BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg889519
Length=2235
Score E
Sequences producing significant alignments: (Bits) Value
AT4G26330.1 | Symbols: UNE17, ATSBT3.18 | Subtilisin-like serin... 2891 0.0
> AT4G26330.1 | Symbols: UNE17, ATSBT3.18 | Subtilisin-like serine
endopeptidase family protein | chr4:13320408-13323461 FORWARD
LENGTH=2241
Length=2241
Score = 2891 bits (1565), Expect = 0.0
Identities = 1779/1884 (94%), Gaps = 8/1884 (0%)
Strand=Plus/Plus
Query 354 TTTCAGGGAACCGCCGGAGGCAAAATCC-ATACCTTCGTCGTGGAAAGGAAATTGCGTCG 412
|||||||||| |||||||||| ||| || ||||||||||| ||||| ||||| |||||||
Sbjct 360 TTTCAGGGAAACGCCGGAGGCGAAA-CCTATACCTTCGTCATGGAACGGAAAATGCGTCG 418
Query 413 GAGGAGAAGAGTTCAATCCTTCCGTACATTGCAACCGTAAATTGATCGGTGCTCGATTTT 472
|||| ||||| || |||| || ||||||||||| |||||||||||||||||||||||||
Sbjct 419 GAGGGGAAGACTTTGATCCATCTGTACATTGCAATCGTAAATTGATCGGTGCTCGATTTT 478
Query 473 ACCTCAGAGGATTCGAAGAGACATATGGACCGATTGACTTTACGCGAGATCCTGAATACC 532
|||||||||||||||||||||| || ||| | ||||||||||||||||||||||||||||
Sbjct 479 ACCTCAGAGGATTCGAAGAGACGTACGGAACAATTGACTTTACGCGAGATCCTGAATACC 538
Query 533 GATCGCCGCGAGATTACCTCGGTCACGGCACACACACAGCTTCAACCGCCGTTGGATCCG 592
||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||
Sbjct 539 GATCGCCGCGAGATTACCTCGGTCACGGCACACACACAGCTTCCACCGCCGTCGGATCCG 598
Query 593 TTGTTCGCAACGTCTCCGGCTTCTCCGGT-TTGGGACGCGGCACTGCTCGTGGCGGAGCT 651
|||||||||| ||||||||||||| |||| || ||||||||||||||||| |||||||||
Sbjct 599 TTGTTCGCAATGTCTCCGGCTTCTTCGGTCTT-GGACGCGGCACTGCTCGCGGCGGAGCT 657
Query 652 CCGTCGGCGAGGCTAGCAGTGTTCAAGACGTGTTGGGGGAAGGATCTGGAAGGTGTTTGC 711
|| | ||| |||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 658 CCATTGGCTAGGCTAGCTGTGTTCAAGACGTGTTGGGGGAAGGATCTGGAAGGTGTTTGC 717
Query 712 ACGGAGGCTGATATCTTGGCAGCTTTCGACGACGCGATCCACAACGGTGTCAACGTGATT 771
||||||||||||||||| |||||||| |||||||| |||||| |||| ||| ||||||||
Sbjct 718 ACGGAGGCTGATATCTTAGCAGCTTTTGACGACGCCATCCACGACGGCGTCCACGTGATT 777
Query 772 TCGGCCTCTTTTGGCTATTCGCCGCCGTTATCTCCGTTTTTCGAGTCGAGCGCAGACATT 831
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 778 TCGGCCTCTTTTGGCTATTCGCCGCCGTTATCTCCGTTTTTCGAGTCGAGCGCAGACATC 837
Query 832 GGGGCTTTTCACGC-GTCGGAGAGAGGAATTAGCGTGGTTTTCTCTGGCGGAAACGATGG 890
|||||||||||||| | ||||||||||||| |||||||| |||||| ||||||||||||
Sbjct 838 GGGGCTTTTCACGCAG-CGGAGAGAGGAATCAGCGTGGTGTTCTCTACCGGAAACGATGG 896
Query 891 GCCTGATCCCGGCGTTGTTCAGAATGTCGCTCCTTGGGCAGTTTCCGTCGCAGCTTCGAC 950
|||||||| || |||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct 897 CCCTGATCCTGGTGTTGTTCAGAATGTCGCTCCTTGGGCGGTTTCTGTCGCAGCTTCGAC 956
Query 951 AGTTGATCGGAGTTTTCCCACCAGAATTGTTATCGACGGCAGTTTCACTCTTACGGGTCA 1010
||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct 957 AGTTGATCGGAGTTTTCCCACCAGAATTGTTATCGACGGTAGTTTCACTCTCACGGGTCA 1016
