BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg890053
Length=2559
Score E
Sequences producing significant alignments: (Bits) Value
AT4G21370.1 | Symbols: PSEUDOSRKA | S-locus protein kinase, put... 2359 0.0
AT4G21380.1 | Symbols: ARK3, RK3 | receptor kinase 3 | chr4:113... 1223 0.0
AT4G21366.1 | Symbols: | Protein kinase superfamily protein | ... 394 2e-108
> AT4G21370.1 | Symbols: PSEUDOSRKA | S-locus protein kinase, putative
| chr4:11383884-11387136 REVERSE LENGTH=2559
Length=2559
Score = 2359 bits (1277), Expect = 0.0
Identities = 2150/2559 (84%), Gaps = 110/2559 (4%)
Strand=Plus/Plus
Query 1 ATGAGACGTGAAGTACCAAACAAACACCATTATTACAGCTTCAGCTTCGTCTTCCTCTTC 60
|||||| ||||| |||||||||||||||||| ||||| ||| |||||| ||||| |||
Sbjct 1 ATGAGAGGTGAATTACCAAACAAACACCATTCTTACACCTT---CTTCGTTTTCCTTTTC 57
Query 61 TTTTTCTTAATTCTGTTCCCTGATTTCTCTATCTCTACCAACACTTTGTCAGCTACAGAA 120
|| ||||||||||||||||||||| ||||||||||| ||| ||||||||||||||||||
Sbjct 58 TTCTTCTTAATTCTGTTCCCTGATCTCTCTATCTCTGTCAATACTTTGTCAGCTACAGAA 117
Query 121 TCTCTGACTATTTCAAGCAACAAAACCATTGTGTCT-CTGGGTGATGTCTTCGAGCTTGG 179
|| ||||| || |||||||||||||||||||||||| || |||| |||||||||||||||
Sbjct 118 TCCCTGACAATCTCAAGCAACAAAACCATTGTGTCTCCT-GGTGGTGTCTTCGAGCTTGG 176
Query 180 TTTCTTTACAATCCTTGGTGATAGTTGGTATCTTGGGATTTGGTACAAGAAAATCCCTGA 239
|||||| | ||||||||| ||||||||||| |||||||||||||||||||||||| || |
Sbjct 177 TTTCTTCAGAATCCTTGGGGATAGTTGGTACCTTGGGATTTGGTACAAGAAAATCTCTCA 236
Query 240 GAAAACCTATGTTTGGGTTGCAAATAGAGATAATCCTATCTCTACTTCC-ACTGGAATCC 298
|| ||||||||| |||||||| |||||||| | |||| |||||| ||| | ||||||||
Sbjct 237 GAGAACCTATGTATGGGTTGCCAATAGAGACACTCCTCTCTCTA-ATCCTATTGGAATCC 295
Query 299 TCAAAATCTCCAATGCTAACCTTGTCCTCCTAAATCACTT-TGATACCCCTGTTTGGTCA 357
|||||||||||||||||||||||||| |||| || | || |||||| | ||||||||||
Sbjct 296 TCAAAATCTCCAATGCTAACCTTGTCATCCTCGAT-AATTCTGATACGCATGTTTGGTCA 354
Query 358 ACCAATCTAAC-GGCAGAGGTGAAATCTCCAGTGGTGGCAGAGCTTCTGGATAACGGAAA 416
|| ||||| || || | ||||| |||| | ||||||||||||||||| || || || ||
Sbjct 355 ACGAATCTGACTGG-TGCGGTGAGATCTTCTGTGGTGGCAGAGCTTCTTGACAATGGCAA 413
Query 417 TTTCGTGCTAAGGGACTCCAAAACCAATGGCTCAGATGAATTTTTGTGGCAGAGCTTT-G 475
||| || ||||||| |||||||| ||||| |||||||| |||||||||||||| ||| |
Sbjct 414 TTTTGTTCTAAGGGGCTCCAAAATCAATGAATCAGATGAGTTTTTGTGGCAGAG-TTTCG 472
Query 476 ATTTCCCGACAGATACTTTACTACCGCAGATGAAGTTGGGTCTGGATCACaaaaaaaGGC 535
|||||||||||||||||||| ||||||||||||| ||||||| ||||||||||| | |||
Sbjct 473 ATTTCCCGACAGATACTTTATTACCGCAGATGAAATTGGGTCGGGATCACAAAAGAGGGC 532
Query 536 TCAACAAATTTCTTC-GTTCCTGGAAAAGTTCATTTGATATGTCAAGTGGGGA-TTAT-T 592
