BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg889979
Length=1731
Score E
Sequences producing significant alignments: (Bits) Value
AT3G25510.1 | Symbols: | disease resistance protein (TIR-NBS-L... 547 1e-154
AT1G65850.2 | Symbols: | Disease resistance protein (TIR-NBS-L... 514 1e-144
AT1G69550.1 | Symbols: | disease resistance protein (TIR-NBS-L... 507 2e-142
AT3G44670.1 | Symbols: | Disease resistance protein (TIR-NBS-L... 342 6e-93
AT5G11250.1 | Symbols: | Disease resistance protein (TIR-NBS-L... 327 2e-88
AT3G04210.1 | Symbols: | Disease resistance protein (TIR-NBS c... 154 3e-36
> AT3G25510.1 | Symbols: | disease resistance protein (TIR-NBS-LRR
class), putative | chr3:9260838-9268797 REVERSE LENGTH=5946
Length=5946
Score = 547 bits (296), Expect = 1e-154
Identities = 619/773 (80%), Gaps = 30/773 (4%)
Strand=Plus/Plus
Query 207 GAAGGAGTTCCAAAGAAAAGGAATCACACCGTTC-ATCGATAATGAGATCAAGAGAGGAG 265
||||||||| |||||||||||||||||||| ||| || ||||||||||||||||||||||
Sbjct 3810 GAAGGAGTTTCAAAGAAAAGGAATCACACCTTTCAAT-GATAATGAGATCAAGAGAGGAG 3868
Query 266 AATCCATTGGTCCTGAACTTATAC-AGGCCATTAGAGGGTCTAAGATCGCGA-TCATCTT 323
|||||||| ||||||||||| ||| || | || ||||| |||| ||| || | |||||||
Sbjct 3869 AATCCATTAGTCCTGAACTTGTACTAG-CAATCAGAGGTTCTAGGATTGC-ACTCATCTT 3926
Query 324 GCTCTCAAAGAACTATGCTTCTTCAAAGTGGTGTCTTGACGAATTGGTGGAGATTATGAA 383
||||| | |||||| |||||||| ||||||||||| ||||| | |||||| || ||
Sbjct 3927 ACTCTCTAGGAACTACGCTTCTTCGTCTTGGTGTCTTGATGAATTAGCGGAGATAATCAA 3986
Query 384 GTGTAGAGAAGAGTTAGGTCAAACTGTGATGGCCATTTTCTATAAAGTAGATCCATATGA 443
||||||||||||||| |||||||||||||||| ||||||||||||| ||||| | |||
Sbjct 3987 GTGTAGAGAAGAGTTTGGTCAAACTGTGATGGTTGTTTTCTATAAAGTTGATCCTTCTGA 4046
Query 444 TGTAAAGAAGCAGG-TCGGAGAATTTGGCAAG-GTTTTCAGAAAAACTTGTGCTGGTAAC 501
| |||||||| | | || || ||||| | | |||||||||||||| |||||||||||
Sbjct 4047 TATAAAGAAGTTGACT-GGTGACTTTGGGA-GTGTTTTCAGAAAAACATGTGCTGGTAAA 4104
Query 502 ACTAAGGAGGACATTAAAAGATGGAGACAAGCTTTAGGAAAAGTGGCCACAATTGCGGGT 561
|| || ||||||| || ||||||| ||||||| ||| ||||||||| ||| |||| |||
Sbjct 4105 ACAAATGAGGACACTAGGAGATGGATACAAGCTCTAGCAAAAGTGGCAACACTTGCCGGT 4164
Query 562 TACCATTCAAGCAATTGGGATAATGAAGCGGCCATGATCGAAAGACTCGCCATTGATGTT 621