Query 1011 GAGCTTGATTTCTCAGGAGATCACTGGTACATTAGCTCTTGCAACAACGTATTTCAATGG 1070
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1017 GAGCTTGATTTCTCAGGAGATCACTGGTACATTAGCTCTTGCAACAACGTATTTCAATGG 1076
Query 1071 AGGGGTTTGCAAATGGGAAAACTGGTTGAAGAAATTGGCCAATGGGACAATAATTCTGTG 1130
||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||
Sbjct 1077 AGGGGTTTGCAAATGGGAAAACTGGATGAAGAAATTGGCCAATGAGACAATAATTCTGTG 1136
Query 1131 CTTCTCTACTTTGGGTCCGGTTCAGTTCATTGAAGAGGCACAAGCTGCTGCCATAAGAGC 1190
||| |||||||||||||||||||||||||||||||| |||||||||||||| || |||||
Sbjct 1137 CTTTTCTACTTTGGGTCCGGTTCAGTTCATTGAAGAAGCACAAGCTGCTGCTATTAGAGC 1196
Query 1191 GAACGCATTAGCGCTAATATTTGCAGCCTCACCAACCAAACAGCTCGCTGAAGAAGTAGA 1250
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1197 GAACGCATTAGCGCTAATATTTGCAGCCTCACCAACCAGACAGCTCGCTGAAGAAGTAGA 1256
Query 1251 CATGATCCCAACAGTTCGTGTGGATATTCTTCACGGGACAATGATCAGGAACTATCTTGC 1310
||||||||||||||||||||| ||||||||||| ||||| | ||| ||||||||||||||
Sbjct 1257 CATGATCCCAACAGTTCGTGTTGATATTCTTCATGGGACTAGGATTAGGAACTATCTTGC 1316
Query 1311 TCGTTTGCCTACAGTGCCAATTTTGAAAATTGGACCGAGCAAAACGGTTATTGGAGAGAC 1370
||||| ||||||||||||||| |||||||||||||||||||||||||||| ||||||||
Sbjct 1317 TCGTTCGCCTACAGTGCCAATGGTGAAAATTGGACCGAGCAAAACGGTTATCGGAGAGAC 1376
Query 1371 TACAGCACCCTCCGTTGCATATTTCTCTTCAAGAGGACCTAGCTCACTATCACCTGATAT 1430
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1377 TACAGCACCCTCCGTTGCATATTTCTCTTCAAGAGGACCTAGCTCACTATCACCTGATAT 1436
Query 1431 TCTCAAGCCAGATATTACAGCGCCTGGCATTGGGATATTAGCAGCATGGCCTCATAAAAC 1490
||||||||||||||||||||| ||||||||||||||||||||||||||||||| || |||
Sbjct 1437 TCTCAAGCCAGATATTACAGCTCCTGGCATTGGGATATTAGCAGCATGGCCTCCTAGAAC 1496
Query 1491 TCCACCTACACTGTTACCAGGAGACCACCGATCTATTGAGTGGAATTTCCAGTCGGGAAC 1550
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1497 TCCACCTACTCTGTTACCAGGAGACCACCGATCTATTGAGTGGAATTTCCAGTCGGGAAC 1556
Query 1551 GTCAATGTCATGTCCTCATGTGGCTGGAGTTATGGCGCTTCTCCAGTCAGCTCATCCTGA 1610
|||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1557 TTCAATGTCATGTCCCCATGTGGCTGGAGTTATGGCGCTTCTCCAGTCAGCTCACCCTGA 1616
Query 1611 CTGGTCACCTTCTGCAATCAGAAGCGCTATCATGACCACAGCGTATACAAGAGACACAAC 1670
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1617 CTGGTCACCTTCTGCTATCAGAAGCGCTATCATGACCACAGCGTATACAAGAGACACAAG 1676
Query 1671 CTATGATTTGATCCTGTCTGGTGGGTCGATGAAGTCCACTGACCCCTTTGATATGGGTGC 1730
|||||| |||||||| |||||||| |||||||||||||||||||| |||||||| |||||
Sbjct 1677 CTATGACTTGATCCTCTCTGGTGGTTCGATGAAGTCCACTGACCCGTTTGATATTGGTGC 1736
Query 1731 TGGGCATTTAAACCCTTTGAAAGCCATGGACCCTGGTCTGGTTTACAATACCAAAACCGA 1790
|||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||||
Sbjct 1737 CGGGCATATAAACCCTTTGAAAGCCATGGACCCAGGTCTGGTTTACAATACCAGAACCGA 1796