| |||| | ||| || ||||||||||| ||||||||| |||||| |||| || |
Sbjct 533 TTAACAGA-TTCGTCACATCCTGGAAAAGCTCATTTGATCCGTCAAG-CGGGAGTT-TCA 589
Query 593 TGTTCAAAATCGAAACTCTAGGGCTACCTGAGTTTTTT-ATTTGGATGAGTGACTTTAG- 650
|||||||| ||||||||||||| |||||||||||||| ||| | || ||| |
Sbjct 590 TGTTCAAACTCGAAACTCTAGGATTACCTGAGTTTTTTGGTTT-TACCAG-CTTTTTGGA 647
Query 651 AGTGTTCCGGAGCGGCCCTTGGAACGGAATCCGATTTAGCGGCATGCTGGAGATGCAAAA 710
||||| |||||||||||||||| | ||| |||| ||||||||||| |||||||||||| |
Sbjct 648 AGTGTACCGGAGCGGCCCTTGGGATGGACTCCGGTTTAGCGGCATTCTGGAGATGCAACA 707
Query 711 ATGGGACGACATTATTTATAATTTAACGGAGAATAAAGAGGAGGTCGCTTTCACTTTCCG 770
||||||||| ||||| || || || |||||||||| |||||||||||||| |||||||||
Sbjct 708 ATGGGACGATATTATCTACAACTTCACGGAGAATAGAGAGGAGGTCGCTTACACTTTCCG 767
Query 771 ACCAACTGACCACAACCT-CTACTCGAGATTGACAATAAATTA-CG-CGG-GGTTATTAC 826
| || |||||||| || |||||| |||||||||||||| || || || | | |||
Sbjct 768 AGTTACCGACCACAA-CTCCTACTCAAGATTGACAATAAA-TACCGTAGGACG-T-TTAG 823
Query 827 AGCAATTTACCTGGGATCCGATATACA--AAGAATGGAACATGTTATGGTCTACATCAAC 884
|| ||| || ||||| || | | ||| |||| ||||||||||| |||| || |||
Sbjct 824 AGGGATTCACGTGGGAACC-A-ACACAGCAAGAGTGGAACATGTTCTGGTTTATGCCAAA 881
Query 885 GGACAACGCGTGTGAGACCTAT--AATCCTTGTGGTCCTTACGCTTACTGTGACATGAGC 942
|||| | | ||||| ||| ||| |||||||||||||||||||||||||||||||
Sbjct 882 GGAC-A--CTTGTGATTTGTATGGAAT--TTGTGGTCCTTACGCTTACTGTGACATGAGC 936
Query 943 ACGTCACCAATGTGTAACTGTGTCGAAGGGTTTAAACCGAGGAACCCGCAAGAATGGGCG 1002
|||||||||| |||||||||| || |||| ||| ||||| | ||||||||| |||||
Sbjct 937 ACGTCACCAACGTGTAACTGTATCAAAGGATTTCAACCGCTGTCCCCGCAAGATTGGGC- 995
Query 1003 TT-GGGAGACGTGAGGGGTAGATGTCAAAGGACGACACCA-TTGAACTGCGGTAG-AGAT 1059
|| |||||||||| |||||||||| ||||| |||| || |||| ||||||| | ||||
Sbjct 996 TTCCGGAGACGTGACAGGTAGATGTCGAAGGAAGACA-CAGTTGACCTGCGGT-GAAGAT 1053
Query 1060 -GGCTT-TACACAGCTGAGGAAAATAAAGTTGCCAG-ATACTACGGCAGCGATCGTGGAC 1116
|| || | | ||||| ||| || ||| | || | | ||||| |||||||| ||||||
Sbjct 1054 AGG-TTCT-TTCGGCTGATGAACATGAAGATACCGGCA-ACTACTGCAGCGATTGTGGAC 1110
Query 1117 AAGAGAATTGGGTTTAAGGATTGTAAAGAGAGGTGCGCTAAG--AC-TTGTAATTGTACT 1173
|||||||||||||| || || ||| |||||| || || ||| || |||||| |||||
Sbjct 1111 AAGAGAATTGGGTTGAAAGAATGTGAAGAGAAGT--GC-AAGACACATTGTAACTGTACC 1167
Query 1174 GCGTTTGCTAA-TACCGACATTCGAAATGGTGGTTCAGGTTGTGTGATTTGGATCGGAAG 1232
|||| ||| || | |||| |||||||||||||||||||||||| | || |||||||| ||
Sbjct 1168 GCGTATGCAAACT-CCGATATTCGAAATGGTGGTTCAGGTTGTATAATATGGATCGG-AG 1225
Query 1233 -GTTT-GTGGATATCCGAAATTATGCTGCCGATGGTCAAGATCT-TTATGTTAGAGTGGC 1289
|||| | ||||||||||||||| ||||| || ||||||||||| || |||| || ||||
Sbjct 1226 AGTTTCG-GGATATCCGAAATTACGCTGCAGACGGTCAAGATCTATT-TGTTCGATTGGC 1283