||| ||||| ||| ||||||||||| |||| |||||| |||| | |||||| |||| ||
Sbjct 4165 TACGTTTCAAACAACTGGGATAATGAGGCGGTCATGATTGAAAAAATCGCCACTGATATT 4224
Query 622 TCCAATGAGCTGATTA-GTTCTGCGCCATCTAGTGATTTTGACGGTTTTGTTGGAATGAA 680
|| || || ||| || || | | |||||||| ||||| |||| || ||||| |||
Sbjct 4225 TCAAACAAGTTGAATAAGTCCA-CACCATCTAGGGATTTCGACGAATTAGTTGGGATGGG 4283
Query 681 AGCTCATATGGAAAATATAGAACCATTCTTCCGCCTAGACTCGGATGAAGTCAAAATGAT 740
|||||||||||||| || |||| ||| || |||||||||| |||||||| | |||||
Sbjct 4284 AGCTCATATGGAAAGGATGGAACTATTGTTATGCCTAGACTCTGATGAAGTGAGGATGAT 4343
Query 741 AGGGATTTGTGGTCCTTCTGGAATTGGTAAGAGCACCATTGCCAGATT-TATATTTGGTG 799
||||||||| ||||| ||||| |||||||||| ||||||||| ||||| | | ||| |
Sbjct 4344 AGGGATTTGGGGTCCGTCTGGGATTGGTAAGACCACCATTGCTAGATTCT-TGTTTAGCC 4402
Query 800 AATACTCTCATGAGTT-CGAGCTAAGTGTCTTCATGGAAAATATCAAAAGA-CG--T-TA 854
| | ||| || |||| ||| ||||| | ||| ||||| ||||| |||||| | | ||
Sbjct 4403 AGTTTTCTGAT-AGTTTCGAACTAAGCGCCTTTATGGAGAATAT-AAAAGAGCTAATGTA 4460
Query 855 TCCAAGACC--T-TGTTAC-GATGAGTACAGTATGAAA-TTGCAATTACAAAAGGAGTTT 909
| || ||| | |||| | ||||| || ||| ||| ||||| |||||||| |||||
Sbjct 4461 TAGAAAACCAGTGTGTT-CTGATGACTATAGTGC-AAAGTTGCACTTACAAAACCAGTTT 4518
Query 910 TTGTCTCAAATAATGAACCAGGA-GGATATAAAGATTCATCATTTAGGAGTTG 961
||||||||||||| ||||| | |||| | || ||| ||||||||||||||
Sbjct 4519 ATGTCTCAAATAATCAACCAT-ATGGATGTCGAGGTTCCTCATTTAGGAGTTG 4570
> AT1G65850.2 | Symbols: | Disease resistance protein (TIR-NBS-LRR
class) family | chr1:24494678-24498542 FORWARD LENGTH=3269
Length=3269
Score = 514 bits (278), Expect = 1e-144
Identities = 701/898 (78%), Gaps = 57/898 (6%)
Strand=Plus/Plus
Query 104 CTTCTTTATCA---CCTCCATCTTCTTTGTCTTACAAGTGGAAACA-CGACGTCTTTCCA 159
|||||| |||| ||| |||| |||| ||| ||||||||| ||| | | |||||||||
Sbjct 154 CTTCTTCATCAGTTCCTTCATCATCTTCGTCCCACAAGTGGACACATC-AAGTCTTTCCA 212
Query 160 AGCTTCCGTGGTGTAGATGTCCGTCG-GGACTTTCTCAGTCATATTCAGAAGGAGTTCCA 218
||||||||||| | |||||| ||| | || ||||||||||||||||| |||||||| ||
Sbjct 213 AGCTTCCGTGGGGAAGATGTACGTAGAGG-TTTTCTCAGTCATATTCACAAGGAGTTTCA 271
Query 219 AAGAAAAGGAATCACACCGTTCATCGATAATGAGATCAAGAGAGGAGAATCCATTGGTCC 278
|||||| ||||| ||||| ||||| ||||||||||||||||||||||||||||||||||
