BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg890118
Length=1176
Score E
Sequences producing significant alignments: (Bits) Value
AT4G20460.1 | Symbols: | NAD(P)-binding Rossmann-fold superfam... 1890 0.0
AT5G44480.1 | Symbols: DUR | NAD(P)-binding Rossmann-fold super... 1120 0.0
> AT4G20460.1 | Symbols: | NAD(P)-binding Rossmann-fold superfamily
protein | chr4:11029736-11032677 REVERSE LENGTH=1685
Length=1685
Score = 1890 bits (1023), Expect = 0.0
Identities = 1127/1178 (96%), Gaps = 4/1178 (0%)
Strand=Plus/Plus
Query 1 ATGGAATACTTGGAACCCAAAAGGAAGAGCAATGTCATGGGCAAGCTTATCTTGGTAGTT 60
||||||||||| ||||| ||||||||||||||||| ||||||||| |||||||||| |||
Sbjct 479 ATGGAATACTTAGAACCTAAAAGGAAGAGCAATGTAATGGGCAAGATTATCTTGGTTGTT 538
Query 61 TCTCTTACTGCGCTATGCATTATTATGCTCAAGCATGCACCGAGTTTCACATCACCAACC 120
||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||||||
Sbjct 539 TCTCTTACTGCTTTATGCATTTTTATGCTCAAGCACGCACCGAGTTTCACATCACCAACC 598
Query 121 GCGTTTTCTCGCAGCGAGGAAGGCGTGACTCATGTGTTAGTCACTGGTGGCGCTGGATAT 180
||||| ||||| ||||||||||| |||||||||||||||||||||||||| |||||||||
Sbjct 599 GCGTTCTCTCGTAGCGAGGAAGGTGTGACTCATGTGTTAGTCACTGGTGGTGCTGGATAT 658
Query 181 ATCGGATCACATGCTGCATTGAGGCTGC-TAAAAGATTCATACCGTGTAACCATTCTGGA 239
||||||||||||||||| |||||||| | |||||||||||||||||||||||||| ||||
Sbjct 659 ATCGGATCACATGCTGCGTTGAGGCT-CTTAAAAGATTCATACCGTGTAACCATTGTGGA 717
Query 240 CAATCTTTCTCGCGGG-AATCTTGGCGCTGTCAAGGTTTTACAGGGATTGTTCCCAGAAG 298
|||||||||||| ||| |||||||| || |||||||||||||| |||||||||||||||
Sbjct 718 CAATCTTTCTCG-GGGAAATCTTGGTGCCGTCAAGGTTTTACAAGGATTGTTCCCAGAAC 776
Query 299 CCGGGAGGCTTCAATTTATTTATGCTGACTTAGGAGATGCCAAAGCTGTCGATAAAATCT 358
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 777 CCGGGAGGCTTCAATTTATTTATGCTGACTTAGGAGATGCCAAAGCTGTTGATAAAATCT 836
Query 359 TCTCAGAGAATGCGTTTGATGCTGTTATGCATTTTGCTGCGGTAGCATATGTTGGAGAGA 418
|||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 837 TCTCAGAGAACGCGTTTGATGCTGTTATGCATTTTGCTGCAGTAGCATATGTTGGAGAGA 896
Query 419 GCACTCTAGATCCTCTAAAGTATTACCACAACATTACATCAAACACATTAGTAGTTCTTG 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 897 GCACTCTAGATCCTCTAAAGTATTACCACAACATTACATCAAACACATTAGTAGTTCTTG 956
Query 479 AAGCTGTGGCTAGACATAAAGTAAAGAAGTTGATATATTCAAGCACATGTGCCACTTATG 538
