BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg889830
Length=1209
Score E
Sequences producing significant alignments: (Bits) Value
AT4G23380.1 | Symbols: | Protein of Unknown Function (DUF239) ... 1692 0.0
AT4G23370.1 | Symbols: | unknown protein; FUNCTIONS IN: molecu... 396 3e-109
AT4G23360.1 | Symbols: | unknown protein; FUNCTIONS IN: molecu... 390 1e-107
> AT4G23380.1 | Symbols: | Protein of Unknown Function (DUF239)
| chr4:12214667-12216333 REVERSE LENGTH=1203
Length=1203
Score = 1692 bits (916), Expect = 0.0
Identities = 1112/1206 (92%), Gaps = 15/1206 (1%)
Strand=Plus/Plus
Query 1 ATGGATTCCTCCAATAACCACCTTGTGTTAGTG-ATTCTGTTAACAATTGCTCTTGTTTT 59
||||||||||||||||| ||||||||||| | ||||||||||||||| ||||||| ||
Sbjct 1 ATGGATTCCTCCAATAAAAACCTTGTGTTA-CGAATTCTGTTAACAATTTCTCTTGTATT 59
Query 60 AG-GGGTGAAAGCAGCTCATCTAAGCCGAGCGATACCATCGGAAGAAGAGAAGAACGAAA 118
|| || ||||||||||| |||||| | ||| |||||||||||||||||||| ||||
Sbjct 60 AGTCTCTG-AAGCAGCTCATGAAAGCCGGGGGATTCCATCGGAAGAAGAGAAGAAAGAAA 118
Query 119 TGGAGAGGCAACTTAAAGCTATCAACAAACCTCCAATCAAGAGTTTTAAGACTGAACAAG 178
||||||||||||| |||||||||||||||||| | ||||| ||||| || ||||||||||
Sbjct 119 TGGAGAGGCAACTCAAAGCTATCAACAAACCTGCTATCAAAAGTTTCAAAACTGAACAAG 178
Query 179 GTGAAATATTCGATTGTATCGACATTCACAAGCAACTAGCCTTTGATCATCATCTGCTGA 238
|||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| |
Sbjct 179 TTGAAATATTCGATTGTATAGACATTCACAAGCAACTAGCCTTTGATCACCATCTGCTAA 238
Query 239 GAAACCACTCTATTCAGCTAAAGCCAACAAGTGTACCTAAAT-G--GATCACATGCCACA 295
||||||||||| || ||||||||||||||||||||||||||| | |||||||| | |||
Sbjct 239 GAAACCACTCTGTTAAGCTAAAGCCAACAAGTGTACCTAAATGGCCGATCACATACGACA 298
Query 296 ACAATTCACAAAAAATTGGTCCTTTGGAGCTTCAGCTAAAGGGAATAAGTTGTCCACATG 355
|||| ||||||| |||||||| || |||||||||||||||||||||||||||||||||
Sbjct 299 ACAAAGGACAAAAAGTTGGTCCTATGCAGCTTCAGCTAAAGGGAATAAGTTGTCCACATG 358
Query 356 GAACAGTAATTGTTAAAAGGACTACAATCCAAGATCTTATATACTCACAACATTTGAAAT 415
| ||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||
Sbjct 359 GGACAGTAATTGTTAAAAGGACTACAATCCAAGATCTTATAAACTCGCAACATTTGAAAT 418
Query 416 CCATTGGATTT-AATATCCCTAGACATGTCCTTAGAGACGGAAACAACATTGATTTGACT 474
||||||| ||| ||||||||||||||||||||||| | |||| ||||||||||| | |
Sbjct 419 CCATTGG-TTTCAATATCCCTAGACATGTCCTTAGCCAGGGAAGTAACATTGATTTAAGT 477
Query 475 GGACATCATTTTGCAACGGCCGACTATGAATATGACAACATTGCTGGAGTCCA-AGGAAA 533
||||||||||||||||| ||||||||||| ||||||||| |||||||||| | ||||||
Sbjct 478 GGACATCATTTTGCAACAGCCGACTATGACTATGACAACGTTGCTGGAGT-AACAGGAAA 536
