BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg889762
Length=2199
Score E
Sequences producing significant alignments: (Bits) Value
AT4G24010.1 | Symbols: ATCSLG1, CSLG1 | cellulose synthase like... 3197 0.0
AT4G23990.1 | Symbols: ATCSLG3, CSLG3 | cellulose synthase like... 2427 0.0
AT4G24000.1 | Symbols: ATCSLG2, CSLG2 | cellulose synthase like... 2202 0.0
> AT4G24010.1 | Symbols: ATCSLG1, CSLG1 | cellulose synthase like
G1 | chr4:12466345-12469844 FORWARD LENGTH=2413
Length=2413
Score = 3197 bits (1731), Expect = 0.0
Identities = 2054/2210 (93%), Gaps = 21/2210 (1%)
Strand=Plus/Plus
Query 1 ATGGAG-CGTCACAGCAAA-CACTCGGTCGGCGGC-ACAACCCTCCACACGTGTCATCCC 57
|||||| | ||| || ||| ||||||||| |||| || | ||||||||||||||||||
Sbjct 47 ATGGAGAC-TCATAG-AAAGAACTCGGTCGTCGGCAAC-ATCCTCCACACGTGTCATCCT 103
Query 58 TGCCGGCGCGCCATTCCATACAGAATCTACGCCGTAATCCACACGTGTGGCATCATAGCT 117
||||||||| |||||||||| |||||||||||| || | |||||||||||||||||||||
Sbjct 104 TGCCGGCGCACCATTCCATATAGAATCTACGCCATATTTCACACGTGTGGCATCATAGCT 163
Query 118 CTCATGTATCACCATGTACACTCACTTCTCACAGCAAACAACACTCTAATAACATGTCTT 177
||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||
Sbjct 164 CTCATGTATCACCATGTACACTCACTTGTCACAGCAAACAACACTCTTATAACATGTCTT 223
Query 178 CTCCTCCTCTCCGATATTGTTCTCGCCTTCATGTGGGCAACCACAACTTCCCTCCGGTTA 237
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 224 CTTCTCCTCTCCGATATTGTTCTCGCCTTCATGTGGGCAACCACAACTTCCCTCCGCTTA 283
Query 238 AACCCGGTTCATCGGACCGAGTACCCTGAGAAATATGCAGCTAAACCGGAGGACTTTCCA 297
|||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||
Sbjct 284 AACCCGGTTCATCGGACCGAGTGCCCGGAGAAATATGCAGCTAAACCGGAGGACTTTCCA 343
Query 298 AAGCTGGACGTGTTTATATGCACGGCTGATCCGTACAAGGAGCCTCCGATGATGGTGGTC 357
||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||
Sbjct 344 AAGCTGGACGTGTTTATATGCACGGCTGATCCGTACAAGGAGCCTCCAATGATGGTTGTT 403
Query 358 AACACCGCCTTATCAGTCATGGCTTATGAGTATCCGTCCGATAAGATTTCAGTCTATGTA 417
|||||||| ||||| || |||||||| ||||||||||| |||||||| || || ||||||
Sbjct 404 AACACCGCTTTATCGGTGATGGCTTACGAGTATCCGTCAGATAAGATCTCGGTGTATGTA 463
Query 418 TCGGACGATGGAGGATCTTCGTTGACTTTGTTTGCTCTTGTGGAGGCTGCTAAGTTCTCT 477
||||||||||||||||| ||||||||||| ||||||||| | || |||||||||||||||
Sbjct 464 TCGGACGATGGAGGATCGTCGTTGACTTTCTTTGCTCTTATTGAAGCTGCTAAGTTCTCT 523
Query 478 AAGCATTGGTTGCCCTTTTGCAAGAAGAACAATATTGAAGATCGGTCCCCTGAAGTTTAT 537
||||| ||||||||||||||||||||||| ||| || |||||||||| ||||||||||||
Sbjct 524 AAGCAGTGGTTGCCCTTTTGCAAGAAGAATAATGTTCAAGATCGGTCTCCTGAAGTTTAT 583
Query 538 TTCTCATCAAAGTCACATTCTCAG-AGTGATGAAGCTGAAAATCTTAAGATGATGTACAA 596
||||| ||| |||||||||||| | ||||||||||||||||| ||||||||||||||| |
Sbjct 584 TTCTCTTCAGAGTCACATTCTC-GAAGTGATGAAGCTGAAAACCTTAAGATGATGTACGA 642
Query 597 AGACATGAAGAGTAGAGTAGAACATGTGGTGGAGAGTGGAAAAGTTGAAACTTCGTTTAT 656
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 643 AGACATGAAGAGTAGAGTAGAACATGTGGTGGAGAGTGGAAAAGTTGAAACTGCGTTTAT 702
Query 657 CACATGCGATCAATTTCGTGGGGTATTCGATTTGTGGACAGACAAATTCACTCGTCATGA 716
||||||||| ||||||||||||||||||||||||||||| |||||||||| |||||||||
Sbjct 703 CACATGCGACCAATTTCGTGGGGTATTCGATTTGTGGACCGACAAATTCAGTCGTCATGA 762