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 957 AAGCTGTGGCTAGACATAAAGTGAAGAAGTTGATATATTCAAGCACATGTGCCACTTATG 1016
Query 539 GAGAACCTGACAAGATGCCTATTGTTGAAGTTACTCCACAGGTCCCGATTAACCCTTATG 598
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1017 GAGAACCTGACAAGATGCCTATTGTTGAAGTTACTCCACAGGTCCCCATTAACCCTTATG 1076
Query 599 GAAAAGCTAAGAAGATGGCTGAAGATATGATCCTGGATTTCTCTAAAAACTCTGACATGG 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1077 GAAAAGCTAAGAAGATGGCTGAAGATATGATCCTGGATTTCTCTAAAAACTCTGACATGG 1136
Query 659 CAGTCATGATCCTAAGATACTTTAATGTGATCGGTTCAGACCCAGAAGGTAGACTAGGAG 718
||||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||||
Sbjct 1137 CAGTCATGATCCTAAGATACTTTAACGTGATAGGTTCAGATCCAGAAGGTAGACTAGGAG 1196
Query 719 AAGCTCCAAAACCAGAGCTACGCGAACATGGGCGAATTTCAGGTGCTTGTTTCGATGCAG 778
|||||||||| || |||||||| ||||| || || ||||| ||||| |||||||||||||
Sbjct 1197 AAGCTCCAAAGCCCGAGCTACGTGAACACGGACGGATTTCGGGTGCCTGTTTCGATGCAG 1256
Query 779 CTCGTGGCGTGATTCCAGGCCTGCAGGTCAAAGGAACAGACTACAAAACAGGAGATGGAA 838
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1257 CTCGTGGCGTGATTCCAGGCCTTCAGGTCAAAGGAACAGACTACAAAACAGGAGATGGAA 1316
Query 839 CTTGTGTTCGTGACTACATAGACGTTACTGACCTTGTAGATGCTCACGTGAAGGCTCTCG 898
|||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||
Sbjct 1317 CTTGTGTTCGTGACTACATAGATGTTACTGACCTTGTAGATGCTCACGTAAAAGCTCTCG 1376
Query 899 AGAAAGCTAAGCCTAGAAATGTCGGAATCTACAATGTAGGTACCGGAAAAGGAAGATCGG 958
|||||||||||||||||||||| ||||| |||||||||||||| ||||||||||||||||
Sbjct 1377 AGAAAGCTAAGCCTAGAAATGTGGGAATATACAATGTAGGTACAGGAAAAGGAAGATCGG 1436
Query 959 TGAAGGAGTTTGTGGAAGCATGTAAGAAAGCAACAGGAGTAGATATCAAAGTAGATTTCT 1018
|||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| |
Sbjct 1437 TGAAAGAGTTTGTGGAAGCATGTAAGAAAGCGACAGGAGTAGATATCAAAGTAGATTTTT 1496
Query 1019 TGCCTCGAAGACCTGGAGATTACGCAGAGGTTTACAGTGATCCAGCAAAGATTCTGAGAG 1078
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1497 TGCCTCGAAGACCTGGAGATTACGCAGAGGTTTACAGTGATCCAGCAAAGATTCTGAGAG 1556
Query 1079 ATCTGAATTGGTCTGCTCGTTACACTAATCTTCAAGAAAGTCTTGAAGTTGCTTGGAAGT 1138
|||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1557 ATCTTAATTGGTCTGCTCGTTACACTAATCTTCAAGAAAGTCTTGAGGTTGCTTGGAAGT 1616
Query 1139 GGCAAAAGACTCATCCCCATGGATATGCTTCTTCTTAA 1176
||||||||||||||||||||||||||||||||||||||