Sbjct 272 AAGAAAGGGAATTACACCATTCATTGATAATGAGATCAAGAGAGGAGAATCCATTGGTCT 331
Query 279 TGAACTTATACAGGCCATTAGAGGGTCTAAGATCGCGATCATCTTGCTCTCAAAGAACTA 338
|||| | ||||| || ||||||| |||||||||||||| |||||||||| | ||||||
Sbjct 332 TGAAATCATACATGCGATTAGAGAATCTAAGATCGCGATTGTCTTGCTCTCTAGGAACTA 391
Query 339 TGCTTCTTCAAAGTGGTGTCTTGACGAATTGGTGGAGATTATGAAGTGTAGAGAAGAGTT 398
|||||||||| |||||||||||||| ||||||||||| ||||| || | |||||| ||
Sbjct 392 TGCTTCTTCATCTTGGTGTCTTGACGAGTTGGTGGAGATCATGAAATGCAAAGAAGAATT 451
Query 399 -AGGTCAAACT-GTGATGGCCATTTTCTATAAAGTAGATCCATATGATGTAAAGAAGCAG 456
|| ||||| | ||||| |||||||||||| ||| ||||||| ||||| |||||||
Sbjct 452 TAG-TCAAA-TAGTGATCCCCATTTTCTATAGAGTGGATCCATCCGATGTTAAGAAGCTC 509
Query 457 GTC-GGAGAATTT-GGCAAGGTTTTCAGAAA-AACTTGTGCTGGTAACACTAAGGAGGAC 513
| ||| ||||| || || || |||| ||| || ||||| |||||| ||||| ||||
Sbjct 510 A-CAGGA-AATTTTGGGAATGTCTTCAAAAATAA-TTGTGTTGGTAAAACTAATGAGGTT 566
Query 514 ATTAA--AAGATGGAGACAAGCTTTAGG-AAAAGTGGCCACAATTGCGGGTTACCATTCA 570
|| || || ||||||||||||| | || |||| ||| |||| | |||||| ||||
Sbjct 567 AT-AAGGAA-ATGGAGACAAGCTCT-GGCAAAAATGGGAACAACCACTGGTTACGATTCT 623
Query 571 AGCAATTGGGATAATGAAGCGGCCATGATCGAAAGAC-TCGCCATTGATGTTTCCAATGA 629
|||| ||||||||||||||| ||||||| |||| || | |||| |||| |||| ||| |
Sbjct 624 CGCAACTGGGATAATGAAGCGACCATGATTGAAA-ACATTGCCACTGATATTTCGAAT-A 681
Query 630 -GCTGA-TTAGTTCTGCGCCATCTA-GTGATTTTGACGGTTTTGTTGGAATGAAAGCTCA 686
||||| ||| |||| ||||||| | |||||||||||||||| |||| |||| ||||||
Sbjct 682 TGCTGAATTA-TTCTACGCCATC-ACGTGATTTTGACGGTTTAATTGGGATGAGAGCTCA 739
Query 687 TATGGAAAATA-TAGAACC-ATTCTTCCGCCTAGACTCGGATGAAGTCAAAATGATAGGG 744
|||| ||| || | ||||| || || ||||| |||| |||||||| | ||||| ||
Sbjct 740 TATG-AAAGTAATGGAACCGATG-TTATGCCTACACTCCGATGAAGTGAGGATGATTGGA 797
Query 745 ATTTGTGGTCCTTCTGGAATTGGTAAGAGC-ACCATTGCCAGATT-TATATTTGGTGAAT 802
||||| ||||||||||| || || || | | |||||||| ||| | | ||||| | |||
Sbjct 798 ATTTGGGGTCCTTCTGGGATCGGGAAAA-CTACCATTGCTAGAATCT-TATTTAGCCAAT 855
Query 803 ACTCTC-ATGAGTTC-GAGCTAAGTGTCTTCATGGAAAATATCAAA-AG--AC-GTTATC 856
| | | |||| || | |||||||| ||||| ||| | || || | || ||
Sbjct 856 T-TAGCGAC-AGTTTTGAATTGAGTGTCTTTATGGAGAATGTTAAGGAGTTAATGT-ATA 912