Query 717 CCATCCCACAATTATTCAGGTGCTACAAAATAGCGAGACAGATATGGACACTACCA-AAA 775
|||||||||||||||||||||| | ||||||||||||||||||||||||| ||||| |||
Sbjct 763 CCATCCCACAATTATTCAGGTGTTGCAAAATAGCGAGACAGATATGGACAATACCAGAAA 822
Query 776 AGTATATAATGCCAAACCTAATATATGTTTCAAGAGAGAAGAGTAAAGTTTCACCACATC 835
| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 823 A-TATATAATGCCAAACCTAATCTATGTTTCAAGAGAGAAGAGTAAAGTTTCACCACATC 881
Query 836 ATTTCAAAGCCGGTGCTCTTAATACTTTGCTACGAGTATCAGGGGTGATGACAAATTCAC 895
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 882 ATTTCAAAGCTGGTGCTCTTAATACTTTGCTACGAGTATCAGGGGTGATGACAAATTCAC 941
Query 896 CGATCATTCTAACACTAGACTGTGATATGTATTCGAACGACCCTACAACACCGGTTCGTG 955
||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||
Sbjct 942 CGATCATTCTAACACTAGACTGTGATATGTATTCGAACGACCCGGCAACACTGGTTCGTG 1001
Query 956 CTTTATGCTATTTAACAGATCCTGAAATCAAATCCGGTTTAGGTTATGTACAGTTTCCTC 1015
|||| |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct 1002 CTTTGTGCTATTTAACAGATCCTGAAATCAAATCCGGTTTAGGATATGTGCAGTTTCCTC 1061
Query 1016 AGAAATTTCTAGAAATAGGCAAAAATGATATATATGCATGTGAAAACAAACGCCTCTTCA 1075
|||||||||||| |||| ||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1062 AGAAATTTCTAGGAATAAGCAAAAATGATATATATGCTTGTGAAAACAAACGCCTCTTCA 1121
Query 1076 ATATCAATATGGTTGGGTTTGATGGTCTAATGGGTCCGACTCATGTGGGAACTGGTTGTT 1135
||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1122 TTATTAATATGGTTGGGTTTGATGGTCTAATGGGTCCAACTCATGTGGGAACTGGTTGTT 1181
Query 1136 TCTTCAATCGACGGGCTTTTTATGGGCCTCCATCTAAGTTGATTTTACCGGAGATTGATG 1195
|||| |||||||| ||||| ||||| ||||||| || |||||||||||||||||| |||
Sbjct 1182 TCTTTAATCGACGAGCTTTCTATGGACCTCCATATATGTTGATTTTACCGGAGATAAATG 1241
Query 1196 AATTGAGGCCATATCGGATTGCGGATAAGTCTATCAAAGCCCAAGATGTTTTGGCATTAA 1255
|| | | ||| |||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1242 AACTAAAGCCTTATCGGATTGCGGATAAGTCTATCAAAGCCCAAGATGTTTTGTCATTAG 1301
Query 1256 CACACAATGTAGCAGGATGTATCTATGAGTACAATACCAATTGGGGATCCAAGATTGGAT 1315
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1302 CACACAATGTAGCAGGATGTATCTATGAGTACAATACCAATTGGGGATCCAAGATTGGAT 1361
Query 1316 TCAGATATGGGTCATTAGTAGAAGACTACTACACAGGGTTTATGTTCCATTGTGAAGGAT 1375
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1362 TCAGATATGGGTCATTAGTAGAAGACTACTACACAGGGTTTATGCTCCATTGTGAAGGAT 1421
Query 1376 GGAGATCAATATTTTGCAACCCTAAGAAAGCTGCTTTTTATGGAGATTCCTCAAAGTGCT 1435
|||||||| ||||||||||||| || |||||||| ||||||||||||||| ||||||||
Sbjct 1422 GGAGATCAGTATTTTGCAACCCAAAAAAAGCTGCATTTTATGGAGATTCCCCAAAGTGCC 1481
Query 1436 TAGTTGATGTAGTGGGTCAACAAATGCGATGGGCCGTTGGGCTTCTT-GAAATATTGTTT 1494
|||||||| | |||||||||||||| || ||||| ||||||||| || ||||| | |||
Sbjct 1482 TAGTTGATCTTGTGGGTCAACAAATCCGTTGGGCAGTTGGGCTT-TTCGAAATGTCCTTT 1540
Query 1495 TCAAAGAAAAGCCCAATTGTCTATGGATTCAAATCATTAGGGC-TGTTAATGGGCTTATG 1553
|||||| | ||||||||| ||||||| |||| ||| | || | | |||||||| ||| |
Sbjct 1541 TCAAAGTATAGCCCAATTACCTATGGAATCAAGTCACT-GGACCTTTTAATGGGTTTAGG 1599
Query 1554 CTATTGCAACTCTCCGTTTCGGCCATTTTGGTCAATTCCGGTTACCGTCTATGGACTTTT 1613
|||||||||||||||||| |||||||||||||||||| | |||||||||||||||||
