCAAGTACTATACTCCAGCGATCATCCTGATATCAATCTGTT 965
Query 959 TTGCGGCTATCCCATTCGCATTGAAGGTTCACAACCTGAAGCATTGGATTCACTTAGCAC 1018
||| |||||||||||| ||||||||||||||||||||||| |||||| ||||||||||||
Sbjct 966 TTGTGGCTATCCCATTTGCATTGAAGGTTCACAACCTGAAACATTGGGTTCACTTAGCAC 1025
Query 1019 TAGTTGTGTTAGTTAGTGCTTGTCCTTGTGGGCTTATCCTCTCGACACCAGTAGCCACTT 1078
||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||
Sbjct 1026 TAGTTGTGTTAGTAAGTGCTTGTCCTTGTGGACTTATCCTCTCCACACCAGTAGCCACTT 1085
Query 1079 TCTGTGCACTCACTAAGGCAGCCACATCAGGACTTTTGATCAAAGGAGCTGATTATCTTG 1138
||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1086 TCTGTGCACTCACAAAGGCAGCCACATCAGGACTTTTGATCAAAGGAGCTGATTACCTTG 1145
Query 1139 AAACTTTAGCCAAGATCAAGGTTGTTGCTTTTGATAAAACCGGGACTATCACTAGAGGCG 1198
|||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
Sbjct 1146 AAACCTTAGCCAAGATCAAGATTGTTGCTTTTGATAAAACCGGGACTATCACTAGAGGTG 1205
Query 1199 AGTTCATCGTCATGGATTTCCAGTCACTTTCTGAAGATATAAGCCTGCACAG-CTTGCTT 1257
||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||
Sbjct 1206 AGTTCATCGTCATGGATTTCCAGTCACTTTCTGAAGATATAAGCCTGCAGAGTCT-GCTT 1264
Query 1258 TACTGGGTATCAAGCGCAGAGAGCAAGTCAAGCCATCCAATGGCTGCTGCACTTGTGGAC 1317
||||||||||||||| | ||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1265 TACTGGGTATCAAGCACTGAGAGCAAGTCAAGCCATCCAATGGCTGCTGCAGTTGTGGAC 1324
Query 1318 TATGCAAAATCTGTCTCTGTTGAACCTAAGCCTGAAGCGGTCGAGGATTACCAGAACTTC 1377
||||||| |||||||||||||||||||||||||||||||||||| || |||||||||||
Sbjct 1325 TATGCAAGATCTGTCTCTGTTGAACCTAAGCCTGAAGCGGTCGAAGACTACCAGAACTTT 1384
Query 1378 CCAGGAGAAGGAATCTATGGGAAGATTGATGGCAAAGAAGTCTATATTGGTAACAAAAGG 1437
||||||||||| || ||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct 1385 CCAGGAGAAGGGATTTATGGGAAGATTGATGGTAAAGAAGTCTATATCGGTAACAAAAGG 1444
Query 1438 ATTGCTTCTAGATCTGGGTGTTCATCAGTTCCAGATGTTGATGTTGATACAAAAGGAGGA 1497
|||||||||||| ||||||||| ||||||||||||| ||||||||||||| |||||||||
Sbjct 1445 ATTGCTTCTAGAGCTGGGTGTTTATCAGTTCCAGATATTGATGTTGATACTAAAGGAGGA 1504
Query 1498 AAGACAATTGGATATGTCTATGTTGGAAAAACACT-GTCAGGTGTTTTCAATCTCTCAGA 1556
||||||||||||||||| ||||||||| ||||||| | | ||||||||||||||||||||
Sbjct 1505 AAGACAATTGGATATGTATATGTTGGAGAAACACTAG-CTGGTGTTTTCAATCTCTCAGA 1563
Query 1557 TGCTTGTAGATCTGGTGTAGCTCAAGCAATGAAAGAATTGAAAGCTTTGGGAATTAAGAC 1616
