BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg889547 Length=1161 Score E Sequences producing significant alignments: (Bits) Value AT4G26050.1 | Symbols: PIRL8 | plant intracellular ras group-re... 1803 0.0 > AT4G26050.1 | Symbols: PIRL8 | plant intracellular ras group-related LRR 8 | chr4:13210459-13213477 FORWARD LENGTH=1543 Length=1543 Score = 1803 bits (976), Expect = 0.0 Identities = 1102/1162 (95%), Gaps = 11/1162 (1%) Strand=Plus/Plus Query 1 ATGATGGGTTACGAGGAGATGAATCAGATGACAATGACGACAACGGCGATGATGAAGAAT 60 ||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| Sbjct 64 ATGATGGGTTACGAGCAGATGAATCAGATGACAATGACGACAACAGCGATGATGAAGAAT 123 Query 61 TTCAATAAGAGGGGACCGATCAATACTCCACATAAGAAAATGACGAGGAGAAGTGTGTCG 120 | |||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct 124 TACAATAAGAAGGGACTAATCAATACTCCACAGAAGAAAATGACGAGGAGAAGTGTGTCG 183 Query 121 GCCATTGATGGTGGTGCGGCGGCCGCAGCTGCGACTGCTGGAGAAGGAGACCGCCGCCGG 180 || |||||||||||| ||||||||||| ||| ||||||||| ||||| | | Sbjct 184 GCTATTGATGGTGGT---------GCAGCTGCGACGGCTAAAGAAGGAGATCGCCGTCAG 234 Query 181 AATCTCAAGACTCTTGATCTTAGCGGCATGTCCTTGGCTTCTCTCTCGGCCTCTTCTATC 240 ||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 235 AATATCAAGACTCTTGATCTTAGCGGCATGTCCTTGGCTTCTCTCTCTGCCTCTTCTATC 294 Query 241 AACTTAGCTTCAATCTCCAAACTCGATCTCTCCAACAACAATATTCAGAAAATTCCGGAA 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 295 AACTTAGCTTCAATCTCCAAACTCGATCTCTCCAACAACAATATTCAGAAAATTCCGGAA 354 Query 301 TCTCTAGTAGCGAGAATGTTAAATTTGTGGGCATTGGATTTGCAATCCAATCAGCTAAAA 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 355 TCTCTAGTAGCGAGAATGTTAAATTTGTGGGCATTGGATTTGCAATCCAATCAGCTAAAA 414 Query 361 ACTCTTCCAAACTCCATTGGATGTCTTTCCAAACTTAAGTTTCTTAATGTGTCCGGAAAT 420 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 415 ACTCTTCCAAACTCCATTGGATGTCTTTCCAAACTTAAGTTTCTTAATGTCTCCGGAAAT 474 Query 421 TATCTCCAATTTCTCCCCAAAACTATCGAAGATTGCAGATCGCTGGAAGAGCTGAACGCC 480 |||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 475 TATCTCCAATCTCTCCCCAAAACTATAGAAGATTGCAGATCGCTGGAAGAGCTGAACGCC 534 Query 481 AACTTCAACGAGCTTACAAGGCTCCCAGACGCGATAGGATTCGAGCTAACGAATCTGACG 540 |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| Sbjct 535 AACTTCAACGAGCTTACAAGGCTCCCAGACGCGATAGGGTTTGAGCTAACGAATCTGACG 594 Query 541 AAGCTCTCCGTCAACTCCAACAAGCTTGTTCTGTTACCAAACTCCGTTAGCTACTTGACG 600 ||||||||||||||||| |||||||||||||| || |||||||||||||||||||||||| Sbjct 595 AAGCTCTCCGTCAACTCAAACAAGCTTGTTCTCTTGCCAAACTCCGTTAGCTACTTGACG 654 Query 601 TCGCTGCGTGTCCTCGACGCGCGGCTAAACCGGCTTAGTTCCCTCCCTGAGGATCTTGAG 660 ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 655 TCGCTGCGTGTGCTCGACGCGCGGCTAAACCGCCTTAGTTCCCTCCCTGAGGATCTTGAG 714 Query 661 AACCTCGTGAACCTTCAGGTCCTTAACGTTAGCCAGAACTTCCAGCACTTGACGACGTTA 720 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 715 AACCTCGTGAACCTTCAGGTCCTCAACGTTAGCCAGAACTTCCAGCACTTGACGACGTTA 774 Query 721 CCTTACTCCGTTGGGTTGTTGATATCTCTCGTCGAGCTTGACGTTAGTTATAACGGAATT 780 |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| Sbjct 775 CCTTACTCCGTTGGGTTGTTGATATCTCTCGTGGAGCTTGATGTTAGTTATAACGGAATT 834 Query 781 ACGGTTTTACCGGACTCCCTCGGCTGTCTTCGCCGGATTCAGAAGCTCTCTGTGGAGGGT 840 ||||||||||| ||||||||||||||||||||||||||||||||||| || ||||||||| Sbjct 835 ACGGTTTTACCAGACTCCCTCGGCTGTCTTCGCCGGATTCAGAAGCTATCCGTGGAGGGT 894 Query 841 AATCCCCTCATTTCCCCACCTTTTGAAGTGGTGGAACAGGGATTGGAAGCATTGAAGCAG 900 |||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| Sbjct 895 AATCCCCTCATTTCCCCACCATTTGAAGTGGTGGAACAGGGGTTGGAAGCATTGAAGCAG 954 Query 901 TACATGAGCGAGAAAATGACCGAGTCTTATaaaaaaaCTCCGACCAAGAAAAAGTCTTGG 960 || ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 955 TATATGAGCGAGAAGATGACCGAGTCTTATAAGAAAACTCCGACCAAGAAAAAGTCTTGG 1014 Query 961 GGCATTGGTAAGCTCGTCAAGTACGGCCTGAGCTCTTCTCCGGGGAG-AGGAACTGGCCG 1019 ||||||||||||||||| ||||||||||||||||||||||||||||| || | | ||||| Sbjct 1015 GGCATTGGTAAGCTCGTAAAGTACGGCCTGAGCTCTTCTCCGGGGAGGAGTACC-GGCCG 1073 Query 1020 TGGAGACGGGAGGGAAGGCTTCATCAATGTATCCGATTATCGCCAAATCGATGGAATCGC 1079 || |||||||| ||||||||||||||||||||| ||||| ||||||||||| |||||||| Sbjct 1074 TGAAGACGGGAAGGAAGGCTTCATCAATGTATCTGATTACCGCCAAATCGACGGAATCGC 1133 Query 1080 CTCCCCGCGACACGTGTCCCTCTTCAACCCGCGACGCCTTTTGTCTCCACTCTCCGCGTA 1139 ||| |||||||| |||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 1134 CTCACCGCGACATGTGTCCCTCTTCAACCCGCGACGCCTCTTGTCTCCACTCTCCGCGTA 1193 Query 1140 TTTCTCTCCTCCAAGGTATTAG 1161 |||||||||||| ||||||||| Sbjct 1194 TTTCTCTCCTCCTAGGTATTAG 1215 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 56977618575 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5