Query 534 CATTAACCTCTGGGATCCACAAGTGTCACATGATCAAGTTAGTCTTGCAACCATGGCGAT 593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 537 CATTAACCTCTGGGATCCACAAGTGTCACATGATCAAGTTAGTCTTGCAACCATGGCGAT 596
Query 594 TGCAGGCGGTCC-AATAATCGAAGAGCTCTCCAGCATTTCCGTTGGATGGATGGTGAATT 652
|||||||||||| || ||| ||| ||||| |||||||||| ||||||||||||||||||
Sbjct 597 TGCAGGCGGTCCTAA-AATAGAACAGCTCGCCAGCATTTCAGTTGGATGGATGGTGAATC 655
Query 653 CATTGTTGTAC-AAGGATCACATTCACTTATACACCTACTGGACTGCAGATGGATATAAT 711
| ||||| ||| ||| ||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 656 CGTTGTTATACCAAG-ATCACATTCACTTATACACTTACTGGACTGCAGATGGATATAAT 714
Query 712 AAGACAGGCTGCTACGACATAAGATGTCCTGGATTCGTGCAAGTCAGCAAGAGAATACCA 771
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 715 AAGACAGGCTGCTACGACATAAGATGTCCTGGATTCGTGCAAGTCAGCAAGAGGATACCA 774
Query 772 CTTGGTGTCCTTCTTCAGCCAGTTTCAATTTATAATGGTACACAAAAAGAAATGGACTTA 831
||||||||||||||||| ||| |||| |||||||||| |||||||||||||||||||||
Sbjct 775 CTTGGTGTCCTTCTTCAACCAATTTCTGTTTATAATGGCACACAAAAAGAAATGGACTTA 834
Query 832 AGCTTGCATCAGGTAATTACCTCCAGAGTCTCTAGAGTGAATGTTGGGTATTGGCCACAG 891
||||||||||||||| ||||||||||||||||| | ||||||||||||||||||||||||
Sbjct 835 AGCTTGCATCAGGTAGTTACCTCCAGAGTCTCTGGTGTGAATGTTGGGTATTGGCCACAG 894
Query 892 TCATTGTTCATAGCCTCAGGCTTAGTTAAAGGAGCAGATCTTGCATCTTGGGGAGGTCAA 951
|||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 895 TCATTGTTCATAGCGTCAGGCTTAGTGAAAGGAGCAGATCTTGCATCTTGGGGAGGTCAA 954
Query 952 GTGTACAGTCCAACGACTGAAAAGAGTCCAATTATGGGCAGTGGGCATTTTCCTAAGGAA 1011
||||||||||||| ||| |||||||||||||| |||||||||||||||||||||||||||
Sbjct 955 GTGTACAGTCCAAAGACAGAAAAGAGTCCAATCATGGGCAGTGGGCATTTTCCTAAGGAA 1014
Query 1012 GGCTTCGGAAAAGCAGCCTTTGTAAACAATATCCATATCCTCAATGGTAAGGGAGAAGCT 1071
|| ||||||||||||||||||||||||||||| |||||| | ||||||||||||||||||
Sbjct 1015 GGTTTCGGAAAAGCAGCCTTTGTAAACAATATACATATCATGAATGGTAAGGGAGAAGCT 1074
Query 1072 TTGATTCCACAAATCTACACTATAAAGACACATGAGAGCACTCCAAATTGTTATAAAGCC 1131
|||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||
Sbjct 1075 TTGATTCCACAAATCTACACTATAGAGACACATGAGAGCAGTCCAAATTGTTATAAAGCC 1134
Query 1132 AAGTATGTTCATGATGATGATGAACCTTGGATAAGAGCTGTTTACTATGGAGGTCCTGGA 1191
|||| |||||||||||| |||||||||||||||||||||||||||| |||||||||||||
Sbjct 1135 AAGTTTGTTCATGATGAAGATGAACCTTGGATAAGAGCTGTTTACTTTGGAGGTCCTGGA 1194
Query 1192 GGATGC 1197
||||||
Sbjct 1195 GGATGC 1200
> AT4G23370.1 | Symbols: | unknown protein; FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown;
LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF239, plant (InterPro:IPR004314);
BEST Arabidopsis thaliana protein match is: unknown
protein (TAIR:AT4G23360.1); Has 2365 Blast hits to 710 proteins
in 27 species: Archae - 0; Bacteria - 35; Metazoa - 0;
Fungi - 30; Plants - 2300; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink). | chr4:12206362-12213435 REVERSE LENGTH=3117
Length=3117
Score = 396 bits (214), Expect = 3e-109
Identities = 879/1183 (74%), Gaps = 113/1183 (10%)
Strand=Plus/Plus
Query 83 GCCGAGCGATACCATCGGAA-GAAGAGAAG-AACGAAATGGAGAGGCAACTTAAAGCTAT 140
||||| | |||||||| || | ||| ||| || ||||||||||| ||||| ||||||||
Sbjct 1979 GCCGACCAATACCATC-AAAGGCAGA-AAGAAAAGAAATGGAGAGACAACTCAAAGCTAT 2036
Query 141 CAACAAACCTCCAATCAAGAGTTTTAAGACTGAACAAGGTGAAATATTCGATTGTATCGA 200
|||||| ||| ||||||||||||| ||||||||| | ||||| |||||||| ||||||||
Sbjct 2037 CAACAAGCCTGCAATCAAGAGTTTGAAGACTGAATATGGTGATATATTCGACTGTATCGA 2096
Query 201 CATTCACAAGCAACTAGCCTTTGATCATCATCTGCTGAGAAACCACTCTATTCAGCTAAA 260
|||||||| |||| ||| |||||||||||||| || | |||||||||||||||||||||
Sbjct 2097 TATTCACAAACAACGAGCATTTGATCATCATCTACTCAAAAACCACTCTATTCAGCTAAA 2156
Query 261 GCCAACAAGTGTACCTAAATGGATCACATGCCACAACAATTCACAAAAAATTGGTCCTTT 320
||| |||||||||||| ||||||||| || | ||| ||| | | | | || |||
Sbjct 2157 GCCTACAAGTGTACCTGAATGGATCA-AT-AGA-AAC-ATT-TC-AGGGA--GATCATTT 2208
Query 321 GGAGCTTC-AGCTAA-AGGGAATAAGTTGTCCACATGGAACAGTAATTGTTAAAAGGACT 378
|| |||| | | || | || ||||| |||||| |||||||||||||||| |||||||||
Sbjct 2209 GG-TCTTCTA-C-AAGAAGGTATAAGCTGTCCAGATGGAACAGTAATTGTAAAAAGGACT 2265
Query 379 ACAATCCAAGATCTTATATACT-CACAACATTTGAAATCCATTGGATTTAATATCCCTAG 437
||||| ||||||||||| | | |||||| |||||||||||| ||||| | ||| ||
Sbjct 2266 ACAATGCAAGATCTTATGCA-TGCACAACGTTTGAAATCCATGGGATTCGACGGCCCGAG 2324
Query 438 A-CATGTC-CTTAGAGACGGAAACAACATTGATTTGACT-GGACA-TC-ATTTTGCAACG 492
| | | || | |||||| |||||||| | |||| | | | | | || | ||||||
Sbjct 2325 ACCTTTTCTCACAGAGAC--AAACAACACTAATTTCAATAGAAAATTCTACGTTGCAAAA 2382
Query 493 GCCGACTAT-GAATATGA-CAACATTGCTGGAGTCCA-AGGAAACATTAACCTCTGG-GA 548
|| ||||| || | || | |||||||||| | ||||||||||||| | ||| |
Sbjct 2383 GCTAACTATGGACCA-GATC-TTTTTGCTGGAGT-AAGAGGAAACATTAACATATGGTCA 2439
Query 549 TCCACAAGTGTCACATGATCAAGTTAGTCTTGCA-ACCATGGCGA-TTGCAGGCGGTCCA 606
||| || | | || |||||||||||| ||||| | ||| || | ||| || ||| |
Sbjct 2440 -CCAAAAATCTTGCAAGATCAAGTTAGTGTTGCATA-CATAGC-AGTTGGTGGAGGTGC- 2495