Sbjct 1600 TTATTGCAACTCTCCGTTTAAGCCATTTTGGTCAATTCCTCTGACCGTCTATGGACTTTT 1659
Query 1614 ACCTCAGCTTGCACTCATCTATGGAGTTAGTGTCTTCCCCAAGGCATCTGATCCGTGGTT 1673
||| |||||||||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct 1660 ACCACAGCTTGCACTCATTTCTGGAGTTAGTGTCTTCCCCAAGGCATCTGATCCGTGGTT 1719
Query 1674 TTGGCTTTACATCTTTTTATTCTTTGGTGCTTATGCCCAAGATCTATCGGACTTTTTATT 1733
||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||||||
Sbjct 1720 TTGGCTTTACATCATTTTATTCTTTGGGGCTTATGCCCAAGATCTATCAGACTTTTTATT 1779
Query 1734 GGAAGGAGGAACTTATCGGAAATGGTGGAACGATCAAAGAATGGTGATGATAAAAGGACT 1793
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1780 GGAAGGAGGAACTTATCGGAAATGGTGGAACGATCAAAGAATGTTGATGATAAAAGGACT 1839
Query 1794 CTCTTCATTCGTCTTTGGTTTTATAGAGTTCACTCTCAAAACCCTAAACCTCTCTACACC 1853
|||||||||| ||||||||||||||||||||| ||||||||||||||||||||| |||||
Sbjct 1840 CTCTTCATTCTTCTTTGGTTTTATAGAGTTCATTCTCAAAACCCTAAACCTCTCCACACC 1899
Query 1854 TAAGTTCAACATCACCAGTAAAGCCAATGACGATAACGAACAAAGGAAGCGGTACGAGCA 1913
|||||||||| ||||||||||||||||||| ||| ||||||| |||||||||||||||||
Sbjct 1900 TAAGTTCAACGTCACCAGTAAAGCCAATGATGATGACGAACAGAGGAAGCGGTACGAGCA 1959
Query 1914 AGACATATTTGATTTTGGAACCTCTTCGTCCATGTTCTTGCCTTTGACTACGGTTGCCAT 1973
||| || |||||||| |||||||||||||||||||||||||| ||||| |||||||||||
Sbjct 1960 AGAAATCTTTGATTTCGGAACCTCTTCGTCCATGTTCTTGCCCTTGACCACGGTTGCCAT 2019
Query 1974 CGTGAATCTGCTTGCTTTTGTCTGTGGGCTTTATGGTAATCTCTTCTGCGGAGGAGAACT 2033
||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||
Sbjct 2020 AGTGAATCTGCTTGCTTTTGTCTGGGGGCTTTATGGTATTCTCTTCTGCGGAGGAGAACT 2079
Query 2034 CGT-CCTTGAGCTGATGCTGGTGAGCTTTGCGGTGGTGAATTGCTTGCCGATCTACGAGG 2092
| | |||||||||||||||||||||||| ||||||||||||||||| |||||||||| ||
Sbjct 2080 C-TACCTTGAGCTGATGCTGGTGAGCTTCGCGGTGGTGAATTGCTTACCGATCTACGGGG 2138
Query 2093 CTATGGTGTTGAGGAAAGATGATGGAAAATTACCAAAAAGAA-TTAGTTTCTTAGCTGGG 2151
|||||||||||||||||||||||||||||||| ||||||||| || ||||||||||||||
Sbjct 2139 CTATGGTGTTGAGGAAAGATGATGGAAAATTATCAAAAAGAACTT-GTTTCTTAGCTGGG 2197
Query 2152 AACCTC-ACGGTTG-TTCTTATTGTGTCCAGTTACTTCGTCCTCAAGTAA 2199
|||||| ||| ||| ||||||||||||| |||||||||||||||||||||
Sbjct 2198 AACCTCCACG-TTGGTTCTTATTGTGTCAAGTTACTTCGTCCTCAAGTAA 2246
> AT4G23990.1 | Symbols: ATCSLG3, CSLG3 | cellulose synthase like
G3 | chr4:12456489-12460753 FORWARD LENGTH=2513
Length=2513
Score = 2427 bits (1314), Expect = 0.0
Identities = 1940/2235 (87%), Gaps = 72/2235 (3%)
Strand=Plus/Plus
Query 1 ATGGAGCGTCACAGCAAACACTCGGTCGGCGGCACAACCCTCCACACGTGTCATCCCTGC 60
||||||| |||||| |||||||||||||||| |||||||||||||||||||||||| |||
Sbjct 60 ATGGAGCCTCACAGAAAACACTCGGTCGGCGACACAACCCTCCACACGTGTCATCCTTGC 119
Query 61 CGGCGCGCCATTCCATACAGAATCTACGCCGTAATCCACACGTGTGGCATCATAGCTCTC 120
|||||| |||||||||| ||||||||||||||| | |||||||||||||||||||| |||
Sbjct 120 CGGCGCACCATTCCATATAGAATCTACGCCGTATTTCACACGTGTGGCATCATAGCCCTC 179
Query 121 ATGTATCACCATGTACACTCACTTCTCACAGCAAACAAC-ACTCTAATAACATGTCTTCT 179
|||||||||||||||||||||||||||||||||||| || |||||||| || | ||| ||
Sbjct 180 ATGTATCACCATGTACACTCACTTCTCACAGCAAAC-ACAACTCTAATCACGTCTCTCCT 238