Query 857 CAAGACC--T-TGTTAC-GATGAGTACAGTATGAAA-TTGCAATTACA-AAAGGAGTTTT 910
||||||| | |||| | ||||| |||||| ||| || || ||||| ||| ||||
Sbjct 913 CAAGACCGGTGTGTT-CTGATGAATACAGTGC-AAAGTTACACTTACAGAAAC-AGTTCA 969
Query 911 TGTCTCAAATAATGAACCAGGAGGATATAAAGATTCATCATTTAGGAGTTGCAAAAGA 968
|||| || || || ||||| | ||||| |||||| ||| ||||||||| | ||||
Sbjct 970 TGTCCCAGATTATCAACCACAAAGATATCGAGATTCCTCACCTAGGAGTTGTAGAAGA 1027
> AT1G69550.1 | Symbols: | disease resistance protein (TIR-NBS-LRR
class) | chr1:26148021-26153555 REVERSE LENGTH=5199
Length=5199
Score = 507 bits (274), Expect = 2e-142
Identities = 685/875 (78%), Gaps = 61/875 (7%)
Strand=Plus/Plus
Query 115 CCTCCATCTTCTTTGTCTTACA-AGTGGAAACACGACGTCTTTCCAAGCTTCCGTGGTGT 173
|||||||| |||||||||| || | ||| ||| | || ||||||||||||||||| |
Sbjct 389 CCTCCATCATCTTTGTCTTGCACCG-GGACTCACCATGTATTTCCAAGCTTCCGTGG-GG 446
Query 174 A-GATGTCCGTC-GGGACTTTCTCAGTCATATTCAGAAGGAGTTCCAAAGAAAAGGAATC 231
| || || || | | ||||||||||||| ||||| |||||||| | ||||||||||||
Sbjct 447 ATGACGTTCG-CAGAAACTTTCTCAGTCACATTCAAAAGGAGTTTCGGAGAAAAGGAATC 505
Query 232 ACACCGTTCATCGATAATGAGATCAAGAGAGGAGAATCCATTGGTCCTGAACTTA-TACA 290
|| |||||||||||||||||||| | ||||||||||||||| ||||||||||| | || |
Sbjct 506 ACTCCGTTCATCGATAATGAGATTAGGAGAGGAGAATCCATCGGTCCTGAACTCATTA-A 564
Query 291 GGCCATTAGAGGGTCTAAGATCGCGA-TCATCTTGCTCTCAAAGAACTATGCTTCTTCAA 349
||||||||||| ||||||||||| | | || ||||||| | |||||||||||||||||
Sbjct 565 GGCCATTAGAGAATCTAAGATCGCAATTGTTC-TGCTCTCGAGGAACTATGCTTCTTCAA 623
Query 350 AGTGGTGTCTTGACGAATTGGTGGAGATTATGAAGTGTAGAGAA-GAGTTAGGTCAAACT 408
||||||||||||| |||||||||||||||||||| || | |||| ||||| |||| |||
Sbjct 624 AGTGGTGTCTTGAAGAATTGGTGGAGATTATGAAATGCA-AGAAAGAGTTTGGTCTAACA 682
Query 409 GTGATGGCCATTTTCTATAAAGTAGATCCATATGATGTAAAGAAGCAGGTCGGAGAATTT 468
||| | |||||||||||| |||| ||||||| |||| ||||||| ||||||||||
Sbjct 683 GTGTTTGCCATTTTCTATGAAGTTGATCCATCCCATGTTAAGAAGCTTACCGGAGAATTT 742
Query 469 GGCAAG--GT-TTTCAGAAAAACTTGTGCTGGTA-ACACTAAGGAGGACATTAAAAGATG 524
|| | | || |||||||||| ||||| |||| | || |||||| | |||| |||||
Sbjct 743 GG-A-GCTGTCTTTCAGAAAA-CTTGTAAGGGTAGA-ACAAAGGAGAATATTATGAGATG 798
Query 525 GAGACAAGCTTTAGGAAAAG-TGGCCACAATTGCGGGTTACCATTCAAGCAATTGGGATA 583