||||||||||||||||||||||||||| ||||||||| ||||| | |||||||||||||
Sbjct 1564 TGCTTGTAGATCTGGTGTAGCTCAAGCCATGAAAGAACTGAAATCGTTGGGAATTAAGAT 1623
Query 1617 TGCGATGCTGACCGGAGATAATCAAGCCGCTGCAATGCATGCTCAAGAACAGCTTGGGAA 1676
||| ||||| |||||||||||||| ||||||||||||||||||||||||||||| || ||
Sbjct 1624 TGCAATGCTTACCGGAGATAATCATGCCGCTGCAATGCATGCTCAAGAACAGCTAGGAAA 1683
Query 1677 TGCTATGGATATTGTTCGTGCGGAGCTTCTTCCAGAAGGTAAATCTGAAATCATCAAAGA 1736
|||||||||||||||| | || |||||||||||||||| ||||||||||||||| ||| |
Sbjct 1684 TGCTATGGATATTGTTAGAGCAGAGCTTCTTCCAGAAGATAAATCTGAAATCATAAAACA 1743
Query 1737 GTTTATGAGAGAAGAAGGGTCAACAGCTATGGTAGGGGATGGGTTGAATGATGCACCAGC 1796
||| | ||||||||||||| |||| |||||||||||||| ||||||||||||||||||||
Sbjct 1744 GTTAAAGAGAGAAGAAGGGCCAACGGCTATGGTAGGGGACGGGTTGAATGATGCACCAGC 1803
Query 1797 TTTAGCTACAGCGGATATTGGTATCTCAATGGGTGTTTCCGGCTCTGCAATTGCAACAGA 1856
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1804 TTTAGCTACAGCGGATATTGGTATCTCAATGGGTGTTTCCGGCTCTGCACTTGCAACAGA 1863
Query 1857 GACTGGTAATATAATTCTGATGTCCAATGACATCAGAAGAATACCGCAGGCAATCAAA-C 1915
|||||||||||||||||||||||||||||| |||||||||||||||||||| || ||| |
Sbjct 1864 GACTGGTAATATAATTCTGATGTCCAATGATATCAGAAGAATACCGCAGGCGAT-AAAGC 1922
Query 1916 TTGCGAGAAGAGCGAAAAGGAAAGTGGTGGAGAACGTGGTCACATCGATCACTATGAAAG 1975
|||| | ||||||||||||||||||||||||||| ||||||| ||| |||||||||||||
Sbjct 1923 TTGCAAAAAGAGCGAAAAGGAAAGTGGTGGAGAATGTGGTCATATCAATCACTATGAAAG 1982
Query 1976 GAGCTATTCTTGCGTTGGCATTTGCCGGTCATCCGCTGATTTGGGCAGCTGTACTTGTTG 2035
||||||||||||| ||||||||||| |||||||||||||||||||||||||| |||| |
Sbjct 1983 GAGCTATTCTTGCATTGGCATTTGCTGGTCATCCGCTGATTTGGGCAGCTGTTCTTGCAG 2042
Query 2036 ATGTAGGAACTTGTCTGCTTGTGATCCTCAATAGCATGTTGTTGCTCAGTGATAACCATA 2095
|||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||
Sbjct 2043 ATGTAGGAACTTGTCTGCTTGTGATCCTTAATAGCATGTTGTTGCTCAGTGATAAACATA 2102
Query 2096 AAACTGGAAACAAATGTTATAGGGAGTCTTCTTCTTCTTC--TAT-AGT-G-G-AGAAAC 2149
||||||||||||||||||||||||||||||||||||| || | | | | | | ||||||
Sbjct 2103 AAACTGGAAACAAATGTTATAGGGAGTCTTCTTCTTCCTCGGTTTTAATCGCGGAGAAAC 2162
Query 2150 TTGAAGGTGATGCTGCTGGGGACATGGAAGCAGGCTTATTACCAAAGATCAGCGATAAGC 2209
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 2163 TTGAAGGTGATGCTGCTGGGGACATGGAAGCAGGCTTATTACCAAAGATCAGTGATAAGC 2222