Query 1290 CGCTGCTA-A-TATCGGGGACAGAA-AACACATTAGTGGACAAATTATAGGTTTGATTGT 1346
||||| | | | ||||||| |||| ||| ||||| ||| |||| |||||||||||| |
Sbjct 1284 AGCTGC-AGAGT-TCGGGGAGAGAAGAAC-TATTAGAGGAAAAATCATAGGTTTGATTAT 1340
Query 1347 TGGAGTAAGCTTGCTGCTTCTTGTGAGTTTCATCATGTACTGGTTTTGGAAAAAGAAACA 1406
|||| | ||||| ||||| || ||||||||||||| ||||| |||||||||||||||||
Sbjct 1341 TGGAATCAGCTTAATGCTTGTTCTGAGTTTCATCATTTACTGTTTTTGGAAAAAGAAACA 1400
Query 1407 GAAGCAAGCAAGAGCAACTGCAGCTCCTAAT-GTGTATCGCGAGAGAACTC---AA--CA 1460
||||| |||||||||||| ||||| ||| || | |||||| || |||| || || |
Sbjct 1401 GAAGCGAGCAAGAGCAACCGCAGCACCT-ATCGGGTATCGAGACAGAATTCAAGAATTAA 1459
Query 1461 -TCTAACCAATGGGGTGGTAATATCCAGCGGGAGACACTTGTTTGGCGAGAACAAAACAG 1519
| ||||||||||||||||||| || || ||||||| |||| |||| | | | | ||
Sbjct 1460 TTATAACCAATGGGGTGGTAATGTCAAGTGGGAGACGCTTGCTTGG-G-G---AGGA-AG 1513
Query 1520 AGGAATTGGAACTTCCACTCACGGAGTTTGAAGCTGTTGTTATGGCAACCGATAATTTCT 1579
|||| ||||||||||||||||||||||||||| ||||||| ||||| ||||| |||||||
Sbjct 1514 AGGACTTGGAACTTCCACTCACGGAGTTTGAAACTGTTGTCATGGCCACCGAAAATTTCT 1573
Query 1580 CTGATTCCAACATACTTGGACAG-GGTGGTTTTGGTGTCGTGTACATGGGAAGGTTACCT 1638
||||||||||||||||||||| | |||||||| ||| | || |||| ||||||||||| |
Sbjct 1574 CTGATTCCAACATACTTGGAC-GAGGTGGTTTCGGTATTGTATACAAGGGAAGGTTACTT 1632
Query 1639 GACGGGCAGGAGATTGCTGTGAAAAGACTATCA-ATGGTGTCA-CTGCAAGGGGTCAATG 1696
|||||| | ||||||| ||||||||| ||||| | | ||||| || ||||| |||||
Sbjct 1633 GACGGGTAAAAGATTGCAGTGAAAAGATTATCAGA-GATGTCATCT-CAAGGAACCAATG 1690
Query 1697 AGTTCAAGAACGAGGTGAAGCTGATCGCGAGACTTCAACACATAAATCTTGTTCGACTTT 1756
|||||||||||||||||| ||| ||||| || ||||||||||| || ||||| || |||
Sbjct 1691 AGTTCAAGAACGAGGTGAGGCTAATCGCAAGGCTTCAACACATCAACCTTGTCCGGCTTC 1750
Query 1757 TTAGTTGTTGTATCTACGCGGATGAGAAGATATTGATCTATGAGTACTTGGAGAATGGAA 1816
|||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||||||
Sbjct 1751 TTAGTTGTTGCATCTACGCGGATGAGAAGATATTGATTTATGAATACTTGGAGAATGGAA 1810
Query 1817 GCCTCGATTCTCATCTCTTC-AAAAAAGTCCAAAGCTC---TAAGCTAAACTGGCAAAAG 1872
|||| ||||||||||||||| ||| || ||||||||| ||||||||||||||||| |
Sbjct 1811 GCCTTGATTCTCATCTCTTCGAAACAA-CCCAAAGCTCTAATAAGCTAAACTGGCAAACG 1869
Query 1873 AGATTCAACATTATTAATGGTATTGCTCGAGGACTTTTGTATCTTCACCAAGACTCACGG 1932
||||| | |||||| ||||||||||||||||||||||| || ||||||||||| ||| ||
Sbjct 1870 AGATTTAGCATTATCAATGGTATTGCTCGAGGACTTTTATACCTTCACCAAGATTCAAGG 1929
Query 1933 TTTAAGATTATCCATAGAGATTTGAAAGCGAGCAACGTCTTGCTTGATAAAGATATGATC 1992
|||||||||||||| |||||| |||| || ||||| || |||||||||||| |||||| |
Sbjct 1930 TTTAAGATTATCCACAGAGATCTGAAGGCAAGCAATGTATTGCTTGATAAAAATATGA-C 1988