Query 1791 AGAGTATGTGCTCTTCATGTGCAACATTGGCTACACGGACCAACAAATTAAGTCCATGGT 1850
|| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1797 CGACTATGTGCTCTTCATGTGCAACATTGGCTACACGGACCAAGAAATTAAGTCCATGGT 1856
Query 1851 TCTCCACCCAGAGCCTTCCACAACATGTCTTCCGTCTCACTCGTATCGAACAAATGCAGA 1910
|||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct 1857 TCTCCACCCAGAGCCTTCGACAACATGTCTTCCGTCTCACTCGTACCGAACAAATGCAGA 1916
Query 1911 TTTCAACTATCCGTCTATTACCATACCGAGCTTGAGATTGACCAGGACAATAAAACGTAC 1970
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1917 TTTCAACTATCCGTCTATTACCATACCGAGCTTGAGATTAACCAGGACAATAAAACGTAC 1976
Query 1971 TGTAATCAACGTTGGTCCAAACAAAAACACAGTTTATTTCGTGGACATCATTAGACCCAT 2030
||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1977 TGTAAGCAACGTCGGTCCAAACAAAAACACAGTTTATTTCGTGGACATCATTAGACCCGT 2036
Query 2031 GGGAGTGGAAGTTGTGATCTGGCCGCGGATTCTAGTGTTCTCGAAGTGCCAACAAGAACA 2090
||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 2037 GGGAGTGGAAGTTTTGATCTGGCCGCGGATTCTGGTGTTCTCGAAGTGCCAACAAGAACA 2096
Query 2091 CACATATTATGTAACATTCAAGCCCACTGAGATTTACTCTGGTCGGTATGTATTTGGGGA 2150
| |||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 2097 CTCATATTATGTTACATTCAAGCCCACTGAGATTTTCTCTGGTCGGTATGTATTTGGGGA 2156
Query 2151 GATCATGTGGACAGATGGGTTACATCGAGTTAGAAGTCCGTTGGTTGTCTTCTTGAGCAA 2210
|||||||||||| |||||||||||||||||||||||||| ||||||| |||||||||||
Sbjct 2157 AATCATGTGGACAAATGGGTTACATCGAGTTAGAAGTCCGGTGGTTGTGTTCTTGAGCAA 2216
Query 2211 CGCTAGGCCTTCT-GCAAGCAGTT 2233
|||| || |||| ||||||||||
Sbjct 2217 CGCT-GGTTTTCTTGCAAGCAGTT 2239
Score = 459 bits (248), Expect = 7e-128
Identities = 281/297 (95%), Gaps = 2/297 (1%)
Strand=Plus/Plus
Query 34 ATCTCGTCCGCAAATATTTGGAGATGTTGTTGTAGCAAAGAAGATG-GGAAACAATCGAT 92
||||||||| ||| ||||||||||| ||||||||||||| |||| || ||||||| ||
Sbjct 4 ATCTCGTCCATGAATTTTTGGAGATGTCGTTGTAGCAAAGACGATGCGG-AACAATCCAT 62
Query 93 GTTGTACAGTTACAACAATGGCTTCTCAGGCTTCTCTGCAAAACTCAACGCATCACAAGC 152
|||||||||||||||||||||||||| ||||||||| |||||||||||| || |||||||
Sbjct 63 GTTGTACAGTTACAACAATGGCTTCTTAGGCTTCTCAGCAAAACTCAACTCAACACAAGC 122
Query 153 TACTTCTTTAGCAAAATTGGACCAGGTCATAACGGTTTTCAAGAGCAAAAGCTTGAAGTT 212
| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 123 TGCTTCTTTAGCAAAATTGAACCAGGTCATAACGGTTTTCAAGAGCAAAAGCTTGAAGTT 182
Query 213 GCACACAACAAGGAGCTGGGATTTCTTAGGTCTCGCCGTTGACAATGCCCGTCGTACTCC 272
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 183 GCACACAACAAGGAGCTGGGATTTCTTAGGTCTCGCCGTTGACAATGCCCGTCGTACTCC 242
Query 273 TCCGCCGCAGCTCGCCTATGGATCCGACATTGTCGTCGGAATATTCGATACTGGTCT 329
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 243 TCCGCCGCAGCTCGCCTATGGATCCGACATTGTCGTCGGAATCTTCGATACTGGTCT 299
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 110893003905
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5