Query 2210 ATTGCAAGTCAGGCTGCTGTGGAACGAAGACTCAAGTGAAAGTGATGCAACCAGCTAAAT 2269
|||||||| | ||||| ||||||||||||||||||| ||||| |||| |||||||||||
Sbjct 2223 ATTGCAAGCCGGGCTGTTGTGGAACGAAGACTCAAGAGAAAGCGATGAAACCAGCTAAAG 2282
Query 2270 CCAGTTCGGACCATAGTCACTCTGGTTGTTGTGAGAAGAAACAGAAAGACAATGTAACGG 2329
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 2283 CCAGTTCGGACCATAGTCACTCTGGTTGTTGTGAGACGAAACAGAAAGACAATGTAACGG 2342
Query 2330 TTGTGAAAAAGAGCAGTTGTGCAGAACCTGTTGATTTAGTACAAGGCCATGACTCAGGGT 2389
|||||||||||||| |||||||||||||||||||||||| ||| ||||||||||||||||
Sbjct 2343 TTGTGAAAAAGAGCTGTTGTGCAGAACCTGTTGATTTAGGACATGGCCATGACTCAGGGT 2402
Query 2390 GTTGTGGTAACAAGAGTCAACAACCAAATCAACACGAGGTGCAA---CAA-A--GCTGTC 2443
|||||||| ||||||||||||||||| | ||||||||||||||| ||| | ||||||
Sbjct 2403 GTTGTGGTGACAAGAGTCAACAACCACACCAACACGAGGTGCAAGTGCAACAAAGCTGTC 2462
Query 2444 ATAACAAGCCATCTGGCCTGGAC 2466
|||||||||||||||||||||||
Sbjct 2463 ATAACAAGCCATCTGGCCTGGAC 2485
Score = 309 bits (167), Expect = 9e-83
Identities = 219/245 (89%), Gaps = 0/245 (0%)
Strand=Plus/Plus
Query 2380 GACTCAGGGTGTTGTGGTAACAAGAGTCAACAACCAAATCAACACGAGGTGCAACAAAGC 2439
|||||||||||||||||| |||||||||||| ||| | ||||||||| |||||||||||
Sbjct 2483 GACTCAGGGTGTTGTGGTGGCAAGAGTCAACAGCCACACCAACACGAGTTGCAACAAAGC 2542
Query 2440 TGTCATAACAAGCCATCTGGCCTGGACATTGGAACTGGCTCACAACATGAAGGTTCTTCA 2499
|||||| |||||||||||||||||||||||||||||||| || |||| ||||||||||||
Sbjct 2543 TGTCATGACAAGCCATCTGGCCTGGACATTGGAACTGGCCCAAAACACGAAGGTTCTTCA 2602
Query 2500 ACCGTAGTCAATCTGGAAGGAGATGAGCAAGAGGAAGTAAAAGTCTCGGTCAAAGGTTGT 2559
|| | ||||||||||| || |||| | |||||||| | ||||||| |||||| |||| |
Sbjct 2603 ACATTGGTCAATCTGGAGGGGGATGCGAAAGAGGAACTGAAAGTCTTGGTCAATGGTTTT 2662
Query 2560 TGTTCAAGTCCTGCTGATCTCGCGGTAACTAGCTTGAAAGTGAAGAGCGATGGACATAGC 2619
|||||||||||||||||||||||| |||||||||||||||||||||||||| | ||| ||
Sbjct 2663 TGTTCAAGTCCTGCTGATCTCGCGATAACTAGCTTGAAAGTGAAGAGCGATAGCCATTGC 2722
Query 2620 AAGTC 2624
|||||
Sbjct 2723 AAGTC 2727
Score = 202 bits (109), Expect = 2e-50
Identities = 133/145 (92%), Gaps = 0/145 (0%)
Strand=Plus/Plus
Query 2691 TTGCAAGTCTAACTGTAGCAGCAGAGAGAAGAGCCACCATGGTAGCAGCTGTAGCAGGAG 2750
||||||||||||||||||||||||||||| | |||||||||| |||| |||| | |||||
Sbjct 2719 TTGCAAGTCTAACTGTAGCAGCAGAGAGAGGTGCCACCATGGCAGCAACTGTTGTAGGAG 2778
