BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg890123
Length=1218
Score E
Sequences producing significant alignments: (Bits) Value
AT4G20430.1 | Symbols: | Subtilase family protein | chr4:11017... 1847 0.0
AT5G44530.1 | Symbols: | Subtilase family protein | chr5:17937... 795 0.0
> AT4G20430.1 | Symbols: | Subtilase family protein | chr4:11017656-11021280
REVERSE LENGTH=2746
Length=2746
Score = 1847 bits (1000), Expect = 0.0
Identities = 1134/1199 (95%), Gaps = 8/1199 (1%)
Strand=Plus/Plus
Query 24 CAGCTTCGATAAAGATATCATCCGTGGGAATCTTCTGATATGTAGCTACTCTATCCGTTT 83
|||||||||||||||| | |||||||||||||| ||||||||||||||||||||||||||
Sbjct 1552 CAGCTTCGATAAAGATGTTATCCGTGGGAATCTACTGATATGTAGCTACTCTATCCGTTT 1611
Query 84 CGTGCTCGGACTTTCCACTATTAAACAAGCTTTAGCTGTTACCAAGAATCTATCTGCAAA 143
||| ||||| |||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1612 CGTCCTCGGGCTTTCCACTATTAAACAAGCTTTAGCTGTTGCCAAGAATCTATCTGCAAA 1671
Query 144 GGGTGTTGTGTTCTACATGGACCCTTATGTCCTTGGTTTTCAGATTAACCCTACACCAAT 203
|||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| ||
Sbjct 1672 GGGTGTTGTGTTCTACATGGACCCTTATGTTCTTGGTTTTCAGATTAATCCTACACCGAT 1731
Query 204 GGACATGCCCGGCATCATAATTCCATCCTCAGAAGATTCCAAGGTTTTACTCAAGTACTA 263
|||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1732 GGACATGCCCGGGATCATAATTCCATCCGCAGAAGATTCCAAGGTTTTACTCAAGTACTA 1791
Query 264 TAACTCTTCTCTTGTAAGAGATGGAACCACCAAAGAGATTGTTAGATTTGGGGCAGTTGC 323
||||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||
Sbjct 1792 TAACTCTTCTCTTGTAAGAGATGGAACAACCAAGGAGATTGTTAGATTTGGAGCAGTTGC 1851
Query 324 GGCCATTGCAGGTGGACAAAATGCTAACTTCAGTAACAGAGCTCCCAAGATAATGTACTA 383
|||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct 1852 AGCCATTGCAGGTGGACAAAATGCTAACTTCAGTAACAGAGCTCCTAAGATTATGTACTA 1911
Query 384 CTCAGCAAGAGGACCTGATCCAGAAGACAGCCTCTTTAACGACGCCGACATTTTGAAACC 443
|||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct 1912 CTCAGCAAGAGGACCTGATCCACAAGACAGCCTTTTTAACGACGCCGACATTTTGAAACC 1971
Query 444 AAATCTTGTAGCTCCTGGAAATTCCATTTGGGGTGCTTGGAGTTCCGCTGCCACTGAATC 503
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1972 AAATCTTGTAGCTCCTGGAAATTCCATTTGGGGCGCTTGGAGTTCCGCTGCCACTGAATC 2031
Query 504 CACTGAGTTTGAAGGAGAGAGTTTCGCGATGATGTCTGGTACGAGTATGGCTGCTCCTCA 563