Query 1993 -CCGAAGATCTCGGATTTCGGGATGGCTAGGATATTTGGACGGGAGGAGACCGAAGCTAG 2051
|| |||||||||||||| ||||||||||||||||||| | |||| ||||| |||||||
Sbjct 1989 TCCAAAGATCTCGGATTTTGGGATGGCTAGGATATTTGAAAGGGACGAGACGGAAGCTAA 2048
Query 2052 CACCAAGAAGGTGGTTGGAACATACGGTTACATGTCTCCAGAATACGCAATGGACGGGAT 2111
||||| ||||||||||||||| ||||| ||||||||||| |||||||||||||| |||||
Sbjct 2049 CACCAGGAAGGTGGTTGGAACTTACGGCTACATGTCTCCCGAATACGCAATGGAGGGGAT 2108
Query 2112 ATTCTCAGTAAAATCGGATGTCTTCAGCTTTGGGGTATTGGTTCTTGAAATTGTCAGTGG 2171
|||||| |||||||||||||| |||||||| ||||| ||||||||||| |||||||||||
Sbjct 2109 ATTCTCGGTAAAATCGGATGTTTTCAGCTTCGGGGTTTTGGTTCTTGAGATTGTCAGTGG 2168
Query 2172 AAAGAGGAACAGAGGATTCTACAACT-CGAACCAGGACAATAATCTTCTTAGCTACACGT 2230
||||||||||||||||||| |||||| || ||| |||||||||||||| |||||||||
Sbjct 2169 AAAGAGGAACAGAGGATTCCACAACTCCG-GCCAAGACAATAATCTTCTCGGCTACACGT 2227
Query 2231 GGGATCATTGGAAGGAAGGAAAATGGCTAGAGATCGCCGATCCAATCATTGTAGGCACAT 2290
|||| ||||||| ||||||||| |||||||||||| |||| | || ||||||| | |
Sbjct 2228 GGGAGAATTGGAAAGAAGGAAAAGGGCTAGAGATCGTCGATTCGATAATTGTAGATTCCT 2287
Query 2291 CATCATC-ATCGTCAACGTTCCGACCACACGAAGTCTTAAGATGCTTACAGATTGGTCTC 2349
||||||| || |||| ||||| |||||| ||||||||||||||| |||||||||||||
Sbjct 2288 CATCATCAAT-GTCATTGTTCCAACCACATGAAGTCTTAAGATGCATACAGATTGGTCTT 2346
Query 2350 TTATGTGTTCAAGAACGTGCAGAGGACAGACCAAAGATGTCGTCGGTGGTTTTCATGCTA 2409
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 2347 TTATGTGTTCAAGAACGTGCAGAGGACAGACCAAAGATGTCGTCGGTGGTTTTAATGCTC 2406
Query 2410 GGAAATGAAAAAGGGGAAATACCTCAGCC-TAAACCGCCTGGTTATTGCATCGGAAGAAG 2468
|| | |||||||||||| ||| |||||| ||||| ||| ||||||||| || |||||||
Sbjct 2407 GGTAGCGAAAAAGGGGAA-TACTTCAGCCCTAAACGGCCCGGTTATTGCGTCAGAAGAAG 2465
Query 2469 TTTTCTTGAGACTG---ATTCGTCATCCAGTACACAACG 2504
|| |||||| |||| |||||||||| |||||| ||||
Sbjct 2466 TTCTCTTGATACTGCTGATTCGTCATCGAGTACAAAACG 2504
Score = 89.8 bits (48), Expect = 1e-16
Identities = 48/48 (100%), Gaps = 0/48 (0%)
Strand=Plus/Minus
Query 2350 TTATGTGTTCAAGAACGTGCAGAGGACAGACCAAAGATGTCGTCGGTG 2397
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2559 TTATGTGTTCAAGAACGTGCAGAGGACAGACCAAAGATGTCGTCGGTG 2512
> AT4G21380.1 | Symbols: ARK3, RK3 | receptor kinase 3 | chr4:11388925-11393226
REVERSE LENGTH=2983
Length=2983
Score = 1223 bits (662), Expect = 0.0
Identities = 1973/2590 (76%), Gaps = 154/2590 (6%)
Strand=Plus/Plus
Query 50 TCTTCCTCTTCTTTTTCTTAATTCTGTTCCCTGATTTCTCTATCTCTACCAACACTTTGT 109
||||| ||||||| |||||||||||||||||| || |||||||||| ||||||||||||
Sbjct 174 TCTTCTTCTTCTTCCTCTTAATTCTGTTCCCTGCTTACTCTATCTCTGCCAACACTTTGT 233
