BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg889546 Length=186 Score E Sequences producing significant alignments: (Bits) Value AT4G26055.1 | Symbols: | unknown protein; FUNCTIONS IN: molecu... 291 2e-78 > AT4G26055.1 | Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G57080.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr4:13214098-13214429 REVERSE LENGTH=189 Length=189 Score = 291 bits (157), Expect = 2e-78 Identities = 179/189 (95%), Gaps = 3/189 (2%) Strand=Plus/Plus Query 1 ATGAACAATAAATTTGGCCGGAAGAAGCCGACGGGAACACCGTCTCTAGCGTGGTCTACC 60 |||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| || Sbjct 1 ATGAACAATAAATTTGGCGGGAAGAAGCCGACGGGAACACCGTCACTAGCGTGGTCGACA 60 Query 61 GTCGTCGTTGTAGCCTCTCTGCTCGCCGGAGCCTCCGTCGTTCACAATATATACAAGCCA 120 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 GTCGTAGTTGTAGCCTCTCTGCTCGCCGGAGCCTCCGTCGTTCACAATATATACAAGCCA 120 Query 121 GATCTCAGATTACCTCAGATCGAAAGCGATGAAGGAGAC-A-A-GGAGGAGTCTGCAAAC 177 ||||||| ||||||||||||||||| ||||||||||||| | | |||||||||||||||| Sbjct 121 GATCTCACATTACCTCAGATCGAAAACGATGAAGGAGACGAGAAGGAGGAGTCTGCAAAC 180 Query 178 AAAGGTTAA 186 ||||||||| Sbjct 181 AAAGGTTAA 189 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 8199120213 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5