|||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct 2032 CACTGAGTTTGAAGGAGAAAGTTTTGCGATGATGTCTGGTACGAGTATGGCTGCTCCTCA 2091
Query 564 TGTAGCTGGTGTGGCTGCATTGGTCAAGCAGAAATTCAGAAAATTTAGTCCTTCATCTAT 623
|||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||
Sbjct 2092 TGTAGCTGGTGTGGCTGCATTGGTCAAGCAGAAATTCAGAAAGTTTAGTCCTTCAGCTAT 2151
Query 624 TGCATCTGCACTGTCAACAACCTCTGTTCTTTTTGACAATAAAGGTGAGGCGATAATGGC 683
|||||||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct 2152 TGCATCTGCACTTTCAACAACCTCTGTTCTATTTGACAATAAAGGCGAGGCGATAATGGC 2211
Query 684 TCAACGTGCTTATGCTAATCCTGATCAAACCCTATCTCCTGCAACCCCATTTGATATGGG 743
||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||
Sbjct 2212 TCAACGTGCTTATGCTAATCCTGATCAAACCATATCTCCTGCTACCCCATTTGATATGGG 2271
Query 744 GAATGGCTTTGTGAATGCAACCGCAGCTTTGGATCCTGGCCTAATCTTTGATACTAGTTT 803
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2272 GAATGGCTTTGTGAATGCAACCGCAGCTTTGGATCCTGGCCTAATCTTTGATACTAGTTT 2331
Query 804 TGAAGACCATATGTCATTTCTTTGTGGGATAAATGGATCAGCTCCAGTGGTATTCAACTA 863
||||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||
Sbjct 2332 TGAAGACTATATGTCATTTCTTTGTGGCATCAATGGATCAGCTCCAGTGGTATTCAACTA 2391
Query 864 CACTGGCA-AGAATTGTCTT-CTTAGCAATGCAACAATCAGCGGATCTGACCTCAATTTG 921
||| |||| | ||||| ||| | | ||||||||||||||||||||||||||| ||||||
Sbjct 2392 CACCGGCACA-AATTG-CTTGCGGAACAATGCAACAATCAGCGGATCTGACCTTAATTTG 2449
Query 922 CCATCCATCACTGTCTC-AAGGCTTAACAACACTCGAACTGTCCAAAGACTATTGACAAA 980
|||||||||||||| || ||| ||||||||||||||||| |||||||||||| |||||||
Sbjct 2450 CCATCCATCACTGTATCGAAG-CTTAACAACACTCGAACGGTCCAAAGACTAATGACAAA 2508
Query 981 CATTGCTGGAAATGAGACCTATACTGTCAGTTTGATTCCTCCTTTTGATGTTTTGGTGAA 1040
||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||
Sbjct 2509 CATTGCTGGAAATGAGACCTATACTGTCAGTTTGATTACTCCTTTTGATGTTTTGATAAA 2568
Query 1041 GGTATCTCCTACTCAATTCTCTATAGCCAGTGGAGAGACAAAGCTACTTAGTGTAATCCT 1100
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2569 TGTATCTCCTACTCAATTCTCTATAGCCAGTGGAGAGACAAAGCTACTTAGTGTAATCCT 2628
Query 1101 CACAGCAAAGAAGAACAGCTCTATTGCTAGTTTTGG-GAGAGTCAAGCTTTTTGGAACCG 1159
||||||||||| ||||||||||||| |||||||||| | || ||||||| | |||| ||
Sbjct 2629 CACAGCAAAGAGGAACAGCTCTATTTCTAGTTTTGGAGGGA-TCAAGCTGCTAGGAAACG 2687
Query 1160 CAGGACATGTTGTTCATATTCCGATGTCTGTCACAGTGAAAATCGCCTCGAACCAATGA 1218
| ||||| |||||| ||||||| |||||||||||||||||||||||||||| ||||||