Query 110 CAGCTACAGAATCTCTGACTATTTCAAGCAACAAAACCATTGTGTCT-CTGGGTGATGTC 168
| ||| |||||||||| ||||| |||||||| || |||||||||||| || ||| |||||
Sbjct 234 CGGCTTCAGAATCTCTAACTATCTCAAGCAATAACACCATTGTGTCTCCT-GGTAATGTC 292
Query 169 TTCGAGCTTGGTTTCTTTACAATCC---TT-GGTGATAGTTGGTATCTTGGGATTTGGTA 224
||||||||||||||||| | || || || | | | ||||||||||||| ||||||||
Sbjct 293 TTCGAGCTTGGTTTCTTCA-AACCCGGTTTAGATTCTCGTTGGTATCTTGGAATTTGGTA 351
Query 225 CAAGAAAATCCCTGAGAAAACCTATGTTTGGGTTGCAAATAGAGATAATCCTATCTCTAC 284
|||| |||| || ||| |||||| || ||||||||||| ||||| | |||| ||||||
Sbjct 352 CAAGGCAATCTCTAAGAGAACCTACGTATGGGTTGCAAACAGAGACACTCCTCTCTCTAG 411
Query 285 TTCCACT-GGAATC-CTCAAAATCTCC-A-ATGCTAACCTTGTCCTCCTAAATCACTTTG 340
||||| | |||| | |||||||||||| | | | ||| |||||| | | |||| | |
Sbjct 412 TTCCA-TCGGAA-CTCTCAAAATCTCCGACA-G-TAATCTTGTCGTTTTGGATCAGTCCG 467
Query 341 ATACCCCTGTTTGGTCAACCAATCT-AAC-G-GCAGAGGTGAAATCTCCAGTGGTGGCAG 397
|||| || |||||||| || ||||| | | | | ||| |||| ||||||| |||||||||
Sbjct 468 ATACACCGGTTTGGTCGACGAATCTGACCGGAGGAGATGTGAGATCTCCATTGGTGGCAG 527
Query 398 AGCTTCTGGATAACGGAAATTTCGTGCTAAGGGACTCCAA-AACCAATG-GCT-CAGATG 454
||||||| ||||| || ||||| ||||| || |||||||| || | | | ||| ||||||
Sbjct 528 AGCTTCTTGATAATGGTAATTTTGTGCTCAGAGACTCCAAGAA-C-A-GCGCTCCAGATG 584
Query 455 AATTTTTGTGGCAGAGCTTTGATTTCCCGACAGATACTTTACTACCGCAGATG-AAGTTG 513
| ||||||||||||| |||||||| ||||||||||||||||| ||| ||||| || ||
Sbjct 585 GAGTTTTGTGGCAGAGTTTTGATTTTCCGACAGATACTTTACTTCCGGAGATGAAACTT- 643
Query 514 GGTCT-GGAT-CACaaaaaaaGGCTCAACAAATTTC-TTCGTTCCTGGAAAAGTTCATTT 570
|| || |||| | ||||| || |||||| | ||| || | || |||||| | || |
Sbjct 644 GG-CTGGGATGC-CAAAACCGGGTTCAACAGA-TTCATTAGATCATGGAAATCTCCAGAT 700
Query 571 GATATGTCAAGTGGGGATTAT-TTGTTCAAAATCGAAACTCTAGGGC-TACCTGAGTTTT 628
||| |||||||| |||| | | ||||||| ||||||| | | ||| | |||||| |||
Sbjct 701 GATCCATCAAGTGGAGATT-TCTCGTTCAAACTCGAAAC-CGAAGGCTTCCCTGAGATTT 758
Query 629 TTATTTGGATGAGTGACTTTA-GAGTGTTCCGGAGCGGCCCTTGGAACGGAATCCGATTT 687
|| | |||| || || | | || ||| |||||| || || ||||| |||||||| |||
Sbjct 759 TTCTATGGAACAGAGA-ATCACGAATGTACCGGAGTGGTCCATGGAATGGAATCCGGTTT 817
Query 688 AGCGGCATGCTGGAGATGCAAAAATGGGACGACATTATTTAT-AATTTAACGGA-GAATA 745
|| || | | |||||||||| || || |||| ||| | ||||| || | || ||
Sbjct 818 AGTGGTGTACCGGAGATGCAACCATTTGAATACATGGTTT-TCAATTTCAC-TACGAGTA 875
Query 746 AAGAGGAGGTCG-CTT--TCACTTTCCG-ACCAACTGACCA-CAACCTCTACTCGAGATT 800
|||| || || | ||| ||| ||| | | | ||| | | | || | |||||||||||
Sbjct 876 AAGAAGAAGT-GACTTACTCA-TTT-AGAATC-ACT-AAAAGCGACGTTTACTCGAGATT 930
Query 801 GA-CAATAAATTACGCGGGGTTATTACAGCA-ATTTACCTGGGATCCGATATA-CAAAGA 857
| | |||| | | | || || ||||| | ||| | || |||| || | | || |||
