BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg890208
Length=1743
Score E
Sequences producing significant alignments: (Bits) Value
AT4G19660.1 | Symbols: NPR4, ATNPR4 | NPR1-like protein 4 | chr... 2667 0.0
AT5G45110.1 | Symbols: NPR3, ATNPR3 | NPR1-like protein 3 | chr... 998 0.0
> AT4G19660.1 | Symbols: NPR4, ATNPR4 | NPR1-like protein 4 | chr4:10696266-10698243
REVERSE LENGTH=1725
Length=1725
Score = 2667 bits (1444), Expect = 0.0
Identities = 1645/1741 (94%), Gaps = 18/1741 (1%)
Strand=Plus/Plus
Query 1 ATGGCTGCAACTGCAATGGAGCCATCTTCATCTATAAGTTTCACATCTTCTCACTTATCA 60
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGCTGCAACTGCAATAGAGCCATCTTCATCTATAAGTTTCACATCTTCTCACTTATCA 60
Query 61 AATCCTTCTCCTGTTGTTACTACTTATCAGTCAGCTGCTTATCTGGAAGAGCTCAGCTCT 120
|| |||||||||||||||||||||||||| ||||||||| |||| |||||||||||||||
Sbjct 61 AACCCTTCTCCTGTTGTTACTACTTATCACTCAGCTGCTAATCTTGAAGAGCTCAGCTCT 120
Query 121 AACTTGGAGCAGCTTCTCACTAACCCAGATTGCGATTATACCGACGCAGAGATCATTATT 180
||||||||||||||||||||||| |||||||||||||| || |||||||||||||| |||
Sbjct 121 AACTTGGAGCAGCTTCTCACTAATCCAGATTGCGATTACACTGACGCAGAGATCATCATT 180
Query 181 GAAGAAGAGGCTAACCCTGTGAGTGTTCATAGATGTGTTTTAGCTGCAAGGAGCAAGTTT 240
|||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 181 GAAGAAGAAGCTAACCCTGTGAGTGTTCATAGATGTGTTTTAGCTGCTAGGAGCAAGTTT 240
Query 241 TTTCTTGATCTGTTCAAGAAAGATAAAGATAGTAGTGCAAAGAGTGAGAAGAAACCAAAG 300
|||||||||||||| ||||||||||||| | |||| |||||||||||||| |||
Sbjct 241 TTTCTTGATCTGTTTAAGAAAGATAAAG--A-TAGT------AGTGAGAAGAAACCTAAG 291
Query 301 TATCAAATGAAAGAGTTGTTACCTTATGGAAATGTGGGACGCGAGGCCTTCCTGCATTTC 360
|||||||||||||| || ||||| ||||||||||||||||| ||||| || |||||||||
Sbjct 292 TATCAAATGAAAGATTTATTACCATATGGAAATGTGGGACGTGAGGCATTTCTGCATTTC 351
Query 361 TTGAACTATATCTACACTGGGAGGTTAAAGCCTTTTCCTATCGAGGTTTCGACTTGTGTT 420
|||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 352 TTGAGCTATATCTACACTGGGAGGTTAAAGCCTTTTCCTATCGAGGTTTCAACTTGTGTT 411
Query 421 GATTCAGTTTGTGCTCATGATTCTTGTAAACCGGCCATTGATTTTGCTGTTGAGTTGATG 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 412 GATTCAGTTTGTGCTCATGATTCTTGTAAACCGGCCATTGATTTTGCTGTTGAGTTGATG 471
Query 481 TATGCTTCATTTGTGTTCCAAATCCCGGACCTGGTTTCATCATTTCAGCGGAAGCTTTGT 540
||||||||||||||||||||||||||||| || ||||| |||||||||||||||||| ||
Sbjct 472 TATGCTTCATTTGTGTTCCAAATCCCGGATCTTGTTTCGTCATTTCAGCGGAAGCTTCGT 531
Query 541 AGCTATGTTGGGAAGTCACTAGTTGAGAATGTTCTTCCGATCCTCTTAGTTGCGTTTCAT 600
| |||||||| |||||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct 532 AACTATGTTGAGAAGTCACTAGTAGAGAATGTTCTTCCTATCCTCTTAGTTGCGTTTCAT 591