Sbjct 2688 CGGGACACATTGTTCGTATTCCGGTGTCTGTCACAGTGAAAATCGCCTCGAAACAATGA 2746
> AT5G44530.1 | Symbols: | Subtilase family protein | chr5:17937689-17941292
FORWARD LENGTH=2864
Length=2864
Score = 795 bits (430), Expect = 0.0
Identities = 940/1184 (79%), Gaps = 44/1184 (4%)
Strand=Plus/Plus
Query 49 GGGAATCTTCTGATATGTAGCTACTCTATC-CGTTTCGTGCTCGGACTTTCCACTATTAA 107
||||| ||| ||||||||||||||||| | ||||| || ||||| ||||| ||||| ||
Sbjct 1599 GGGAAACTTTTGATATGTAGCTACTCT-GCTCGTTTTGTTCTCGGGCTTTCGACTATAAA 1657
Query 108 ACAAGCTTTAGCTGTTACCAAGAATCTATCTGCAAAGGGTGTTG-TGTTCTACATGGACC 166
||||||||||| |||| ||||||||||||| || | |||| || | ||||| || ||||
Sbjct 1658 ACAAGCTTTAGATGTTGCCAAGAATCTATCCGCGACTGGTG-TGATATTCTATATAGACC 1716
Query 167 CTTATGTCCTTGGTTTTCAGATTAACCCTACACCAATGGACATGCCCGGCATCATAATTC 226
| ||||| ||||||||| |||| || || ||||| ||||| |||||||| ||||||||||
Sbjct 1717 CGTATGTTCTTGGTTTTGAGATCAATCCAACACCGATGGATATGCCCGGGATCATAATTC 1776
Query 227 CATCCT-CAGAAGATTCCAAGGTTTTACTCAAGTACTATAACTCTTCTCTTGTAAGAGAT 285
||| || ||||||||||||| ||||||||||||||||||||||||| || |||||||
Sbjct 1777 CAT-CTGTAGAAGATTCCAAGACTTTACTCAAGTACTATAACTCTTCTATTCAAAGAGAT 1835
Query 286 GGAACCACCAAAGAGATTGTTAGATTTGGGGCAGTTGCGGCCATTGCAGGTGGACAAAAT 345
| |||||| ||||| |||||||| ||||| || ||||| ||||| | ||| || ||||
Sbjct 1836 GTAACCACTAAAGAAATTGTTAGTTTTGGAGCGGTTGCAGCCATAGAAGGCGGTTTAAAT 1895
Query 346 GCTAACTTCAGTAACAGAGCTCCCAAGATAATGTACTACTCAGCAAGAGGACCTGATCCA 405
|||||||| |||||||||||||| ||| ||||||| |||||||||||||||||||||||
Sbjct 1896 GCTAACTTTAGTAACAGAGCTCCTAAGGTAATGTATTACTCAGCAAGAGGACCTGATCCT 1955
Query 406 GAAGACAGCCTC-TTTAACGACGCCGACATTTTGAAACCAAATCTTGTAGCTCCTGGAAA 464
||||||| ||| ||||||||||| ||| | || ||||| || || ||||| ||||||||
Sbjct 1956 GAAGACA-ACTCTTTTAACGACGCAGACGTATTAAAACCGAACCTCGTAGCACCTGGAAA 2014
Query 465 TTCCATTTGGGGTGCTTGGAGTTCCGCTGCCACTGAATCCACTGAGTTTGAAGGAGAG-A 523
|| |||||||||||||||||||| ||| | || || || || ||||||||||| ||| |
Sbjct 2015 CTCTATTTGGGGTGCTTGGAGTTCTGCTTCAACGGATTCTACCGAGTTTGAAGGTGAGAA 2074
Query 524 GTTTCGCGATGATGTCTGGTACGAGTATGGCTGCTCCTCATGTAGCTGGTGTGGCTGCAT 583
||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||
Sbjct 2075 ATTT-GCGATGATGTCCGGTACAAGTATGGCTGCTCCTCATGTAGCTGGTGTGGCTGCAT 2133
Query 584 TGGTCAAGCAGAAATTCAGAAA-A-TTTAGTCCTTCATCTAT-TGCATCTGCACTGTCAA 640