Query 180 CCTCCTCTCCGATATTGTTCTCGCCTTCATGTGGGCAACCACAACTTCCCTCCGGT-TAA 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 239 TCTCCTCTCCGATATTGTTCTCGCCTTCATGTGGGCAACCACAACTTCCCTCCGGTATAA 298
Query 239 ACCCGGTTCATCGGACCGAGTACCCTGAGAAATATGCAGCTAAACCGGAGGACTTTCC-A 297
| ||||||| |||||||||||||||||||||||||||||| ||||||||||||| || |
Sbjct 299 A-CCGGTTCGCCGGACCGAGTACCCTGAGAAATATGCAGCTGAACCGGAGGACTTCCCGA 357
Query 298 AAGCTGGACGTGTTTATATGCACGGCTGATCCGTACAAGGAGCCTCCGATGATGGTGGTC 357
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 358 AA-CTGGACGTGTTTATATGCACGGCTGATCCGTACAAGGAGCCTCCGATGATGGTGGTC 416
Query 358 AACACCGCCTTATCAGTCATGGCTTATGAGTATCCGTCCGATAAGATTTCAGTCTATGTA 417
||||| |||||||| || |||||||| |||||||||||||||||||| |||||||| |||
Sbjct 417 AACACTGCCTTATCGGTGATGGCTTACGAGTATCCGTCCGATAAGATCTCAGTCTACGTA 476
Query 418 TCGGACGATGGAGGATCTTCGTTGACTTTGTTTGCTCTTGTGGAGGCTGCTAAGTTCTCT 477
|||||||||||||| || ||||||||||||||||||||| ||||||| ||||||||||||
Sbjct 477 TCGGACGATGGAGGTTCGTCGTTGACTTTGTTTGCTCTTATGGAGGCAGCTAAGTTCTCT 536
Query 478 AAGCATTGGTTGCCCTTTTGCAAGAAGAACAATATTGAAGATCGGTCCCCTGAAGTTTAT 537
|||||||||||||| |||||||||||||| ||| || |||||||||| ||||||||||||
Sbjct 537 AAGCATTGGTTGCCTTTTTGCAAGAAGAATAATGTTCAAGATCGGTCTCCTGAAGTTTAT 596
Query 538 TTCTCATCAAAGTCACATTCTCAGAGTGATGAAGCTGAAAATCTTAAGATGATGTACAAA 597
||||||||||||| || ||||| ||||||||||||||||||| | |||||||||||| ||
Sbjct 597 TTCTCATCAAAGTTACGTTCTCGGAGTGATGAAGCTGAAAATATCAAGATGATGTACGAA 656
Query 598 GACATGAAGAGTAGAGTAGAACATGTGGTGGAGAGTGGAAAAGTTGAAACTTCGTTTATC 657
||||||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||
Sbjct 657 GACATGAAGAGTAGAGTAGAACATGTGGTGGAGAGTGGAAAAGTTGAGACTGCATTTATC 716
Query 658 ACATGCGATCAATTTCGTGGGGTATTCGATTTGTGGACAGACAAATTCACTCGTCATGAC 717
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 717 ACATGCGATCAATTTCGTGGGGTATTCGATTTGTGGACCGACAAATTCACTCGTCATGAC 776
Query 718 CATCCCACAATTATTCAGGTGCTACAAAATAGCGAGACA-GATATGGAC-ACTACCAAAA 775
|||||||||||||||||||||||||||||||| |||| | ||||||||| | ||||||||
Sbjct 777 CATCCCACAATTATTCAGGTGCTACAAAATAGTGAGA-ATGATATGGACGA-TACCAAAA 834
Query 776 AGTATATAATGCCAAACCTAATATATGTTTCAAGAGAGAAGAGTAAAGTTTCACCACATC 835
| |||||||||||||||||||| || ||||||||||||||||||||||||||| ||||||
Sbjct 835 AATATATAATGCCAAACCTAATCTACGTTTCAAGAGAGAAGAGTAAAGTTTCATCACATC 894
Query 836 ATTTCAAAGCCGGTGCTCTTAATACTTTGCTACGAGTATCAGGGGTGATGACAAATTCAC 895
||||||||||||||||||||||||| ||||||||||| || || |||||||| |||||||
Sbjct 895 ATTTCAAAGCCGGTGCTCTTAATACCTTGCTACGAGTGTCTGGAGTGATGACGAATTCAC 954
Query 896 CGATCATTCTAACACTAGACTGTGATATGTATTCGAACGACCCTA-CAACACCGGTTCGT 954
|||||||||||||||||||||||||||||||||| ||||| || | ||||||| ||||||
Sbjct 955 CGATCATTCTAACACTAGACTGTGATATGTATTCCAACGATCC-AGCAACACCAGTTCGT 1013
Query 955 GCTTTATGCTATTTAACAGATCCTGAAATCAAATCCGGTTTAGG-TTATGTACAGTTTCC 1013
|| | |||||||||||||| ||| |||||||| | |||||||| || ||| ||||||||
Sbjct 1014 GCCCTGTGCTATTTAACAGACCCTAAAATCAAAACTGGTTTAGGGTT-TGTGCAGTTTCC 1072
Query 1014 TCAGAA-ATTTCTAGAAATAGGCAAAAATGATATATATGCATGTGAAAACAAACGCCTCT 1072
||| || ||||| || |||| |||| || |||||||||||||| | | || || ||||