Sbjct 931 AAGC-ATAAGCTCCTCAGGATTGTTACA-AAGATTCA-CTTGGAT-TGAGACAGCACAGA 986
Query 858 A-TGGAA-CATGTTATGGT-CTACATCAACGGA-CAACGCGTGTGA-GACCTATAATCCT 912
| ||||| || || |||| | || ||| || ||| ||||| || || ||
Sbjct 987 ATTGGAACCA-ATTCTGGTAC-GCACCAAAAGACCAA----TGTGATGA-GTACAAAGAG 1039
Query 913 TGTGGTCCTTACGCTTACTGTGACAT-GAGCACGTCACCAATGTGTAACTGTGTCGAAGG 971
|||||| ||||| ||| || ||| | || ||| ||||| | ||||| ||| | ||||
Sbjct 1040 TGTGGTGTTTACGGTTATTGCGAC-TCGAACACTTCACCTGTTTGTAATTGTATTAAAGG 1098
Query 972 GTTTAAACCGAGGAACCCGCAAGAATGGGCG-TTGGGAGACGTGAGGGGTAGATGTC-AA 1029
|||||| |||||||| || |||| |||| | ||| |||||| | || | | || |
Sbjct 1099 GTTTAAGCCGAGGAATCCTCAAGTGTGGG-GATTGAGAGACGGGTCGGATGGTTG-CGTG 1156
Query 1030 AGGACGACACCATTGAACTGCGGT---AGAGATGGCTTTACACAGCTGAGGAAAAT-AAA 1085
|||| ||| | | ||| ||| ||| ||||||| ||| | | ||| |||||| |||
Sbjct 1157 AGGAAGACGCTACTGAGCTGTGGTGGCGGAGATGGGTTTGTGCGGTTGAAGAAAATGAAA 1216
Query 1086 GTTGCCAGATACTACGGCAGCGA-TCGTGGACAAGA-GAATTGGGT-TTAAGGATTGTAA 1142
||||| |||||||| | || | | |||||| ||| ||||| ||| | || || ||| |
Sbjct 1217 -TTGCCGGATACTACCACGGCTAGT-GTGGAC-AGAGGAATT-GGTGTGAAAGAATGTGA 1272
Query 1143 AGAGAGGTGCGCTAAGA-CTTGTAATTGTACTGCGTTTGCTAATACCGACATTCGAAATG 1201
| ||| ||| ||||| ||||||||| || |||||||| ||||| || || || |
Sbjct 1273 ACAGAAGTG-TTTAAGAGATTGTAATTGCACGGCGTTTGCGAATACGGATATCCGGGGTA 1331
Query 1202 GTGGTTCAGGTTGTGTGATTTGGATCGGA-AGGTTTGTGGATATCCGAAATTATGCTGCC 1260
| || || |||||||||| ||||| |||| || ||| | |||||| | ||||||||
Sbjct 1332 GCGGGTCGGGTTGTGTGACTTGGACCGGAGAGCTTT-TTGATATCAGGAATTATGCCAAA 1390
Query 1261 GATGGTCAAGATCTTTATGTTAGAGTGGCCGCTGCTAATATCGGGGACAGAAA-ACACAT 1319
| ||||||||||||||| |||||| |||| ||| || || ||| ||||| ||| | |||
Sbjct 1391 GGTGGTCAAGATCTTTACGTTAGATTGGCTGCTACTGATCTCGAGGACA-AAAGAAACAG 1449
Query 1320 TAGTGGACAAATTATAGGTTTGATTGTTGGAGTAAGC-TTGCTGCTTCTTGTGAGTTTCA 1378
|||| | |||| ||||||| || | ||||||| ||| || |||||||| | |||||||
Sbjct 1450 AAGTGCAAAAATCATAGGTTCGAGTATTGGAGTGAGCGTT-TTGCTTCTTTTAAGTTTCA 1508
Query 1379 TCATGTACTGGTTTTGGAAAAAGAAACAGAAGCAAGCAAGAGC-AACT-GCAGCTCCTAA 1436
| || | || || ||||||| ||| ||||||| | ||| | | || | | | | ||||
Sbjct 1509 TTATCTTCTTCTTGTGGAAAAGGAAGCAGAAGCGATCAATA-CTAA-TCGAAACACCTAT 1566
Query 1437 TG-TGTATC-GCGA--GAGAA-CTC-A-ACAT-CTAACCAATGGGGTGGTAATATCCAGC 1488
|| || ||| | | ||||| | | | | | |||| || | || |||||||| ||
Sbjct 1567 TGTTG-ATCATCAACTGAGAAGC-CGAGATTTGCTAATGAACGAAGTTGTAATATCAAGT 1624
Query 1489 GGGAGACACTTGTTTGGCGAGAACAAAACAGAGGAAT-TGGAACTT-CCACTCACGGAGT 1546
|||||||| | | | | || ||||| ||||| | || | ||| || ||| | | |||||
Sbjct 1625 AGGAGACACATATCTAGAGAAAACAATACAGACG-ATCTCGAA-TTGCCATTGATGGAGT 1682