Query 607 ATAATCGAAGAGCTCT-CCAGCATTTCCGTTGGATGGATGGTGAATTCATTGT-TGTA-C 663
||| ||| | | | |||||||||| |||||||||| |||||| || | | | || |
Sbjct 2496 -TAA-AGAA-AATTTTGCCAGCATTTCAGTTGGATGGAAAGTGAATCCA-TCTCTATACC 2551
Query 664 A-AG-GATCACATTCACTTATACACCTAC-TGGACTG-CAG--ATG-GATATA--ATAAG 714
| | ||||| ||| |||||| ||| | ||||||| || || | |||| | ||
Sbjct 2552 ATGGTGATCATGTTCGTTTATACGCCT-CTTGGACTGTAAGTTTTGAGTTATACCACAAT 2610
Query 715 ACAGGCTGCTACGACATAAGATGTCCTGGATTCGTGCAAGTCAGCAAGAGAATACCACTT 774
|| |||||| ||||||| |||||||||||| |||||||| ||||||| ||| |||||
Sbjct 2611 ACCGGCTGCAACGACATGTCATGTCCTGGATTTGTGCAAGTTAGCAAGACTATAGCACTT 2670
Query 775 GGTGTCC-TTCTTCAGCCAGTTTCAATTTATAATGGTACACAAAAAGAAATG-GACTTAA 832
|||| || || |||| ||| |||| || ||||| ||| |||| | ||| || | || |
Sbjct 2671 GGTG-CCATTATTCAACCAATTTCCATCTATAAGGGTCCACAGTATGAATTGCG-TTTGA 2728
Query 833 GCTTGCATCAGGTAATTACCTC----CAGA---GT-CTCT--A-G--A-G-TGA--ATGT 875
|||| |||| | ||| | || ||| || | | | | | | ||| | ||
Sbjct 2729 CCTTGTATCA-G-AATCAAATCAAGGGAGATTGGTGGTTTGCATGTAATGATGAGGACGT 2786
Query 876 TGGGTATTGGCCA-CAGTCATTGTTCATAG-CCTCAGGCTTAG--T-TAAAGGAGC-AGA 929
||| || |||||| || |||||||||| || ||| || || | ||| | || ||
Sbjct 2787 TGGATACTGGCCAGCA-TCATTGTTCA-AGTCCT--GG-AGAGAATCTAACGCCGCAAG- 2840
Query 930 TCT-TGCATCTTGGGGAGGTCAAGTGTACAGTCCAACGACTGAAAAGAGTCCAATTATGG 988
| | |||||||||||| || |||||||| || ||| ||| || ||||||||| |||||
Sbjct 2841 T-TATGCATCTTGGGGTGGCCAAGTGTATAGCCCAGTGACAGAGAAGAGTCCACCTATGG 2899
Query 989 GCAGTGGGCATTTTCCTAAG-GAAGGCTTCGGA-AAAGCAGCCTT-TGTAAACAATATCC 1045
| ||||| |||| |||| | || |||||| | ||| | || || ||| | ||| |||
Sbjct 2900 GAAGTGGTCATTGGCCTA-GTGAGGGCTTCC-ATAAATCTGC-TTATGTTAGCAACCTCC 2956
Query 1046 ATATCCTCAATGGTAAGGGA-GAAGCTTTGATTCCACAAATC---TACACTATAAAGACA 1101
| ||| | |||| ||| ||| || | ||| | |||||||| | |||| | || | |
Sbjct 2957 AAATCATTAATGTTAATGGAAGA-GTTTTTAATCCACAAA-CGGGTACAGTG-AA-GTTA 3012
Query 1102 CATGAGAGCACTCCAAAT-TGTTATAAAGCCA-AGTATGTTCATGATGATGATGAA-CCT 1158
||||||| || | | || ||||| ||||||| | | ||||||||||| | | ||| |||
Sbjct 3013 CATGAGACCA-TGCGAAGCTGTTACAAAGCCAGATT-TGTTCATGATGCTAA-GAAGCCT 3069
Query 1159 TGGATAAGAGCTGTTTACTATGGAGGTCCTGGAGGATGCATAG 1201
||| ||| | || ||||||||||||||||||||||||||||||
Sbjct 3070 TGGTTAAAATCTTTTTACTATGGAGGTCCTGGAGGATGCATAG 3112
> AT4G23360.1 | Symbols: | unknown protein; FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown;
LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF239, plant (InterPro:IPR004314);