Query 2751 CTATGCTAAAGAGTGTTGCAGTCACCATCACCACCACACAAGGGCTAATGGCATTGGAAG 2810
||| ||||||||| ||||||||||| |||||||||||||||||||| ||||| ||||||
Sbjct 2779 CTACGCTAAAGAGAGTTGCAGTCACGATCACCACCACACAAGGGCTCATGGCGTTGGAAC 2838
Query 2811 CTTGAAAGAGATTGTGATTGAATAG 2835
|||||||||||||||||||||||||
Sbjct 2839 CTTGAAAGAGATTGTGATTGAATAG 2863
> AT2G19110.1 | Symbols: HMA4, ATHMA4 | heavy metal atpase 4 |
chr2:8278881-8286445 FORWARD LENGTH=3812
Length=3812
Score = 1683 bits (911), Expect = 0.0
Identities = 1896/2360 (80%), Gaps = 114/2360 (5%)
Strand=Plus/Plus
Query 9 GAAGAAGATGAC-CAAGAGTTACTTCGATGTTCTTGGAATTTGCTGTACATCGGAGGTTC 67
||||||| || | |||||||||||||||||||| ||||| || ||||||||||| ||||
Sbjct 142 GAAGAAGTTG-CAAAAGAGTTACTTCGATGTTCTCGGAATCTGTTGTACATCGGAAGTTC 200
Query 68 CGT-TGATTGAGAACATTCTCAAATCCA-TGGACGGTGTTAAAGAATACTCTGTTATTGT 125
| | | || ||||| |||||||| | || | ||||| ||||||||||| || || || ||
Sbjct 201 C-TATAATCGAGAATATTCTCAAGT-CACTTGACGGCGTTAAAGAATATTCCGTCATCGT 258
Query 126 TCCGTCAAGAACCGTCATCGTCGTCCACGACA--CT-CTCATCCTCTCCCAGTTCCAAAT 182
||| || |||||||| || || || ||||||| || ||||| ||||||| ||||||||
Sbjct 259 TCCCTCGAGAACCGTGATTGTTGTTCACGACAGTCTCCTCAT-CTCTCCC--TTCCAAAT 315
Query 183 CG-TGAAAGCACTGAACCAAGC-ACGGTTAGAAGCAAATGTGAGGGTAACCGGAGAAACA 240
| | || ||||| ||| |||| | ||||||||||||| |||||||||| |||||||||
Sbjct 316 TGCT-AAGGCACTAAACGAAGCTA-GGTTAGAAGCAAACGTGAGGGTAAACGGAGAAACT 373
Query 241 AATTTCAGGAATAAATGGCCAAGTCCCTTT-G-CGATGGTTTCCGGCCTACTTCTCCTCC 298
| |||| ||| |||||||| || |||||| | || | ||||||||| ||||||||||||
Sbjct 374 AGCTTCAAGAACAAATGGCCGAG-CCCTTTCGCCG-TAGTTTCCGGCTTACTTCTCCTCC 431
Query 299 TCTCCTTCTTCAAA-TACCTTTACTCTCCGTTCCGTTGGCTCGCTGTCGCAGCCGTCGTC 357
| |||||| | ||| | | ||||| || || ||||||||||| || ||||| || | |
Sbjct 432 TATCCTTCCT-AAAGTTTGTCTACTCGCCTTTACGTTGGCTCGCCGTGGCAGCAGTTGCC 490
Query 358 GCCGGAATTTATCCAATACTGGCCAAAG-CTGTAGCATCCCTTGCAAGGTTTAGAATCGA 416
||||| || ||||| || || ||||||| || | || ||| || |||| ||| |||||
Sbjct 491 GCCGGTATCTATCCGATTCTTGCCAAAGCCT-TTGCTTCCATTAAAAGGCCTAGGATCGA 549
Query 417 CATCAACATTCTT-GTTATTATAACTGTTGGA--GCAACAATTGGTATG-AGAGATTACA 472
|||||||| | || || || ||||| | | || |||||| ||| ||| | ||||| ||
Sbjct 550 CATCAACA-TATTGGTCATAATAACCG-T-GATTGCAACACTTGCAATGCA-AGATTTCA 605