|||||||||||| | | || | || |||||||| |||||| ||||||| || ||||| |
Sbjct 799 GAGACAAGCTTTTG-AGGAGGTTGCTACAATTGCTGGTTACGATTCAAGAAACTGGGAAA 857
Query 584 ATGAAGCGGCCATGATCGAA-AGACTCGCCATTGATGTTTCCAATGAGCT-GATTAGTTC 641
||||||| |||||||| ||| | | | |||||||| ||||||| || | ||||| |||
Sbjct 858 ATGAAGCTGCCATGATTGAAGAAATT-GCCATTGAAATTTCCAAA-AGATTGATTAATTC 915
Query 642 -TGCGCCAT-CTAGTGATTTTGACGGTTTTG-TTGGAATGAAAGCTCATATGGAAAATAT 698
| | || | | |||| ||||| ||||| | |||| |||||||||||||| ||||| ||
Sbjct 916 CT-CACCGTTC-AGTGGGTTTGAAGGTTT-GATTGGGATGAAAGCTCATATAGAAAAGAT 972
Query 699 AGAACCA-TT-CTTCCGCCTAGACTCG---GATGAA-GTCAAAATGATAGGGATTTGTGG 752
||| || || ||| |||| || || |||||| | | | | | || |||| ||
Sbjct 973 -GAAACAGTTGCTTT-GCCTCGATTCAACAGATGAAAGG-AGGACGGTTGGTATTTCAGG 1029
Query 753 TCCTTCTGGAATTGGTAAGAGCACCATTGCCAGATTTATATTTGGTGAA-TACTCTCATG 811
|||||||||||||||||||||||| ||||| ||| || || | | || | |||| |||
Sbjct 1030 TCCTTCTGGAATTGGTAAGAGCACTATTGCTAGAGTTCTACATAATCAAAT-CTCTGATG 1088
Query 812 AGTT--CGAGCTAAGTGTCTTCATGGAAAATATCAAAAGACGTTATCCAAGACC--TT-G 866
||| | | | ||||| |||||| ||| | ||||| | ||||| ||||||| || |
Sbjct 1089 -GTTTTCAAA-TGAGTGTTTTCATG-AAA-T-TCAAACCAAGTTATACAAGACCAATTTG 1143
Query 867 TTAC-GATGAGT-AC-AGTATGAAATTGCAATTACAAAAGGAGTTTTT-GTCTCAAATAA 922
|| | ||||| | || | | |||| ||||||||| | || | ||| | | ||||| | |
Sbjct 1144 TT-CTGATGA-TCACGA-TGTGAAGTTGCAATTAGAGCAGCAATTTCTAG-CTCAATTGA 1199
Query 923 TGAACCAGGAGGATATAAAGATTCATCATTTAGGA 957
| ||||| |||||||| ||||||||||| ||||||
Sbjct 1200 TTAACCAAGAGGATATCAAGATTCATCAGTTAGGA 1234
> AT3G44670.1 | Symbols: | Disease resistance protein (TIR-NBS-LRR
class) family | chr3:16216950-16221617 FORWARD LENGTH=3965
Length=3965
Score = 342 bits (185), Expect = 6e-93
Identities = 699/940 (74%), Gaps = 64/940 (7%)
Strand=Plus/Plus
Query 56 TTTTAAGAAAATTTAGA-TCCGAACAAGAAAACAAAGA-AATCAA--TTCT-C-CT-TCT 108
|||| | |||||| ||| ||| ||||||| |||||| | | | || |||| | | |||
Sbjct 296 TTTT-ACAAAATTCAGATTCC-AACAAGACAACAAATATACTAAATCTTCTGCTTTATCT 353
Query 109 -TT--ATCACCTCCATCTTCTTTGTCTTAC-AA-GTGGAAACACGACGTCTTTCCAAGCT 163
|| ||| |||||| |||| |||| | | || ||||||||| ||||||| || ||||
Sbjct 354 CTTCCATCTCCTCCAACTTCAGTGTC-T-CGAATCTGGAAACACCACGTCTTCCCGAGCT 411