Sbjct 1617 GGCAAAAGACTCATCCCCATGGATATGCTTCTTCTTAA 1654
> AT5G44480.1 | Symbols: DUR | NAD(P)-binding Rossmann-fold superfamily
protein | chr5:17921515-17923643 FORWARD LENGTH=1311
Length=1311
Score = 1120 bits (606), Expect = 0.0
Identities = 997/1187 (84%), Gaps = 22/1187 (2%)
Strand=Plus/Plus
Query 1 ATGGAATACTTGGAACCCAAAAGGAAGAGCAATGTCA-TGGGCAAGCTTATCTTGGTAG- 58
||||| | ||| |||||||||| |||| |||| ||| | || |||||| |||| ||||
Sbjct 136 ATGGATTGCTTAGAACCCAAAACAAAGAACAATCTCACT-GGAAAGCTTCTCTTAGTAGC 194
Query 59 TT-TCTCTTACTGCGCTATG-CATTATTATGCTCAAG-C-ATGCACCGAGTTTCACATCA 114
|| |||||| | || | ||||||| || || || | || | | |||||||||||
Sbjct 195 TTCACTCTTAAT--TTTA-GCCATTATTGTGATC-AGTCAAT-CTTCAAGTTTCACATCT 249
Query 115 CCAACCGCGTTTTCTCGCAGCGAGGAAGGCGTGACTCATGTGTTAGTCACTGGTGGCGCT 174
|||| ||||||||||| || |||||||| |||||||||||||||||||||||||| |||
Sbjct 250 CCAAGCGCGTTTTCTCAAAGAGAGGAAGGAGTGACTCATGTGTTAGTCACTGGTGGTGCT 309
Query 175 GGATATATCGGATCACATGCTGCATTGAGGCTGCTAAAAGATTCATACCGTGTAACCATT 234
|| |||||||| |||||||| || || || || || | |||||||||||| |||||||||
Sbjct 310 GGTTATATCGGGTCACATGCGGCTTTAAGACTTCTTAGAGATTCATACCGCGTAACCATT 369
Query 235 CTGGACAATCTTTCTCGCGGGAATCTTGGCGCTGTCAAGGTTTTACAGGGATTGTTCCCA 294
||||||||||||| || || |||||||| || || ||| ||||||| ||| |||||
Sbjct 370 GTGGACAATCTTTCGCGTGGAAATCTTGGTGCGGTTAAGACTTTACAGCAATTATTCCC- 428
Query 295 GAAG-CCGGGAGGCTTCAATTTATTTATGCTGACTTAGGAGATGCCAAAGCTGTCGATAA 353
| || | || || ||||| || ||||||||||||||||||||| || ||| ||||| ||
Sbjct 429 GCAGACAGGAAGACTTCAGTTCATTTATGCTGACTTAGGAGATCCCTTAGCGGTCGAGAA 488
Query 354 AATCTTCTCAGAGAATGCGTTTGATGCTGTTATGCATTTTGCTGCGGTAGCATATGTTGG 413
||||||||| |||||||| ||||| ||||| |||||||||||||||||||| ||||| ||
Sbjct 489 AATCTTCTCGGAGAATGCTTTTGACGCTGTAATGCATTTTGCTGCGGTAGCTTATGTCGG 548
Query 414 AGAGAGCACTCTAGATCCTCTAAAGTATTACCACAACATTACATCAAACACATTAGTAGT 473
||| |||||||| |||||||||| |||||||| ||||||||||||||||| |||| |||
Sbjct 549 AGAAAGCACTCTTTATCCTCTAAAATATTACCATAACATTACATCAAACACGTTAGGAGT 608
Query 474 TCTTGAAGCTGTGGCTAGACATAAAGTAAAGAAGTTGATATATTCAAGCACATGTGCCAC 533
|||||||||| |||||||||||||||||||||| |||||||||| ||||| ||||| ||
Sbjct 609 TCTTGAAGCTATGGCTAGACATAAAGTAAAGAAACTGATATATTCTAGCACTTGTGCTAC 668
Query 534 TTATGGAGAACCTGACAAGATGCCTATTGTTGAAGTTACTCCACAGGTCCCGATTAACCC 593
|||||||| ||||| || ||||| ||| ||||| ||||||||||| |||||||| ||