Query 473 CAGAAGCTGGAGTAGTTGTCTTCTTATTCA-CA-ATCGCTGAATGGCTCCAGTCAAGAGC 530
|| || | || |||||| ||| |||||| || ||| | || |||||| | |||||||
Sbjct 606 TGGAGGCAGCAGCAGTTGTGTTCCTATTCACCATATC-C-GACTGGCTCGAAACAAGAGC 663
Query 531 TAGCTATAAGGC-AAGTGCAGTGATGCAGTCTTTGATGAGTTTAGCTCCACAAAAGGCAA 589
|||||| ||||| | | | || ||||||||| ||||||| ||||||||||||||||| |
Sbjct 664 TAGCTACAAGGCGACCT-CGGTAATGCAGTCTCTGATGAGCTTAGCTCCACAAAAGGCTA 722
Query 590 TGATTGCAGAAACTGGAGAAGAAGTTCAAGTGGATGAGCTCAAGATCAACACAGTTATAG 649
| || ||||| ||||| ||||||||| |||| |||||| | ||| | | |||||| |||
Sbjct 723 TAATAGCAGAGACTGGTGAAGAAGTTGAAGTAGATGAGGTTAAGGTTGATACAGTTGTAG 782
Query 650 CTGTCAAAGCTGGTGAAACCATACCAATTGATGGAGTTGTTGTGGATGGAAACTGTGAAG 709
| || |||||||||||||||||||||||||||||| |||| ||||||||||||||||| |
Sbjct 783 CAGTTAAAGCTGGTGAAACCATACCAATTGATGGAATTGTGGTGGATGGAAACTGTGAGG 842
Query 710 TTGATGAGAAAACCTTGACCGGTGAAGCATTCCCCGTGCCTAAACTCAGAGATTCTTCGG 769
| || ||||||||||| || || |||||||| || |||||||||| ||||||||| | |
Sbjct 843 TAGACGAGAAAACCTTAACGGGCGAAGCATTTCCTGTGCCTAAACAGAGAGATTCTACCG 902
Query 770 TTTGGGCTGGAACCATCAATCTAAATGGTTACATAAGTGTGAAAACCACTGCTCTAGCTG 829
|||||||||||||||| |||||||||||||||||| |||||||||| ||| || |||| |
Sbjct 903 TTTGGGCTGGAACCATTAATCTAAATGGTTACATATGTGTGAAAACAACTTCTTTAGCGG 962
Query 830 AG-GATTGCGTGGTTGCGAAGATGGCAAAGCTTGTCGAAGAAGCTCAGAACAGCAAAACT 888
| ||||| ||||||||||| ||||| ||||| || ||||||||||||| ||| |||||
Sbjct 963 -GTGATTGTGTGGTTGCGAAAATGGCTAAGCTAGTAGAAGAAGCTCAGAGCAGTAAAACC 1021
Query 889 GAAA-CTCAGAGATTTATAGACAAATGTTC-CATGTACTATACTCCAGCGATCATCCT-G 945
||| |||||||| | |||||||||||||| || ||||||||||||||| |||||| | |
Sbjct 1022 -AAATCTCAGAGACTAATAGACAAATGTTCTCA-GTACTATACTCCAGCAATCATCTTAG 1079
Query 946 ATATCAGTTTGTTTTGCGGCTATCCCA-TTCGCATTGAAGGTTCACAACCTGAAGCATTG 1004
|||||| ||| |||| | |||| || || |||||| |||||||| || |||||
Sbjct 1080 -TATCAGCTTGCGTTGCCATTGTCCCGGTTATAAT-GAAGGTCCACAACCTTAAACATTG 1137
Query 1005 GATTC-ACTTAGCACTAGTTGTGTTAGTTAGTGCTTGTCCTTGTGGGCTTATCCTCTCGA 1063
| ||| || ||||| ||||||||||||| |||| |||||| ||||| ||||||||||| |
Sbjct 1138 G-TTCCACCTAGCATTAGTTGTGTTAGTCAGTGGTTGTCCCTGTGGTCTTATCCTCTCTA 1196
Query 1064 CACCAGTAGCCACTTTCTGTGCACTCACTAAGGCAGCCACATCAGGACTTTTGATCAAAG 1123
||||||| || |||||||||||||| ||||| || || || ||||| ||| ||||||||