Query 164 TCCGTGGTGTAGATGTCCGTCGGGA-CTTTCTCAGTCATAT--TCAGAAGGAGTTCCA-A 219
||| || | |||||| || | | |||| ||||| || || ||| ||| || |
Sbjct 412 TCCACGGGGCAGATGTTCG-AAAAACCATTCTTAGTCACATCCTC-GAA-TCGTT-CAGA 467
Query 220 AGAAAAGGAA-TCACACCGTTCATCGATAATGAGATCA-AGAGAGGAG-AA-TCCATTGG 275
||||| |||| | || || || || |||||| | || | ||||||||| || || || ||
Sbjct 468 AGAAAGGGAATTGAC-CCATTTATTGATAAT-A-AT-ATAGAGAGGAGTAAGTCGATCGG 523
Query 276 TCCTGAACTTATACAGGCCATTAGAGGGTCTAAGATCGCGATCATCTTGCTCTCAAAGAA 335
|| ||| || | | | || || | ||| || |||||||||||| ||||||||||||||||
Sbjct 524 TCATGAGCTCAAAGAAGCTATCAAAGGATCAAAGATCGCGATCGTCTTGCTCTCAAAGAA 583
Query 336 CTATGCTTCTTCAAAGTGGTGTCTTGACGAATTGGTGGAGATTATGAAGTGTAGAGAAGA 395
||||||||||||| ||||| ||||| ||||| | || || ||||||||||| |||
Sbjct 584 CTATGCTTCTTCATCTTGGTGCCTTGATGAATTAGCAGAAATCATGAAGTGTAGGGAATT 643
Query 396 GTTAGGTCAAACT-GTGATGGCCATTTTCTATAAAGTAGATCCATA-TGATGTAAAGAAG 453
||| ||||| | | || ||| | ||||||||| |||| |||||| | ||| |||||||
Sbjct 644 GTTGGGTCAGA-TAGTCATGACTATTTTCTATGAAGTGGATCCA-ACTGACATAAAGAAA 701
Query 454 CAGGTCGGAGAATTTGGCAAGGTTTTCAGAAAAACTTGTGCTGGTAACACTAAGGAGGAC 513
||| ||| |||||||| || | |||| |||||| ||| ||||| || || ||| |
Sbjct 702 CAGACCGGTGAATTTGGAAAAGCCTTCACAAAAACATGTAAAGGTAAAACAAAAGAGTAT 761
Query 514 ATTAAAAGATGGAGACAAGCTTTAGGAAAA-GTGGCCACAATTGCGGGTTACCATTCAAG 572
|| | ||||||||| ||||||| ||| | ||||||||||| || || | ||||| |
Sbjct 762 GTTGAGAGATGGAGAAAAGCTTT-GGAGGATGTGGCCACAATCGCCGGAGAACATTCTCG 820
Query 573 CAATTGG-GATAATGAAGCGGCCATGATCGA-AAGACTCGCCATTGATGTTTCCAATGA- 629
||| ||| | |||||||| | |||||| || || | | |||| ||||||||| || |
Sbjct 821 CAACTGGAGG-AATGAAGCAGACATGATTGAGAAAA-TAGCCACTGATGTTTCAAAC-AT 877
Query 630 GCTGATTAGTT-CTGCGCCATCTAGTGATTTTGACGGTTTTGTTGGAATGAAAGCTCATA 688
| | | ||||| | | ||||| || ||||| ||||| || || || |||| ||||||||
Sbjct 878 GTTAAATAGTTTCA-CACCATCAAGAGATTTCGACGGGTTAGTAGGGATGAGAGCTCATA 936
Query 689 TGGAAAATA-TAGAACCATTCTTCCGCCTAGACTCGGATGAAGTCAAA-ATGATAGGGAT 746
|||| | | | |||| ||| || |||||||| | ||||||||| || ||||| |||||
Sbjct 937 TGGATA-TGCTGGAACAATTGTTGCGCCTAGATTTGGATGAAGT-AAGGATGATCGGGAT 994
Query 747 TTGTGGTCCTTCTGGAATTGGTAAGAGCACC-ATTGCCAGATTTATATTTGGTGAA-TAC 804