Query 601 TGTGATTTGACGCAGCTTCTTGATCAATGCATAGAGAGAGTGGCTAGATCAGATTTAGAC 660
||||||||||| |||||||||||||||||||| ||||||||||| |||||||| ||||||
Sbjct 592 TGTGATTTGACACAGCTTCTTGATCAATGCATTGAGAGAGTGGCGAGATCAGACTTAGAC 651
Query 661 AGATTCTGCATTGAAAAGGAGCTTCCTTTCGAAGTATCGGAAAAAATCAAACAGCTTCGA 720
|||||||| || ||||||||||||||||| ||||||| ||||||||||||||||||||||
Sbjct 652 AGATTCTGTATCGAAAAGGAGCTTCCTTTAGAAGTATTGGAAAAAATCAAACAGCTTCGA 711
Query 721 GTTAAGTCGGTGAACATACCTGAGGAGGTGGATAAATCGCTAGAGAGAACCGGGAAAGTA 780
|||||||||||||||||||| |||| || |||||||||| |||||||||| |||||||||
Sbjct 712 GTTAAGTCGGTGAACATACCCGAGGTGGAGGATAAATCGATAGAGAGAACAGGGAAAGTA 771
Query 781 CTCAAGGCATTGGATTCAGATGATGTGGAACTCGTGAAGCTTCTTTTGACTGAGTCAGAT 840
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 772 CTCAAGGCATTGGATTCAGATGATGTAGAACTCGTGAAGCTTCTTTTGACTGAGTCAGAT 831
Query 841 ATAACTCTAGACCAAGCCAATGGTCTGCATTATGCAGTGGCTTACAGTGATCCGAAAGTT 900
|||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct 832 ATAACTCTAGACCAAGCCAATGGTCTACATTATGCAGTGGCATACAGTGATCCGAAAGTT 891
Query 901 GTGACCCAGGTTCTTGATCTAAATATGGCTGATGTTAATTTCAGAAATTCCAGAGGGTAT 960
||||| ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||
Sbjct 892 GTGACACAGGTTCTTGATCTAGATATGGCTGATGTTAATTTCAGAAATTCCAGGGGGTAT 951
Query 961 ACAGTTCTTCATATTGCTGCTATGCGTAGAGAGCCAACAATTATTATACCACTTATTCAA 1020
|| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 952 ACGGTTCTTCATATTGCTGCTATGCGTAGAGAGCCAACAATTATCATACCACTTATTCAA 1011
Query 1021 AAAGGAGCTCATGCTTCGGATTTCACGTTTGATGGACGCAGTGCGGTTAATATATGTAGG 1080
||||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1012 AAAGGAGCTAATGCTTCAGATTTCACGTTTGATGGACGCAGTGCGGTAAATATATGTAGG 1071
Query 1081 AGACTCACTAGGCCAAAAGATTATCATAGCAAAACCTCAAGGAAAGAACCTAGTAAAGAC 1140
|||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| ||
Sbjct 1072 AGACTCACTAGGCCGAAAGATTATCATACCAAAACCTCAAGGAAAGAACCTAGTAAATAC 1131
Query 1141 CGCTTATGCATCGATATCTTGGAAAGGGAAATTAGAAGGAATCCATTGGTTAGTGGGGAT 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1132 CGCTTATGCATCGATATCTTGGAAAGGGAAATTAGAAGGAATCCATTGGTTAGTGGGGAT 1191
Query 1201 ACACCCACTTGTTCCCATTCGATGCCCGAGGATCTCCAAATGAGGTTGTTATACTTAGAA 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1192 ACACCCACTTGTTCCCATTCGATGCCCGAGGATCTCCAAATGAGGTTGTTATACTTAGAA 1251
Query 1261 AAGCGAGTGGGACTTGCTCAGTTGTTCTTCCCAGCAGAAGCTAATGTGGCCATGGACGTT 1320
||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct 1252 AAGCGAGTGGGACTTGCTCAGTTGTTCTTCCCAGCAGAAGCCAATGTGGCTATGGACGTT 1311
Query 1321 GCTAATGTTGAAGGGACAAGCGAGTGCACAGGTCTTCTAACTCCACCTCCATCAAATGGT 1380