Query 1547 TTGAAGCTGTTGTTATGGCAACCGATAATTTCTCTGATTCCAACATA-CTTGGACAGGGT 1605
|||||| |||| ||||| || | ||||| ||| | |||||| | || ||||| |||
Sbjct 1683 TTGAAGAAGTTGCCATGGCCACAAACAATTTTTCTAACGCCAACA-AGCTAGGACAAGGT 1741
Query 1606 GGTTTTGGTGTCGTGTACATGGGAAGGTTACCTGACGGGCAGGAGATTGCTGTGAAAAGA 1665
||||||||| | || || | ||||| ||||| ||| || || || || || ||||| |||
Sbjct 1742 GGTTTTGGTATAGTTTATAAGGGAAAGTTACTTGATGGTCAAGAAATGGCAGTGAAGAGA 1801
Query 1666 CTATCAATGGTGTCACTGCAAGGGGTC-AATGAGTTCAAGAACGAGGTGAAGCTGATCGC 1724
||||||| | ||| | | ||||| | ||||||||||||| ||||| ||| |||| ||
Sbjct 1802 CTATCAAAGACATCAGTTC-AGGGGACTGATGAGTTCAAGAATGAGGTAAAGTTGATTGC 1860
Query 1725 GAGACTTCAACACATAAATCTTGTTCGACTTTTTAG-TTGTTGTATCTACGCGGATGAGA 1783
|| ||||| |||||||| |||||| | ||| || | ||||| || | |||| |||||
Sbjct 1861 AAGGCTTCAGCACATAAACCTTGTTAGGCTTCTT-GCATGTTGCGTCGATGCGGGTGAGA 1919
Query 1784 AGATATTGATCTATGAGTACTTGGAGAATGGAAGCCTCGATTCTCATCTCTTCAAAAAAG 1843
|||| ||||| || ||||||||||| ||| ||||||||| |||||||| || | |||
Sbjct 1920 AGATGTTGATTTACGAGTACTTGGAAAATCTAAGCCTCGACTCTCATCTATTTGACAAA- 1978
Query 1844 T-CC-AAAGCTCTAAGCTAAACTGGCAAAAGAGATTCAACATTATTAATGGTATTGCTCG 1901
| || ||| |||||||||||| ||||||| |||||| | || || ||||||||||||||
Sbjct 1979 TCCCGAAA-CTCTAAGCTAAATTGGCAAATGAGATTTGATATCATCAATGGTATTGCTCG 2037
Query 1902 AGGACTTTTGTATCTTCACCAAGACTCACGGTTTAAG-ATTATCCATAGAGATTTGAAAG 1960
||||||| | |||||||||||||| ||||||||| || |||||||||||||| |||||||
Sbjct 2038 AGGACTTCTATATCTTCACCAAGATTCACGGTTT-AGAATTATCCATAGAGACTTGAAAG 2096
Query 1961 CGAGCAACGTCTTGCTTGATAAAGATATGATC-CCGAAGATCTCGGATTTCGGGATGGCT 2019
| || ||| |||||||||||||| |||||| | || ||||||||||||||||| ||||||
Sbjct 2097 CAAGTAACATCTTGCTTGATAAATATATGA-CTCCAAAGATCTCGGATTTCGGAATGGCT 2155
Query 2020 AGGATATTTGGACGGGAGGAGACCGAAGCTAGCACCAAGAAGGTGGTTGGAACATACGGT 2079
||||| ||||||||||| ||||| ||||||| || | ||||||||||||||| ||||||
Sbjct 2156 AGGATCTTTGGACGGGATGAGACAGAAGCTAATACGAGGAAGGTGGTTGGAACCTACGGT 2215
Query 2080 TACATGTCTCCAGAATACGCAATGGACGGGATATTCTCAG-TAAAATCGGATGTCTTCAG 2138
|| |||||||| ||||| |||||||||||||||||||| | | || || ||||| |||||
Sbjct 2216 TATATGTCTCCTGAATATGCAATGGACGGGATATTCTC-GATGAAGTCAGATGTTTTCAG 2274
Query 2139 CTTTGGGGTATTGGTTCTTGAAATTGTCAGTGGAAAGAGGAACAGAGGATTCTACAACTC 2198
|||||||| ||| ||||||| ||| | ||| | |||||||||| |||||||||||| ||
Sbjct 2275 TTTTGGGGTCTTGCTTCTTGAGATTATAAGTAGCAAGAGGAACAAAGGATTCTACAATTC 2334
Query 2199 GAACCAG-GACAATAATCTTCTTAGCTACACGTG-GGA-TCATTGGAAGGAAGGAAAATG 2255
| ||| | ||| ||| |||| | | | ||| ||| ||||||| ||||||||| |
Sbjct 2335 GGACC-GTGACCTTAACCTTC-TCGGT-TGTGTGTGGAGGAATTGGAAAGAAGGAAAAGG 2391