||| || || |||| |||||||||| || | || ||||||||| | ||| | || | |
Sbjct 995 TTGGGGACCGCCTGGGATTGGTAAGA-CAACTATCGCCAGATTTCTGTTTAATCAAGT-C 1052
Query 805 TCT--CATGAGTTCGAGCTAAGTGTCTTCATGGAAAATATCAAAAGACGT-TATCCAAGA 861
|| || || ||| | || |||| | |||| | ||||||| | || | |||||||||
Sbjct 1053 TCCGACA-GA-TTCCAACTTAGTGCCATCATTGTGAATATCAGAGGAA-TCTATCCAAGA 1109
Query 862 CCTTGTTACGATGAGTACAGTATGA-AATTGCAATTACAAAAGGAGTTTTTGTCTCAAAT 920
||||||| ||||||||||||| | |||||||| ||||||| | | ||||| || ||
Sbjct 1110 CCTTGTTTCGATGAGTACAGTGC-ACAATTGCAACTACAAAACCAAATGTTGTCCCAGAT 1168
Query 921 AATGAACCAGGAGGATATAAAGATT-CATCATTTAGGAGT 959
|| || || | ||||| | |||| | ||||||||||||
Sbjct 1169 GATCAATCATAAAGATATCATGATTTC-TCATTTAGGAGT 1207
> AT5G11250.1 | Symbols: | Disease resistance protein (TIR-NBS-LRR
class) | chr5:3587978-3591960 REVERSE LENGTH=3570
Length=3570
Score = 327 bits (177), Expect = 2e-88
Identities = 445/570 (78%), Gaps = 35/570 (6%)
Strand=Plus/Plus
Query 970 AGTCGCATTATCATCACAACACAAGAT-A-AAAGGCTTCTGA-ATGCTCATGGGATTAAC 1026
||||| || ||||| |||||||||||| | ||| ||| | | | || ||||||||||||
Sbjct 1111 AGTCGAATCATCATTACAACACAAGATCAGAAA--CTTTTTAGA-GCACATGGGATTAAC 1167
Query 1027 CATATTTATGAGGTGG-GTTACTCACCTGAA--GAAGAGGCTCTTCAAATCTTCTGCATG 1083
|||||||| |||||| || | |||| || |||||||||||||||||||||||||||
Sbjct 1168 CATATTTACAAGGTGGATTTTC-CACC--AACTGAAGAGGCTCTTCAAATCTTCTGCATG 1224
Query 1084 TATGCTTTTGGTCAAA-TGTCTCC-ATATGATGGTTTTGAGAATCTTGCTTGGGAAGTTA 1141
|||||||||||||||| | || || | | ||||||||| |||| ||||||||| |||| |
Sbjct 1225 TATGCTTTTGGTCAAAAT-TCCCCTAAA-GATGGTTTTCAGAACCTTGCTTGGAAAGTAA 1282
Query 1142 CGAAA-CTTTCGGGTAAACTCCCTTTGGGACTAAGGGTAATGGGATCTTATTTCAGAGGA 1200
||| ||| | ||||| ||||||||||| ||||| | ||||| || ||||| || |||
Sbjct 1283 T-AAATCTTGCCGGTAACCTCCCTTTGGGGCTAAGAATTATGGGCTCCTATTTTAGGGGA 1341
Query 1201 ATGTCTA-AGCATGAGTGGGAAAAGGAACTACCAAGGTTA-AGGACTAGCCTTGATGGAA 1258
||||| | || | |||||| ||||| | ||||||| ||| || | ||||||||| |
Sbjct 1342 ATGTCGAGAGAA-GAGTGGAAAAAGTCATTACCAAGATTAGAG-AGTAGCCTTGACGCTG 1399
Query 1259 AAATTGAAAGCATTTTAAAGTTTAGTTATGATGCCTTACG-TGAAGAAGATAAAGATTTA 1317
| ||| |||||||||| ||||| || ||||| || ||| | ||| ||||||||| |||||