Sbjct 669 ATATGGAGAGCCTGAAAAAATGCCGATTACTGAAGACACTCCACAGGTACCGATTAATCC 728
Query 594 TTATGGAAAAGCTAAGAAGATGGCTGAAGATATGATCCTGGATTTCTCTAAA-AACTCTG 652
|| ||||||||||| |||||||| || ||||||||| |||||||||| ||| |||||||
Sbjct 729 ATACGGAAAAGCTAAAAAGATGGCAGAGGATATGATCTTGGATTTCTC-AAAGAACTCTG 787
Query 653 ACATGGCAGTCATGATCCTAAGATACTTTAATGTGATCGGTTCAGACCCAGAAGGTAGAC 712
||||||| || |||||| |||||||||| |||||||| |||||||| |||| |||||||
Sbjct 788 ACATGGCGGTTATGATCTTAAGATACTTCAATGTGATTGGTTCAGATCCAGGAGGTAGAT 847
Query 713 TAGGAGAAGCTCCAAAACCAGAGCTACGCGAACATGGGCGAATTTCAGGTGCTTGTTTCG 772
|||||||||| |||| ||| || || || || || || | ||||| |||||||||||||
Sbjct 848 TAGGAGAAGCGCCAAGACCCGAACTTCGTGAGCAAGGAAGGATTTCTGGTGCTTGTTTCG 907
Query 773 ATGCAGCTCGTGGCGTGATTCCAGGCCTGCAGGTCAAAGGAACAGACTACAAAACA-GGA 831
||||||||||||| | ||||| || || || || |||||||| || ||||||||| |
Sbjct 908 ATGCAGCTCGTGGTTTCATTCCCGGACTACAAGTGAAAGGAACGGATTACAAAACATCG- 966
Query 832 GATGGAACTTGTGTTCGTGACTACATAGACGTTACTGACCTTGTAGATGCTCACGTGAAG 891
|| || ||||| || | ||||| ||||| ||||||||||| || |||||||||||||||
Sbjct 967 GACGGTACTTGCATTAGAGACTATATAGATGTTACTGACCTCGTGGATGCTCACGTGAAG 1026
Query 892 GCTCTCGAGAAAGCTAAGCCTAGAAATGTCGGAATCTACAATGTAGGTACCGGAAAAGGA 951
||||||||||||||| ||||| |||| ||||| ||||||||||| || |||||||||||
Sbjct 1027 GCTCTCGAGAAAGCTCAGCCTCGAAAAGTCGGTATCTACAATGTTGGAACCGGAAAAGGG 1086
Query 952 AGATCGGTGAAGGAGTTTGTGGAAGCATGTAAGAAAGCAACAGGAGTAGATATCAAAGTA 1011
|||||||| || || || || || ||||||||||| || |||||||| || |||||||||
Sbjct 1087 AGATCGGTTAAAGAATTCGTTGAGGCATGTAAGAAGGCGACAGGAGTTGAGATCAAAGTA 1146
Query 1012 GATTTCTTGCCTCGAAGACCTGGAGATTACGCAGAGGTTTACAGTGATCCAGCAAAGATT 1071
||||||||||||||| |||| |||||||||||||||||||||||||||||| ||||||||
Sbjct 1147 GATTTCTTGCCTCGACGACCGGGAGATTACGCAGAGGTTTACAGTGATCCAACAAAGATT 1206
Query 1072 CTGAGAGATCTGAATTGGTCTGCTCG-TTACACTAATCTTCAAGAAAGTCTTGAAGTTGC 1130
||| |||| |||||||| ||||||| || ||||||||||||||| |||||| |||||||
Sbjct 1207 TTGAAAGATTTGAATTGGACTGCTCGATT-CACTAATCTTCAAGATAGTCTTCAAGTTGC 1265
Query 1131 TTGGA-AGTGGCAAAAGACTCATCCCCATGGATATGCTTCTTCTTAA 1176
||||| | |||||||| | |||||| ||||||||| ||||| ||||
Sbjct 1266 TTGGAGA-TGGCAAAAAATTCATCCTCATGGATATAATTCTTATTAA 1311
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 57730626750
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5