Sbjct 1197 CACCAGTTGCTACTTTCTGTGCACTTACTAAAGCGGCAACTTCAGGGCTTCTGATCAAAA 1256
Query 1124 GAGCTGATTATCTTGA-A-ACTTTAGCCAAGATCAAGGTTGTTGCTTTTGATAAAACCGG 1181
| |||||||||||||| | ||| | | ||||||||| |||||||||| |||||||| ||
Sbjct 1257 GTGCTGATTATCTTGACACACTCT--CAAAGATCAAGATTGTTGCTTTCGATAAAACTGG 1314
Query 1182 GACTATCACTAGAGGCGAGTTCATCGTCATGGATTTCCAGTCACTTTCT-GAAGATATAA 1240
|||||| || ||||| |||||||| ||||| |||||| ||||||| ||| || |||||||
Sbjct 1315 GACTATTACAAGAGGAGAGTTCATTGTCATAGATTTCAAGTCACTCTCTAGA-GATATAA 1373
Query 1241 GCCTGCACAGCTTGCTTTACTGGGTATCAAGCGCAGAGAGCAAGTCAAGCCATCCAATGG 1300
||| | |||||||||||||||||||||||| | || ||||| ||||| ||||||||||
Sbjct 1374 ACCTACGCAGCTTGCTTTACTGGGTATCAAGTGTTGAAAGCAAATCAAGTCATCCAATGG 1433
Query 1301 CTGCTGCACTTGTGGACTATGCAAAATCTGTCTCTGTTGAACCTAAGCCTGAAGCGGTCG 1360
| || || | ||||| |||||||||||||| |||||||| |||| |||||||| ||| |
Sbjct 1434 CAGCAACAATCGTGGATTATGCAAAATCTGTTTCTGTTGAGCCTAGGCCTGAAGAGGTTG 1493
Query 1361 AGGATTACCAGAACTTCCCAGGAGAAGGAATCTATGGGAAGATTGATGGCAAAGA-AGTC 1419
|||||||||||||||| ||||| ||||||||||| |||||||||||||| || || | ||
Sbjct 1494 AGGATTACCAGAACTTTCCAGGTGAAGGAATCTACGGGAAGATTGATGGTAACGATA-TC 1552
Query 1420 TAT-ATTGGTAACAAAAGGATTGCTTCTAGATCTGGGTGTTCATCAGTTCCAGATG-TTG 1477
| | ||||| ||||||| ||| |||||| || |||| |||||| |||||||||| | |||
Sbjct 1553 T-TCATTGGGAACAAAAAGATAGCTTCTCGAGCTGGTTGTTCAACAGTTCCAGA-GATTG 1610
Query 1478 ATGTTGATACAAAAGGAGGAAAGACAATTGGATATGTCTATGTTGGAAAAACACT-GTCA 1536
| |||||||| ||||| || ||||| ||||||| |||||||| || ||| ||| | |
Sbjct 1611 AAGTTGATACCAAAGGCGGGAAGACTGTTGGATACGTCTATGTAGGTGAAAGACTAG-CT 1669
Query 1537 GG-TGTTTTCAATCTCTCAGATGCTTGTAGATCTGGTGTAGCTCAAGCAATGAAAGAATT 1595
|| | |||||||||| || |||||||||||||||||||| ||||||||||| |||| |
Sbjct 1670 GGAT-TTTTCAATCTTTCTGATGCTTGTAGATCTGGTGTTTCTCAAGCAATGGCAGAACT 1728
Query 1596 GAAAGCTTTGGGAATTAAGACTGCGATGCTGACCGGAGATAATCAAGCCGCTGCAATGCA 1655
|||| || | ||||| || || || ||||| || ||||||||||||||||| ||||||||
Sbjct 1729 GAAATCTCTAGGAATCAAAACCGCAATGCTAACGGGAGATAATCAAGCCGCGGCAATGCA 1788
Query 1656 TGCTCAAGAACAGCTTGGGAATGCTATGGATATTGTTCGTGCG-GAGCTTCTTCCAGAAG 1714
||||||||||||||| ||||||| | | ||| |||| | || | || |||||||||||||
Sbjct 1789 TGCTCAAGAACAGCTAGGGAATGTTTTAGATGTTGTACATG-GAGATCTTCTTCCAGAAG 1847
Query 1715 GTAAATCT-GAAATCAT-CAAAGAGTTTATGAGAGAAGAAGGGTC-AACAGCTATGGTAG 1771