BEST Arabidopsis thaliana protein match is: unknown
protein (TAIR:AT4G23370.1); Has 1449 Blast hits to 682 proteins
in 27 species: Archae - 0; Bacteria - 26; Metazoa - 0;
Fungi - 20; Plants - 1403; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink). | chr4:12200269-12204792 REVERSE LENGTH=2622
Length=2622
Score = 390 bits (211), Expect = 1e-107
Identities = 922/1250 (74%), Gaps = 109/1250 (9%)
Strand=Plus/Plus
Query 16 AACCACCTTGTGTTAGTGATTCTGTTAACAATTGCTCTTGTTTTA-GGGGTGAAAGCAGC 74
|||||| |||||||| |||||||||||||| | ||||||||||| | || ||||| |
Sbjct 1417 AACCACTTTGTGTTACTGATTCTGTTAACAGTCACTCTTGTTTTATCCGCTG-AAGCAAC 1475
Query 75 TCATCTAA-GCCGAGCGATACCATCGGAA-GAAGAGAAGAACGAAATGGAGAGGCAACTT 132
| | || ||||| | |||||||| || | | | ||||| |||||| |||| |||||
Sbjct 1476 T-AAGGAACGCCGACCAATACCATC-AAAGGCACAAAAGAATGAAATGAAGAGACAACTC 1533
Query 133 AAAGCTATCAACAAACCTCCAATCAAGAGTTTTAAGACTGAACAAGGTGAAATATTCGAT 192
|||||||||||||| ||| ||||||||||||||||||||||||| ||||| ||||| |||
Sbjct 1534 AAAGCTATCAACAAGCCTGCAATCAAGAGTTTTAAGACTGAACATGGTGATATATTTGAT 1593
Query 193 TGTATCGACATTCACAAGCAACTAGCCTTTGATCATCATCTGCTGAGAAACCACTCTATT 252
|||||||| |||||||| |||||||| || ||||||||||| || | |||||||||| ||
Sbjct 1594 TGTATCGATATTCACAAACAACTAGCATTGGATCATCATCTACTAAAAAACCACTCTGTT 1653
Query 253 CAGCTAAAGCCAACAAGTGTACCTAAATGGATCACATG-CCACAACAATTCACAAAAAAT 311
|||||||||||||||| |||||| |||||||||| || |||||| |||| | ||
Sbjct 1654 CAGCTAAAGCCAACAACAGTACCTGAATGGATCAC-TGAAAACAACATTTCAGGGAGTAT 1712
Query 312 TGGTCCTTTGGAGCTTCAGCTAAAGGGAATAAGTTGTCCACATGGAACAGTAATTGTTAA 371
| | | ||| | | || || || ||||| |||||| |||||||||||||||| ||
Sbjct 1713 TAAT-C-TTGTA-C--AAG---AA-GGTATAAGCTGTCCAAATGGAACAGTAATTGTAAA 1763
Query 372 AAGGACTACAATCCAAGATCTTATATACT-CACAACATTTGAAATCCATTGGATTTAATA 430
|||||||||||| |||||||| || | | |||||| |||||||||||| ||||| |
Sbjct 1764 AAGGACTACAATGCAAGATCTGATGCA-TGCACAACGTTTGAAATCCATGGGATTCGACG 1822
Query 431 TCCCTAGA-CATGTC-CTTAGAGACGGAAACAACATTGATTTGACTGG-ACA-TC-ATTT 485
||| ||| | | || | |||||| |||||||| | ||| | ||| | | || || |
Sbjct 1823 GCCCGAGACCTTTTCTCACAGAGAC--AAACAACACTAATTCAAATGGAAAATTCTATGT 1880
Query 486 TGC-AACGGCCGA-CTAT-GAATATGA-CAACATTGCTGGAGTCCA-AGGAAACATTAAC 540
||| || || | || | || | || | |||||||||| | |||| |||||||
Sbjct 1881 TGCAAAAGG--TACCTTTGGACCA-GATC-TTTTTGCTGGAGT-AAGAGGACACATTAAT 1935
Query 541 CTCTGGGATCCACAAGTGTC--ACATGATCAAGTTAGTCTTGCA-ACCATGGCGA-TTGC 596
| ||| | || || | || || |||||||||||||| ||| | ||| || | |||