Sbjct 1073 TCA-AACATTTCAAGGAATAAGCAAGAACGATATATATGCATGCGCGTATAAGCGTCTCT 1131
Query 1073 TCAATATCAATATGGTTGGGTTTGATGGTCTAATGGGTCCGACTCATGTGGGAACTGGTT 1132
| | ||||||||| |||||||||||||| ||||||| |||| |||||||||||||||||
Sbjct 1132 TTGAGATCAATATGATTGGGTTTGATGGTTTAATGGGCCCGAATCATGTGGGAACTGGTT 1191
Query 1133 GTTTCTTCAATCGACG-GGCTTTTTATGG-GCCTCCATCTAAGTTGATTTTACCGGAGAT 1190
|||||||||||||||| || ||||||||| || ||||||||| || ||||| || |||||
Sbjct 1192 GTTTCTTCAATCGACGAGG-TTTTTATGGAGC-TCCATCTAATTTAATTTTGCCTGAGAT 1249
Query 1191 TGATGAA-TTGAGGCCATATCGGATTGCGGATAAGTCTATCAAAGCCCAAGATGTTTTGG 1249
|||||| || || ||| |||| |||| |||||| ||||||| || ||||||||||| |
Sbjct 1250 AGATGAACTTAAGCCCA-ATCGTATTGTAGATAAGCCTATCAATGCTCAAGATGTTTTAG 1308
Query 1250 CATTAACACACAATGTAGCAGGATGTATCTATGAG-TACAATACCAATTGGGGATCCAAG 1308
|||| | ||| |||||||||||||||||| ||| | || |||||||||||||| |||
Sbjct 1309 CATTGGCTCACCGTGTAGCAGGATGTATCTACGAGCTT-AACACCAATTGGGGATCAAAG 1367
Query 1309 ATTGGATTCAGATATGGGTCATTAGTAGAAGACTACTACACAGGGTTTATGTTCCATTGT 1368
|||||||||||||||||||| ||||||||||||||||||||||||| || | ||||||||
Sbjct 1368 ATTGGATTCAGATATGGGTCTTTAGTAGAAGACTACTACACAGGGTATAGGCTCCATTGT 1427
Query 1369 GAAGGATGGAGATCAATATTTTGCA-ACCCTAAGAA-AGCTGCTTTTTATGGAGATTCCT 1426
||||||||||||||| | ||||||| |||| || || ||| || |||| |||||||||
Sbjct 1428 GAAGGATGGAGATCAGTTTTTTGCAGACCC-AA-AAGAGCAGCATTTTGCGGAGATTCCC 1485
Query 1427 CAAA--GTGCTTAGTTGATGTAGTGGGTCAACAAATGCGATGGGCCGTTGGGCTTCTTGA 1484
|||| || || | ||||||||||| | ||||||| | |||||||| |||||||||||||
Sbjct 1486 CAAAAAGT-CTAA-TTGATGTAGTGAGCCAACAAAAGAGATGGGCCATTGGGCTTCTTGA 1543
Query 1485 AATATTGTT-T-TCAAAGAAAAGCCCAATTGTCTATGGAT-TCAAATCATTAGGG-CT-G 1539
| | | | | |||| | | ||||| ||| |||||| | |||||||| | ||| || |
Sbjct 1544 AGT-T-GCCATCTCAAGGTATAGCCCCATTACCTATGG-TGTCAAATCAAT-GGGTCTAG 1599
Query 1540 TTAATGGGCTTATGCTATTG-CAACT-CTCC-GTTTCGGCCATTTTGGTCAATTCCGGTT 1596
| || ||| || ||||||| ||| | | | ||| |||| ||||||||| |||| ||
Sbjct 1600 T-AACGGGAGTAGGCTATTGTCAA-TACGCATGTTG-GGCC-TTTTGGTCACTTCCTCTT 1655
Query 1597 ACCGTCTATGGACTT-TTACCTCAGCTTGCACTCATCTATGGAGT-TAGTGTCTTCCCCA 1654
| |||||||||| || || || || ||||| ||| | ||| | | ||| ||||| ||||
Sbjct 1656 ATCGTCTATGGA-TTCTTGCCCCAACTTGCTCTCCTTTATCAA-TCTAGCGTCTTTCCCA 1713
Query 1655 AGGCATCTGATCCGTGGTTTTGGCTTTACATCTTTTTATTCTTTGGTGCTTATGCCCAAG 1714
|| |||| ||||| |||||||||||||||||| |||| ||| | ||||| |||| ||||
Sbjct 1714 AGTCATCAGATCCATGGTTTTGGCTTTACATCGTTTTGTTCCTCGGTGCATATGGGCAAG 1773
Query 1715 ATCTA-TCGGACTTTTTATTGGAAGGAGGAACTTAT--CGGAAATGGTGGAACGATCAAA 1771
||||| ||| ||||| |||| ||||||||||||||| |||| ||||||||||||||||
Sbjct 1774 ATCTACTCG-ACTTTGTATTAGAAGGAGGAACTTATGGCGGA--TGGTGGAACGATCAAA 1830
Query 1772 GAATGGTGAT-GATAAAAGGACTCTCTTCATTCGTCTTTGGTTTTATAGAGTTCACTCTC 1830
||||| || | ||||| |||| |||||||| | | ||||| || ||||||||||||||
Sbjct 1831 GAATG-TGGTCGATAAGAGGATTCTCTTCACACCTATTTGGCTTCATAGAGTTCACTCTT 1889
Query 1831 AAAACCCTAAACCTCTCTACACCTA-AGTTCAACATCACCAGTAAAGCCAATGACGAT-A 1888
||||||||||||||||| || | | | |||||| |||| || |||||||| || || |
Sbjct 1890 AAAACCCTAAACCTCTCCACGCATGGA-TTCAACGTCACAAGCAAAGCCAACGATGACGA 1948