||| || ||| |||| ||| ||||||| ||| |||| ||| | ||| || |||||||
Sbjct 1848 ATAAGTCCAGAA-TCATACAA-GAGTTTA--AGA-AAGA-GGGACCAACCGCAATGGTAG 1901
Query 1772 GGGATGG-GTTGAATGATGCACCAGCTTTAGCTACAGCGGATATTGGTATCTCAATGGGT 1830
|||| || || ||||||||||||||||||||||||||| |||||||||||||| |||||
Sbjct 1902 GGGACGGTGT-GAATGATGCACCAGCTTTAGCTACAGCTGATATTGGTATCTCCATGGGA 1960
Query 1831 GTTTCCGGCTCTGCAATTGCAACAGAGACTGGTAATATAATTCTGATGTCCAATGACATC 1890
|||| |||||||| |||||||| | ||||||||||| ||||||||||| ||||| ||
Sbjct 1961 ATTTCTGGCTCTGCTCTTGCAACACAAACTGGTAATATTATTCTGATGTCTAATGATATA 2020
Query 1891 AGAAGAATACCGCAGGCAATCAAACTTGCGAGAAGAGCGAAAAGG-AAAGTGGTGGAGAA 1949
||||| ||||| || || | || || ||||||||||| | | | ||||| || || ||
Sbjct 2021 AGAAGGATACCACAAGCGGTGAAGCTAGCGAGAAGAGC-ACGACGCAAAGTTGTTGAAAA 2079
Query 1950 CGTG-GTCACATCGATCACTATGAAAGGAGCTATTCTTGCGTTGGCATTTGCCGGTCATC 2008
|||| ||| |||||||| | | |||| || || || || ||||||||||| |||||||
Sbjct 2080 CGTGTGTCT-ATCGATCATTTTAAAAGCAGGAATACTCGCTTTGGCATTTGCTGGTCATC 2138
Query 2009 CGCTGATTTGGGCAGCTGTACTTGTTGATGTAGGAACTTGTCTGCTTGTGATCCTCAATA 2068
| |||||||||| || || |||||||||||||| ||||||||||||||||| ||||||
Sbjct 2139 CTTTGATTTGGGCTGCGGTTCTTGTTGATGTAGGGACTTGTCTGCTTGTGATTTTCAATA 2198
Query 2069 GCATGTTGTTGCT-CAGTGATAACCATAAA-ACTGGAAACAAA---TGTTATAGGGAGTC 2123
| |||||| |||| | | || || | ||| | ||| |||||| ||||| |||| ||
Sbjct 2199 GTATGTTGCTGCTGC-GAGAGAAGAA-AAAGATTGGGAACAAAAAGTGTTACAGGGCTTC 2256
Query 2124 TTCTTCTTC-TTCTATAGTGGAGAAACTTGAAGGTGATGCTGCT---G--G-GGACATGG 2176
| | ||| || || || | |||||||||||| |||| || | | | |||| | |
Sbjct 2257 TACATCTAAGTTGAATGGTAG-GAAACTTGAAGGCGATGATGATTATGTTGTGGACTTAG 2315
Query 2177 AAGCAGGCTTATTACCAAAGATCAGCGATAAG--CATTGCAAGTCAGGCTGCTGTGGA-A 2233
|||||||||| ||| |||||| | | || | | || ||||| ||| |||| |||||| |
Sbjct 2316 AAGCAGGCTTGTTAACAAAGAGCGG-GA-ATGGTCAATGCAAATCAAGCTGTTGTGGAGA 2373
Query 2234 C--GAAGACTCAAGTGAAAGT-G--ATGC--AA-CCA-GC--TAAATCCAGTTCGGACCA 2282
||| | ||||| ||| || | ||| || ||| | |||| ||||||| || ||
Sbjct 2374 TAAGAAAAATCAAGAGAATGTTGTGATGATGAAACCAAGTAGTAAAACCAGTTCTGATCA 2433
Query 2283 TAGTCACTCTGGTTGTTGTG 2302
| |||| ||||||||||||
Sbjct 2434 TTCTCACCCTGGTTGTTGTG 2453
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 140868775944
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5