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1312 GCTAATGTTGAAGGGACAAGCGAGTGCACAGGTCTTCTAACTCCACCTCCATCAAATGAT 1371
Query 1381 ACAACCGGAAACTTGGGTAAAGTCGATTTAAATGAAACGCCTTATGTGCAAACGAAAAGA 1440
||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1372 ACAACTGAAAACTTGGGTAAAGTCGATTTAAATGAAACGCCTTATGTGCAAACGAAAAGA 1431
Query 1441 ATGCTTACACGTATGGAAGCCCTCATGAAAACAGTTGAGACAGGTCGGAGGTATTTCCCA 1500
||||||||||||||| |||||||||||||||||||||||||||||||||| || ||||||
Sbjct 1432 ATGCTTACACGTATGAAAGCCCTCATGAAAACAGTTGAGACAGGTCGGAGATACTTCCCA 1491
Query 1501 TCTTGTTCTGAGGTTCTTGATAGGCACATGGATGAGTATATGGACGAAGACATCCCTGAT 1560
||||||| ||||||||| |||| | |||||||| |||||||||||||||| |||||||||
Sbjct 1492 TCTTGTTATGAGGTTCTGGATAAGTACATGGATCAGTATATGGACGAAGAAATCCCTGAT 1551
Query 1561 ATGTCACATCCCGAAAAAGGCACTGTGAAAGAGAGAAGACAGAAGAGAATGAGATATAAC 1620
||||| ||||||| |||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1552 ATGTCGTATCCCGAGAAAGGCACTGTGAAAGAGAGAAGACAGAAGAGGATGAGATATAAC 1611
Query 1621 GAGCTGAAGAACGACGTTAAGAAAGCGTATAGCAAAGACAAAGAGGCCAAGATCGCGCGG 1680
|||||||||||||||||||| ||||| |||||||||||||||| ||||||||
Sbjct 1612 GAGCTGAAGAACGACGTTAAAAAAGCATATAGCAAAGACAAAG---------TCGCGCGG 1662
Query 1681 TCTTGTCTTTCTTCTTCATCACCAGCTTCTTCTCATAGAGAAGCCTTAGAGAACCCAACA 1740
|||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||
Sbjct 1663 TCTTGTCTTTCTTCTTCATCACCAGCTTCTTCTCTTAGAGAAGCCTTAGAGAATCCAACA 1722
Query 1741 T 1741
|
Sbjct 1723 T 1723
> AT5G45110.1 | Symbols: NPR3, ATNPR3 | NPR1-like protein 3 | chr5:18228910-18231522
FORWARD LENGTH=2358
Length=2358
Score = 998 bits (540), Expect = 0.0
Identities = 1297/1650 (79%), Gaps = 102/1650 (6%)
Strand=Plus/Plus
Query 112 CTCAGCTCTAA-CTTGGAGCAGCTTCTCACTAACCCAGATTGCGATTATACCGACGCAGA 170
|||||||| || ||| ||||||||||| | ||| ||||||| ||||| | || |||||
Sbjct 539 CTCAGCTCCAATCTT-GAGCAGCTTCTTAGTAATTCAGATTGTGATTACAGTGATGCAGA 597
Query 171 GATCATTATTGAAGAAGAGGCTAACCCTG-TGAGTGTTCATAGATGTGTTTTAGCTGCAA 229
||||||| |||| | | | | || | || ||||||||||||| ||||||||||||
Sbjct 598 GATCATTGTTGATG--G-TG-T--TCCAGTTG-GTGTTCATAGATGCATTTTAGCTGCAA 650
Query 230 GGAGCAAGTTTTTTCTTGATCTGTTCAAGAAAGATAAAGATAGTAGTGC-AAAGAGTGAG 288
| || |||||||| | ||| |||| |||||||| ||||| | | | | ||| | | |
Sbjct 651 GAAGTAAGTTTTTCCAAGATTTGTTTAAGAAAGA-AAAGA-A-AATTTCGAAA-ACT--G 704
Query 289 AAGAAACCAAAGTATCAAATGAAAGAGTTGTTACCTTATGGAAATGTGGGACGCGAGGCC 348
|||||||||||||||| ||| |||| |||||||||||||| ||| | | || ||
Sbjct 705 -AGAAACCAAAGTATCAGTTGAGAGAGATGTTACCTTATGGAGCTGTTGCTCATGAAGCT 763
Query 349 TTCCTGCATTTCTTGAACTATATCTACACTGGGAGGTTAAAGCCTTTTCCTA-TCGAGGT 407