Sbjct 1400 ATATTCAAAGCATTTTGAAGTTCAGCTATGACGCTTTA-GATGACGAAGATAAAAATTTA 1458
Query 1318 GTTCTTTGTATAGCCTGGTTTATCAACAATGAATG-GATTGAGAAAGTGGAAGAGCATCT 1376
||||| |||||| || ||| ||||| | || | |||| ||| | |||||||||||||
Sbjct 1459 TTTCTTCATATAGCATGTTTTTTCAACGGTAAA-GAGATTAAGATATTGGAAGAGCATCT 1517
Query 1377 CCCAAAGAA-TTTAGTTGAGGTGAGCCAAGGTCTTCACGTCTTAGCCGAGAAATCTCTCA 1435
||||||| ||| || || || || ||| | ||| |||||||||| |||||||||||||
Sbjct 1518 TGCAAAGAAGTTT-GTGGAAGTCAGGCAAAGACTTAACGTCTTAGCTGAGAAATCTCTCA 1576
Query 1436 TGTCTATCAGCG-TCGGATA--TATATG-GATGCATAATTTGGTAGCACGTTTGGGTAGA 1491
| ||| | ||| | || | |||| | ||||||||| || ||||| | ||| ||
Sbjct 1577 TATCTTTTAGCAATTGGGGAACTATA-GAGATGCATAAACTGCTAGCAAAACTAGGTGGA 1635
Query 1492 -AAGATTGTTCGTAAACAATCCATTCATGA 1520
|| ||||||||||| ||||| || |||||
Sbjct 1636 GAA-ATTGTTCGTAACCAATCTATCCATGA 1664
> AT3G04210.1 | Symbols: | Disease resistance protein (TIR-NBS
class) | chr3:1105963-1108069 REVERSE LENGTH=1940
Length=1940
Score = 154 bits (83), Expect = 3e-36
Identities = 217/282 (77%), Gaps = 8/282 (3%)
Strand=Plus/Plus
Query 970 AGTCGCATTATCATCACAACACAAGATAAAAGGCTTCTGAATGCTCATGGGATTAACCAT 1029
||||| ||||||||||| || |||||| ||| ||| |||| || ||||| || || ||
Sbjct 1184 AGTCGGATTATCATCACCACGCAAGATCGAAGACTTTTGAAAGCACATGGAATCAAAGAT 1243
Query 1030 ATTTATGAGGTGG-GTTACTCACCTGAAGAAGAGGCTCTTCAAATCTTCTGCATGTATGC 1088
| || |||||| |||| |||| || || ||| ||||||||||||||||||||||
Sbjct 1244 GTGTACAAGGTGGATTTAC-CACCACCTGATGATGCTTTTCAAATCTTCTGCATGTATGC 1302
Query 1089 TTTTGGTCAAATGTCTCCATATGATGGTTTTGAGAATCTTGCTTGGGAAGTTACGAAAC- 1147
||||||| ||| |||||| | ||||||| ||| | ||||| ||||||| ||| | ||
Sbjct 1303 TTTTGGTAAAACCTCTCCAAAACATGGTTTCGAGGAGCTTGCATGGGAAGCTAC-ATACC 1361
Query 1148 TTTCGGGTAAACTCCCTTTGGGACTAAGG-GTAATGGGATCTTATTTCAGAGGAA-TGTC 1205
|||| |||| || ||||| |||| ||| ||| |||| ||||||||| | | || ||||
Sbjct 1362 TTTCTGGTATACACCCTTCGGGAATAAAAAGTA-TGGGCTCTTATTTCCG-GAAAATGTC 1419
Query 1206 TAAGCATGAGTGGGAAAAGGAACTACCAAGGTTAAGGACTAG 1247
|| | ||||||| ||| | ||| |||||||||||||||
Sbjct 1420 AAAACCGGAGTGGGTAAACGCGTTACAAAGGTTAAGGACTAG 1461
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 85591929225
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5