Query 1889 ACGAACAAAGGAAGCGGTACGAGCAAGACATATTTGATTTTGGAACCTCTTCGTCCATGT 1948
| |||||||| ||| |||| ||| |||| || ||||| || || |||||||||||||||
Sbjct 1949 A-GAACAAAGCAAGAGGTATGAGAAAGAGATTTTTGAGTTCGGCCCCTCTTCGTCCATGT 2007
Query 1949 TCTTGCCTTTGACTACGGTTGCCATCGTGAATCTGCTTGCTTTTGTCTGTGGGCTTTATG 2008
||||||| |||||||||||||||||||| || || |||||||||||||| ||||||||||
Sbjct 2008 TCTTGCCCTTGACTACGGTTGCCATCGTTAACCTCCTTGCTTTTGTCTGGGGGCTTTATG 2067
Query 2009 GTAATCTCTTCT-GCGGAGGAGAACTCGTCCTTGAGCTGATGCTGGTGAGCTTT-GCGGT 2066
|| | || || | |||| || ||||||||||||||||||||||| ||| ||| |||||
Sbjct 2068 GTCTTTTCG-CTTGGGGAGAAGGACTCGTCCTTGAGCTGATGCTGGCGAG-TTTCGCGGT 2125
Query 2067 GGTGAATTGCTTGCCGATCTACGAGGCTATGGTGTTGAGGAAAGATGATGGAAAATTACC 2126
|||||| |||||||||||||| ||||||||||||||||||| ||| ||||||||||||||
Sbjct 2126 GGTGAACTGCTTGCCGATCTATGAGGCTATGGTGTTGAGGATAGACGATGGAAAATTACC 2185
Query 2127 AAAAAGAATTAGTTTCTTAGCTGGGAA-CCTCACGGTTGTTCTTATTGTGTCCAG-TTAC 2184
|||||| || ||||| ||||||| || |||||| |||| || |||||||| || ||||
Sbjct 2186 AAAAAGGGTTTGTTTCGTAGCTGG-AATCCTCACATTTGTGCTGATTGTGTC-AGGTTAC 2243
Query 2185 TTCGTCCTCAAGTAA 2199
|| |||||||||||
Sbjct 2244 GTCTTCCTCAAGTAA 2258
> AT4G24000.1 | Symbols: ATCSLG2, CSLG2 | cellulose synthase like
G2 | chr4:12462030-12465625 FORWARD LENGTH=2435
Length=2435
Score = 2202 bits (1192), Expect = 0.0
Identities = 1874/2195 (85%), Gaps = 79/2195 (4%)
Strand=Plus/Plus
Query 34 ACAACCCTCCACACGTGTCATCCCTGCCGGCGCGCCATTCCATACAGAATCTACGCCGTA 93
||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 137 ACAGCCCTCCACACGTGTCATCCCTGCCGGCGAACCATTCCATACAGAATCTACGCCGTA 196
Query 94 ATCCACACGTGTGGCATCATAGCTCTCATGTATCACCATGTACACTCACTTCTC-ACAGC 152
| ||||||||||||||||||||||||||||||||||||||||||||| || || || ||
Sbjct 197 TTTCACACGTGTGGCATCATAGCTCTCATGTATCACCATGTACACTCAATTGTCAAC-GC 255
Query 153 AAACAACACTCTAATAACATGTCTTCTCCTCCTCTCCGATATTGTTCTCGCCTTCATGTG 212
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 256 AAACAACACTCTAATAACATGTCTTCTTCTCCTCTCCGATATTGTTCTCGCCTTCATGTG 315
Query 213 GGCAACCACAACTTCCCTCCGGTTAAACCCGGTTCATCGGACCGAGTACCCTGAGAAATA 272
||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||
Sbjct 316 GGCAACCACAACTTCCCTCCGGTTAAACCCGATTCATCGGACCGAGTACCCTGAAAAATA 375
Query 273 TGCAGCTAAACCGGAGGACTTTCCAAAGCTGGACGTGTTTATATGCACGGCTGATCCGTA 332
||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 376 TGCTGCTAAACCGGAGGACTTTCCAAAGCTGGACGTTTTTATATGCACGGCTGATCCGTA 435
Query 333 CAAGGAGCCTCCGATGATGGTGGTCAACACCGCCTTATCAGTCATGGCTTATGAGTATCC 392
|||||||||||||||||||||||| |||||||| ||||| || |||||||| ||||||||
Sbjct 436 CAAGGAGCCTCCGATGATGGTGGTTAACACCGCTTTATCGGTGATGGCTTACGAGTATCC 495
Query 393 GTC-CGATAAGATTTCAGTCTATGTATCGGACGATGGAGGATCTTCGTTGACTTTGTTTG 451
||| | ||||||| ||||| || ||||||||||||||||||||||| |||||||||||||
Sbjct 496 GTCTC-ATAAGATCTCAGTGTACGTATCGGACGATGGAGGATCTTCCTTGACTTTGTTTG 554
Query 452 CTCTTGTGGAGGCTGCTAAGTTCTCTAAGCATTGGTTGCCCTTTTGCAAGAAGAACAATA 511
||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||||||
Sbjct 555 CTCTTATGGAGGCTGCCAAGTTCTCTAAGCATTGGTTGCCCTTTTGCAAGAATAACAATG 614
Query 512 TTGAAGATCGGTCCCCTGAAGTTTATTTCTCATCAAAGTCACATTC-TCAGAGTGATGAA 570