Query 2256 GCTAGAGATCGCCGATCCAATCATTGTAGGCACATCATCATCATCGTCAACGTTCCGACC 2315
|||||||||| |||||||||| | |||| || || || ||||| ||| | |
Sbjct 2392 GCTAGAGATCATAGATCCAATCA---T---CACA-GAT--TCTTCATCAACATTCAGGCA 2442
Query 2316 ACACGAAGTCTTAAGATGCTTACAGATTGGTCTCTTATGTGTTCAAGAACGTGCAGAGGA 2375
||| ||| ||||||||||| |||| ||||| ||||| |||||||||||||||||||||||
Sbjct 2443 ACATGAAATCTTAAGATGCATACAAATTGGCCTCTTGTGTGTTCAAGAACGTGCAGAGGA 2502
Query 2376 CAGACCAAAGATGTCGTCGGTGGTTTTCATGCTAGGAAATGAAA-AAGGGGAAATACCTC 2434
|||||||| ||||| | ||| |||| ||||| |||| ||| || | | ||||
Sbjct 2503 CAGACCAACTATGTCCTTGGTAATTTTGATGCTCGGAAGCGAATCAACAACTATT-CCTC 2561
Query 2435 AGCCTAAACCGCCTGGTTATTGCATCGGA-AGAAGTTTTCTTGAGACTGATTCGTCATCC 2493
| |||||| |||| ||||||||| | ||| |||||| ||||||| |||||||| || ||
Sbjct 2562 AACCTAAAGCGCCCGGTTATTGCCT-GGAGAGAAGTCTTCTTGACACTGATTCTTCGTCG 2620
Query 2494 AGTACACAACGC-A--ATGAATCTTCGACAATAAACCAA-TTCACTGTCTCGGTCATCAA 2549
|||| ||| ||| | ||||||| | |||| | |||||| || |||||||||||| | |
Sbjct 2621 AGTAAACAGCGCGACGATGAATCATGGACAGTGAACCAAATT-ACTGTCTCGGTCCTTGA 2679
Query 2550 CGCTCGGTAA 2559
|||||||||
Sbjct 2680 TGCTCGGTAA 2689
> AT4G21366.1 | Symbols: | Protein kinase superfamily protein
| chr4:11383541-11383955 FORWARD LENGTH=339
Length=339
Score = 394 bits (213), Expect = 2e-108
Identities = 283/317 (89%), Gaps = 4/317 (1%)
Strand=Plus/Plus
Query 2083 ATGTCTCCAGAATACGCAATGGACGGGATATTCTCAGTAAAATCGGATGTCTTCAGCTTT 2142
|||||||| |||||||||||||| ||||||||||| |||||||||||||| ||||||||
Sbjct 1 ATGTCTCCCGAATACGCAATGGAGGGGATATTCTCGGTAAAATCGGATGTTTTCAGCTTC 60
Query 2143 GGGGTATTGGTTCTTGAAATTGTCAGTGGAAAGAGGAACAGAGGATTCTACAACT-CGAA 2201
||||| ||||||||||| |||||||||||||||||||||||||||||| |||||| ||
Sbjct 61 GGGGTTTTGGTTCTTGAGATTGTCAGTGGAAAGAGGAACAGAGGATTCCACAACTCCG-G 119
Query 2202 CCAGGACAATAATCTTCTTAGCTACACGTGGGATCATTGGAAGGAAGGAAAATGGCTAGA 2261
||| |||||||||||||| ||||||||||||| ||||||| ||||||||| |||||||
Sbjct 120 CCAAGACAATAATCTTCTCGGCTACACGTGGGAGAATTGGAAAGAAGGAAAAGGGCTAGA 179
Query 2262 GATCGCCGATCCAATCATTGTAGGCACATCATCATC-ATCGTCAACGTTCCGACCACACG 2320
||||| |||| | || ||||||| | |||||||| || |||| ||||| |||||| |
Sbjct 180 GATCGTCGATTCGATAATTGTAGATTCCTCATCATCAAT-GTCATTGTTCCAACCACATG 238
Query 2321 AAGTCTTAAGATGCTTACAGATTGGTCTCTTATGTGTTCAAGAACGTGCAGAGGACAGAC 2380
|||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 239 AAGTCTTAAGATGCATACAGATTGGTCTTTTATGTGTTCAAGAACGTGCAGAGGACAGAC 298
Query 2381 CAAAGATGTCGTCGGTG 2397
|||||||||||||||||
Sbjct 299 CAAAGATGTCGTCGGTG 315
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 127022699676
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5