Sbjct 1936 GTATGGAAACC-GAA-TATCTTGCAAGATCAAGTTAGTCTGGCATA-CATAGC-AGTTGG 1991
Query 597 AGGCGGTCCAATAATCGAAGAGCTCTCCAGCATTTCCGTTGGATGGATGGTGAATTCATT 656
|| || | ||| ||| | || |||||||||| |||||||||| |||||| |||
Sbjct 1992 TGGAGGGGC--TAA-AGAAAATTTCGCCAGCATTTCAGTTGGATGGAAAGTGAATCCATC 2048
Query 657 GTTGTAC-A-AG-GATCACATTCACTTATACACCTAC-TGGACTG-CAG--ATG-GATAT 708
||||| | | ||||| ||| |||||| ||| | ||||||| || || | |||
Sbjct 2049 CCTGTACTATGGTGATCATGTTCGTTTATACGCCT-CTTGGACTGTAAGTTTTGAGTTAT 2107
Query 709 A--ATAAGACAGGCTGCTACGACATAAGATGTCCTGGATTCGTGCAAGTCAGCAAGAGAA 766
| | || || || ||| ||||||| |||||||||||| |||||||| ||||||| |
Sbjct 2108 ACCACAATACCGGGTGCAACGACATGTCATGTCCTGGATTTGTGCAAGTTAGCAAGACTA 2167
Query 767 TACCACTTGGTGTCC-TTCTTCAGCCAGTTTCAATTTATAATGGTACACAAAAAGAAATG 825
|| ||||||||| || || |||| ||| |||| || ||||| ||| ||||| | || ||
Sbjct 2168 TAGCACTTGGTG-CCATTATTCAACCACTTTCCATCTATAAGGGTCCACAATATCAATTG 2226
Query 826 GACTTAAGCTTGCATCAGG-T--AATTACCTCCAGA---GT--CTCT-A-G--A-G-TG- 870
| || | |||| |||||| | ||| | ||| || | | | | | | ||
Sbjct 2227 CATTTGACCTTGTATCAGGATCAAATCA-AGGGAGATTGGTGGATTTCATGTAATGATGA 2285
Query 871 A-ATGTTGGGTATTGGCCA-CAGTCATTGTTCATAG-CCTCAGGCTTAG--T-TAAAGGA 924
| | ||||| || |||||| || |||||||||| || ||| || || | ||| |
Sbjct 2286 AGACGTTGGATACTGGCCAGCA-TCATTGTTCA-AGTCCT--GG-AGAGAATCTAACGCC 2340
Query 925 GC-AGATCT-TGCATCTTGGGGAGGTCAAGTGTACAGTCCAACGACTGAAAAGAGTCCAA 982
|| || | | |||||||||||||||||||||||| || || ||| || |||||||||
Sbjct 2341 GCAAG-T-TATGCATCTTGGGGAGGTCAAGTGTATAGCCCTGTGACAGAGAAGAGTCCAC 2398
Query 983 TTATGGGCAGTGGGCATTTTCCTAAG-GAAGGCT-TCGGAAAAGCAGCCT-TTGTAAACA 1039
|||||| ||||| |||| ||| || || |||| | | ||| | || | || || ||
Sbjct 2399 CTATGGGAAGTGGTCATTGGCCT-AGTGAGGGCTACCAG-AAATCTGCTTATTTTAGAC- 2455
Query 1040 ATATCCATATCCTCAATGGT-AAGGGAGAAGCTTTGATTCCACAAATC---TACACTATA 1095
| |||| || | |||| | || || || ||| | |||||||| | |||| |
Sbjct 2456 ACGTCCAAATGAGCCTTGGTGATGGAAG-AGTTTTTAATCCACAAA-CGGGTACA--GTG 2511
Query 1096 AAGACACATGAGAGCACTCCAAATTGTTATAAAGCCA-AGTATGTTCATGATGATGATGA 1154
||| | |||||| || || ||| ||||| ||||||| | || ||||||||| || || |
Sbjct 2512 AAGTTATATGAGACCAGTCGAAACTGTTACAAAGCCAGATTA-GTTCATGATCATTAT-A 2569
Query 1155 A-CCTTGGATAAGAGCTGTTTACTATGGAGGTCCTGGAGGATGCATAGGG 1203
| |||||| ||| | || ||||||||||||||||||||||||||||||||
Sbjct 2570 AGCCTTGGTTAAAATCTATTTACTATGGAGGTCCTGGAGGATGCATAGGG 2619
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 59387244735
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5