| |||| || || || | | | |||| ||||||| | || | |||| || || ||||
Sbjct 2134 TAATCAAACA-AAGTT-ATCCACAGTTTACTCCTTCAACAATCT-CATCCGCGCTTTCAA 2190
Query 641 CAACCTCTGTTCTTTTTGACAATAAAGGTGAGGC-GATAATGGCTCAACGTGCTTATGCT 699
|||| || | || ||| |||||||| || | |||||||||||| || ||||| |
Sbjct 2191 CAACGGCTCTCCTAAATGATAATAAAGGC-AGTCCGATAATGGCTCAGCGAACTTATTCC 2249
Query 700 AATCCTGATCAAA-CC-CTATCTCCTGCAACCCCATTTGATATGGGGAATGGCTTTGTGA 757
||||| ||||||| || |||| || ||||| || | ||||||||||| || ||||| |
Sbjct 2250 AATCCCGATCAAAGCCTCTATA-CC-GCAACACCGTCTGATATGGGGAGCGGTTTTGTTA 2307
Query 758 ATGCAACCGCAGCTTTGGATCCTGGCCTAATCTTTGATACTAGTTTTGAAGACCATATGT 817
| ||||| |||||||| || ||||| ||| | |||||||| ||||||||||| |||| |
Sbjct 2308 ACGCAACGGCAGCTTTAGACCCTGGTCTAGTTTTTGATACAAGTTTTGAAGATTATATAT 2367
Query 818 CATTTCTTTGTGGGATAAATGGATCAGCTCCAGTGGTATTCAACTACACTGGCAAGAAT- 876
|||||||||||||||| || || || | | | ||||||||||||||||| || |
Sbjct 2368 CATTTCTTTGTGGGATCAACGGCTCGGATACGGTGGTATTCAACTACACCGG-ATTCCGC 2426
Query 877 TGTCTT-CTTAGCAATGCAACAATCAGCGGATCTGACCTCAATTTGCCATCCATCACTGT 935
|||| || | ||| || || |||| || | |||||||||||||||||| || || ||
Sbjct 2427 TGTCCCGCTAA-CAACACACCAGTCAGTGGTTTTGACCTCAATTTGCCATCAATTACAGT 2485
Query 936 CTCAAGGCTTAACAACACTCGAACTGTCCAAAGA-CTATTGACAAACATTGCTGGAAATG 994
|| | |||| ||| | |||| |||||||| | || || |||||| || || ||||
Sbjct 2486 ATCGACACTTAGTGGCACACAAACTTTCCAAAGATCGAT-GAGAAACATAGCCGGCAATG 2544
Query 995 AGACCTATACTGTCAGTTTGATTCCTCCTTTTGATGTTTTGGTGAAGGTATCTCCTACTC 1054
|||| || | ||| ||| || |||||||| || ||||| |||| ||||| |||||||
Sbjct 2545 AGACATACAATGTTGGTTGGAGTCCTCCTTATGGTGTTTCAATGAAAGTATCACCTACTC 2604
Query 1055 AATTCTCTATAGCCAGTGG-AGAGA--CAAAGCTACTTAGTGTAATCCTCACAGCAA-AG 1110
|||| ||||| || | ||| ||| | ||| | ||||||| |||| |||||| | | |
Sbjct 2605 AATTTTCTATTGCTA-TGGGAGAAAATCAA-G-TACTTAGCGTAACCCTCACGGTGACA- 2660
Query 1111 AAGAACAGCTCTA-TTGCTAGTTTTGGGAGAGTCAAGCTT-TTTGGAACCGCAGGACATG 1168
|||||||| || | || |||||||||| ||| || | || ||||||| |||||||
Sbjct 2661 AAGAACAGTTCCAGTT-CTAGTTTTGGCAGAATCG-GATTGTTTGGAAATACAGGACACA 2718
Query 1169 TTGTTCATATTCCGATGT--CTGTCACAGTGAAAATCGCCTCGA 1210
||||| ||||||| ||| |||||| || ||||||||| ||||
Sbjct 2719 TTGTTAATATTCC--TGTAACTGTCATAGCGAAAATCGCTTCGA 2760
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 59839049640
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5