||| || ||||||||| ||||| || |||||||| |||||||||||||| | | |||||
Sbjct 764 TTCTTGTATTTCTTGAGTTATATATATACTGGGAGATTAAAGCCTTTTCC-ATTGGAGGT 822
Query 408 TTCGACTTGTGTTGATTCAGTTTGTGCTCATGATTCTTGTAAACCGGCCATTGATTTTGC 467
|||||||||||||||| |||||||| ||||||||| |||| ||| |||||||||||||
Sbjct 823 TTCGACTTGTGTTGATCCAGTTTGTTCTCATGATTGTTGTCGACCTGCCATTGATTTTGT 882
Query 468 TGTTGAGTTGATGTATGCTTCATTTGTGT-TCCAAATCCCGGACCTGGTTTCATCATTTC 526
|||| | |||||||||||||| | ||| | ||||| | || || || |||||||| ||||
Sbjct 883 TGTTCAATTGATGTATGCTTCCTCTGT-TCTCCAAGTGCCTGAGCTAGTTTCATCTTTTC 941
Query 527 AGCGGAAGCTTTGTAGCTATGTTGG-GAAGTCACTAGTTGAGAATGTTCTTCCGATCCTC 585
||||| |||||||| || || ||| |||| | || ||||||||||||||||| || ||
Sbjct 942 AGCGGCGGCTTTGTAACTTTG-TGGAGAAGACCCTTGTTGAGAATGTTCTTCCCAT--TC 998
Query 586 TTA--GTTGCGTTTC-ATTGTGATTTGACGCAGCTTCTTGATCAATGCATAGAGAGAGTG 642
||| ||||| |||| ||||| | ||||| |||||||||||||| || || |||||||||
Sbjct 999 TTATGGTTGC-TTTCAATTGTAAGTTGACTCAGCTTCTTGATCAGTGTATTGAGAGAGTG 1057
Query 643 GCTAGATCAGAT-TTAGACAGATTCTGCATTGAAAAGG-AGCTTCCTTTCGAAGTATCGG 700
|| || |||||| || |||| ||||| |||||||||| || ||||| ||||||| | |
Sbjct 1058 GCGAGGTCAGATCTT-TACAGGTTCTGTATTGAAAAGGAAG-TTCCTCCCGAAGTAGCAG 1115
Query 701 AAAAAATCAAACAGCTTCGAGTTA-AGT---CG---G-TGAACATACC--T--GAGGAGG 748
| || || |||||||||||| ||| | | || | ||| | ||| | | ||
Sbjct 1116 AGAAGATTAAACAGCTTCGACTTATA-TCCCCGCAAGACGAAGAAACCAGTCCCAAGATT 1174
Query 749 T-GGATAAATCGCTAGAGAGAACCGGGAAAGTACTCAAGGCATTGGATTCAGATGATGTG 807
| ||| |||| ||| || |||| ||| ||| | |||||||| |||||||||||||||||
Sbjct 1175 TCGGAGAAATTGCTTGAAAGAATCGGTAAAATTCTCAAGGCCTTGGATTCAGATGATGTT 1234
Query 808 GAACTCGTGAAGCTTCTTTTGACTGAGTCAGATATAACTCTAGACCAAGCCAATGGTCTG 867
|| || ||||||||||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct 1235 GAGCTTGTGAAGCTTCTTTTGACTGAGTCAGATATCACTCTAGATCAAGCCAATGGTCTG 1294
Query 868 CATTATGCAGTGGCT-TACAGTGATCCGAAAGTTGT-GACCCAGGTTCTTGATCTAAATA 925
|||||| | || | | || ||||||||||||||||| | || || |||||| ||| |||
Sbjct 1295 CATTATTCTGTTG-TGTATAGTGATCCGAAAGTTGTTG-CCGAGATTCTTGCTCTGGATA 1352
Query 926 TGGCTGATGTTAATTTCAGAAATTCCAGAGGGTATACA-G-TTCTTCATATTGCTGCTAT 983
||| |||||| || | ||| |||||| | |||| |||| | |||||||| ||||||| ||
Sbjct 1353 TGGGTGATGTGAACTACAGGAATTCCCG-GGGT-TACACGGTTCTTCATTTTGCTGCGAT 1410
Query 984 GCGTAGAGAGCCAACAATTATTATACCACTTATTCAA-AAAGGAGCTCA-TGCTTCGGA- 1040
||||||||||||| | || |||||| | ||||| | | ||||| || || ||| || ||
Sbjct 1411 GCGTAGAGAGCCATCGATCATTATATCGCTTAT-CGATAAAGGCGC-CAATGCATCTGAG 1468
Query 1041 TTTCACGTTTGATGGACGCAGTGCGGTTAATATATGTAGGA-GACTCACTAGGCCAAAAG 1099