|| ||||||| || |||||||||||||| || |||||||||||||| || ||||||||||
Sbjct 615 TTCAAGATCGCTCTCCTGAAGTTTATTTTTCTTCAAAGTCACATTCTTC-GAGTGATGAA 673
Query 571 GCTGAAAATCTTAAGATGATGTACAAAGACATGAAGAGTAGAGTAGAACATGTGGTGGAG 630
|||||||||||||||||||||||| ||||||||||||||||||| ||||||||||| |||
Sbjct 674 GCTGAAAATCTTAAGATGATGTACGAAGACATGAAGAGTAGAGTCGAACATGTGGTCGAG 733
Query 631 AGTGGAAAAGTTGAAACTTCGTTTATCACATGCGATCAATTTCGTGGGGTATTCGATTTG 690
|| ||||||||||| ||| |||||||| |||||||||||||| || | || |||||| ||
Sbjct 734 AGCGGAAAAGTTGAGACTGCGTTTATCGCATGCGATCAATTTAGTTGTGTGTTCGATCTG 793
Query 691 TGGACAGACAAATTCACTCGTCATGACCATCCCACAATTATTCA-GGTGCTACAAAATAG 749
|||||||| ||||||||||||||||||||||| || |||||| | |||||||||| ||
Sbjct 794 TGGACAGATAAATTCACTCGTCATGACCATCCTACCATTATT-ATGGTGCTACAACAT-- 850
Query 750 CGAGACAGATATGGACACTACCAAAAAGTATATAATGCCAAACCTAATATATGTTTCAAG 809
| || || | | | || | || ||||||||||| ||||||||||||||
Sbjct 851 --A-AC-------GA-A--A-C----AG-AGATGATGCCAAACCTTATATATGTTTCAAG 891
Query 810 AGAGAAGAGTAAAGTTTCACCACATCATTTCAAAGCCGGTGCTCTTAATACTTTGCTACG 869
||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 892 AGAAAAGAGTAAAGTTTCACCACATCATTTCAAAGCCGGTGCTCTTAATACTTTGTTACG 951
Query 870 AGTATCAGGGGTGATGACAAATTCACCGATCATTCTAACACTAGACTGTGATATGTATTC 929
||||| | ||||||||||| ||||| ||||||||||||||||| ||||| ||||| ||
Sbjct 952 TGTATCTGCCGTGATGACAAACTCACCAATCATTCTAACACTAGATTGTGACATGTACTC 1011
Query 930 GAACGACCCTACAACACCGGTTCGTGCTTTATGCTATTTAACAGATCCTGAAATCAAATC 989
||| | ||||||||||| ||| |||| | |||||||| |||| ||| ||||||| |
Sbjct 1012 AAACAATCCTACAACACCACTTCATGCTCTGTGCTATTTGTCAGACCCTAAAATCAATTT 1071
Query 990 CGGTTTAGG-TTATGTACAGTTTCCTCAGAAATTTCTAGAAATAGGCAAAAATGATATAT 1048
| |||||| || ||| || |||||||| ||||||| || | || |||||||||||| |
Sbjct 1072 TGATTTAGGATT-TGTGCAATTTCCTCAAAAATTTCAAGGAGTAAACAAAAATGATATTT 1130
Query 1049 ATGCATGTGAAAACAAACGCCTC-TTCAATATCAATATGGTTGGGTTTGATGGTCTAATG 1107
|||||| || |||||||| | || | ||||| | ||||||||||||||| || |||
Sbjct 1131 ATGCATCCGAGCTCAAACGCC-CATTTGACATCAACACGGTTGGGTTTGATGGACTTATG 1189
Query 1108 GGTCCGACT-CATGTGGGAACTGGTTGTTTCTTCAATCGACGGGCTTTTTATGGGCCTCC 1166
|| || | | ||| |||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct 1190 GGACC-AGTTCATATGGGAACTGGGTGTTTCTTCAATCGACGGGCGTTTTATGGGCCTCC 1248
Query 1167 -ATCTAAGTTGATTTTACCGGAGATTGATGA-ATT-GAGGCCATATCGGATTGCGGATAA 1223
| ||| |||||||| || ||||| || | ||| | ||||| |||||||||| |||||
Sbjct 1249 GA-CTACTTTGATTTTGCCTGAGATAGAA-ACATTTG-GGCCAAATCGGATTGCCGATAA 1305
Query 1224 GTCTATCAAAGCCCAAGATGTTTTGGCATTAACACACAATGTAGCAGGATGTATCTATGA 1283
| | || |||||||||||| ||||||| || ||||| ||||||||||||||| ||| ||
Sbjct 1306 GCCCATTAAAGCCCAAGATATTTTGGCGTTGGCACACGATGTAGCAGGATGTAACTACGA 1365
Query 1284 GTACAATACCAATTGGGGATCCAAGATTGGATTCAGATATGGGTCATTAGTAGAAGACTA 1343
|| ||| |||||||||||||||||||| || |||||||||||||||||||||||||||||
Sbjct 1366 GTGCAACACCAATTGGGGATCCAAGATAGGTTTCAGATATGGGTCATTAGTAGAAGACTA 1425
Query 1344 CTACACAGGGTTTATGTTCCATTGTGAAGGATGGAGATCAATATTTTGCAACCCTA-AGA 1402
|| |||||| |||||| ||||||||||||||||||||||||| ||||||| ||| | | |
Sbjct 1426 CTTCACAGGATTTATGCTCCATTGTGAAGGATGGAGATCAATTTTTTGCAGCCCGACA-A 1484
Query 1403 AAGCTGCTTTTTATGGAGATTCCTCAAAGTGCTTAGTTGATGTAGTGGGTCAACAAATGC 1462
||||||| ||||||||||| ||| |||| ||| || |||||| | || |||||||| |
Sbjct 1485 AAGCTGCATTTTATGGAGACTCCCCAAAATGCCTAACGGATGTAATAGGCCAACAAATCC 1544
Query 1463 GATGGGCCGTTGGGCTTCTTGAAATAT-TGTTTTCAAAGA-A-AAGCCCAATTGTCTATG 1519
||||| ||||||| ||||||||| || | ||||||| || | || || | || |||||
Sbjct 1545 GATGGTCCGTTGGACTTCTTGAAGTAGCT-TTTTCAA-GATACAATCC-ACTTACCTATG 1601
Query 1520 GATTCAAATCATTAGGGC-TGTTAATGGGCTTATGCTATTGCAACTCTCCGTTTCGGCCA 1578
|| |||| |||| | || | |||||| ||||| | |||||| ||| | | ||| |||||
Sbjct 1602 GAATCAAGCCATT-GAGCCTATTAATGAGCTTAGGTTATTGCCACTATGCATTTTGGCCA 1660
Query 1579 TTTTGGTCAATTCCGGTTACCGTCTATGGACTTTTACCTCA-GCTTGCACTCAT-CTATG 1636
||||||| ||||| | ||||||||| ||||||| || | |||| ||||| | |||
Sbjct 1661 TTTTGGTGTATTCCTCTCGTTGTCTATGGAATTTTACCCCAAG-TTGCCCTCATAC-ATG 1718
Query 1637 GAGTTAGTGTCTTCCCCAAGGCATCTGATCCGTGGTTTTGGCTTTACATCTTT-TTATT- 1694
||||||| ||||| ||||||||||| ||||| ||||||||||||||||| | | || ||
Sbjct 1719 GAGTTAGCGTCTTTCCCAAGGCATCGGATCCATGGTTTTGGCTTTACAT-TATCTTGTTT 1777
Query 1695 CTTTGGTGCTTATGCCCAAGATCTATCGGACTTTTTATTGGAAGGAGGAACTTATCGGAA 1754
|| |||| || || ||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct 1778 CTC-GGTGGGTACGCGCAAGATCTATCAGACTTTTTATTAGAAGGAGGAACTTATCGGAA 1836
Query 1755 ATGGTGGAACGATCAAAGAATGGTG-ATGATAAAAGGACTCTCTTCATTCGTCTTTGGTT 1813
|||||||||||||||||||||| || ||| | | |||||||||||| ||| |||||||||
Sbjct 1837 ATGGTGGAACGATCAAAGAATG-TGGATGGTGAGAGGACTCTCTTCTTTCTTCTTTGGTT 1895
Query 1814 TTATAGAGTTCACTCTCAAAACCCTAAACCTCTCTACACCTAAG--T-TCAACATCACCA 1870
||| |||||||||||||||||||||||||||||| || | ||| | | || |||| |
Sbjct 1896 TTACAGAGTTCACTCTCAAAACCCTAAACCTCTCCACTC--AAGGATAT-AATGTCACGA 1952
Query 1871 GTAAAGCCAATGACGATAACGAACAAAGGAAGCGGTACGAGCAAGACATATTTGATTTTG 1930
||||| |||| |||||||| ||||||| ||||||||| |||||||| || || |||||||
Sbjct 1953 GTAAATCCAACGACGATAATGAACAAATGAAGCGGTATGAGCAAGAGATCTTCGATTTTG 2012
Query 1931 GAACCTCTTCGTCCATGTTCTTGCCT-TTGACTACGGTTGCCATCGTGAATCTGCTTGCT 1989
| |||||||||||||||||||||| || |||||||| |||||| |||||||||| |||
Sbjct 2013 GGCCCTCTTCGTCCATGTTCTTGCCCATT-ACTACGGTCGCCATCATGAATCTGCTAGCT 2071
Query 1990 TTTGT-CTGTGGGCTTTATGGTAATCTCTTCT-GCGGAGGAGAACTCGTCCTTGAGCTGA 2047
||| | | |||| || ||||||| | || || | |||| || || ||||||||| ||||
Sbjct 2072 TTTATGC-GTGGCCTATATGGTATTTTCA-CTTGGGGAGAAGGACCCGTCCTTGAACTGA 2129
Query 2048 TGCTGGTGAGCTTT-GCGGTGGTGAATTGCTTGCCGATCTACGAGGCTATGGTGTTGAGG 2106
|||| | ||| ||| ||||||||||||||||| |||||||| || || ||||||||||||
Sbjct 2130 TGCTAGCGAG-TTTCGCGGTGGTGAATTGCTTACCGATCTATGAAGCCATGGTGTTGAGG 2188
Query 2107 AAAGATGATGGAAAATTACCAAAAAGAATTAGTTTCTTAGCTGGGAACCTCACGGTT-GT 2165
| ||||| ||||||||||||||||| ||| |||||||||||||| ||||| | || ||
Sbjct 2189 ATCGATGACGGAAAATTACCAAAAAGGATTTGTTTCTTAGCTGGGCTCCTCA-GTTTTGT 2247
Query 2166 TCTTATTGTGTCCAGT-TACTTCGTCCTCAAGTAA 2199
||||| | ||| || |||||| |||||||||||
Sbjct 2248 TCTTACCGGGTC-AGGCTACTTCTTCCTCAAGTAA 2281
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 109085784285
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5