||| || | ||| ||||| || || |||||||||| || || |||| || | ||||| |
Sbjct 1469 TTT-ACATCTGACGGACGTAGCGCAGTTAATATAT-TAAGAAGACTGACAAATCCAAAGG 1526
Query 1100 ATTATCATAGCAAAAC--CTCAAGGAAA-GAACCTAGTAAAGACC-GCTTATGCATCGAT 1155
||||||||| |||||| || |||| ||| ||||||||| || | ||||||||||||
Sbjct 1527 ATTATCATACCAAAACAGCTAAAGGGCGTGAATCTAGTAAAG-CCAGGTTATGCATCGAT 1585
Query 1156 ATCTTGGAAAGGGAAATTAG-AAGGAATCC-ATTGGTTAGTGGGGATACACCCACT-TGT 1212
||||||||||| ||||| || ||| || || || |||| | | ||||||| | | |||
Sbjct 1586 ATCTTGGAAAGAGAAATCAGGAAG-AACCCCAT-GGTTC-TAG--ATACACCAA-TGTGT 1639
Query 1213 TCCCATT-CGATGCCCGAGGATCTCCAAATGAGGTTGTTATACTTAGAAAAGCGAGTGGG 1271
||| ||| | ||||| || |||||||| ||||| |||| ||| |||||||| |||||||
Sbjct 1640 TCC-ATTTCTATGCCTGAAGATCTCCAGATGAGACTGTTGTACCTAGAAAAGAGAGTGGG 1698
Query 1272 ACTTGCTCAGTTGTTCTTCCCAGCAGAAGCTAATGTGGCCATGGACGTTGCTAATGTTGA 1331
||||||||||||||||| ||| | |||||||| || || |||||| ||| ||| || ||
Sbjct 1699 GCTTGCTCAGTTGTTCTTTCCAACGGAAGCTAAAGTTGCTATGGACATTGGTAACGTAGA 1758
Query 1332 AGGGACAAGCGAGTGCACAGGTCTTCTAACTCCACCTCCATCAAATGG-TACAACCGGAA 1390
||| ||||| |||| ||| ||| || | | |||||| || | ||| | ||||||||
Sbjct 1759 AGGTACAAGTGAGTTCACGGGT-TTGT--C---ACCTCCTTCGAGTGGGTT-AACCGGAA 1811
Query 1391 ACTTGGGTAAAGTCGATTTAAATGAAACGCCTTATGTGCAAACGAAAAGAATGCTTACAC 1450
||||| || | || |||||||| ||||| ||| || ||||||| ||||| | ||||| |
Sbjct 1812 ACTTGAGTCAGGTTGATTTAAACGAAACTCCTCATATGCAAACCCAAAGACTTCTTACTC 1871
Query 1451 GTATGGAAGCCCTCATGAAAACAGTTGAGACAGGTCGGAGGTATTTCCCATCTTGTTCTG 1510
|||||| || || ||||||||||||||||| ||||| |||| ||| |||| | |||| |
Sbjct 1872 GTATGGTGGCTCTAATGAAAACAGTTGAGACTGGTCGAAGGTTTTTTCCATATGGTTCAG 1931
Query 1511 AGGTTCTTGATAGGCACATGGATGAGTATATGGACGAAGACATCC-CTGAT-ATGTCACA 1568
||||||| |||| | |||||| ||||||||| ||||| ||||||| | || || || ||
Sbjct 1932 AGGTTCTAGATAAGTACATGGCTGAGTATATAGACGACGACATCCTC-GACGATTTC-CA 1989
Query 1569 TCCCGAAAAAGGCACTGTGA-A-A-GAGAGAAGACAGAAGAGAATGAGATATA-ACGAGC 1624
| || || || | | | | | | || |||||| ||| ||||||||||||| | ||||
Sbjct 1990 TTTTGAGAAGGG-A-TCT-ACACATGAAAGAAGATTGAAAAGAATGAGATATAGA-GAGC 2045
Query 1625 TGAAGAACGACGTTAAGAAAG-CGTATAGCAAAGACAAAGAGGCCAAGATCGCGCGGTCT 1683
| ||| | || || | |||| | |||||||||||||||||| | ||||| |||||||||
Sbjct 2046 TTAAGGATGATGTCCA-AAAGGCATATAGCAAAGACAAAGAGTCTAAGATTGCGCGGTCT 2104
Query 1684 TGTCTTTCTTCTTCATCACCAGCTTCTTCT 1713
||||||||| ||||||| | ||||||||
Sbjct 2105 TGTCTTTCTGCTTCATCTTCTCCTTCTTCT 2134
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 86194335765
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5