BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg890379
Length=1182
Score E
Sequences producing significant alignments: (Bits) Value
AT4G18197.1 | Symbols: ATPUP7, PEX17, PUP7 | purine permease 7 ... 1705 0.0
AT4G18205.1 | Symbols: | Nucleotide-sugar transporter family p... 1581 0.0
AT4G18195.1 | Symbols: ATPUP8, PUP8 | purine permease 8 | chr4:... 1094 0.0
> AT4G18197.1 | Symbols: ATPUP7, PEX17, PUP7 | purine permease
7 | chr4:10071634-10073236 FORWARD LENGTH=1521
Length=1521
Score = 1705 bits (923), Expect = 0.0
Identities = 1105/1190 (93%), Gaps = 23/1190 (2%)
Strand=Plus/Plus
Query 1 ATGGACAGATCTCAAGAGCTCTATGCTAATGGTGACCAGAACTTAGAAGCAAACCTTATA 60
||||||||||||||||| | |||||| ||||||||||||||||||||||||||||||||
Sbjct 142 ATGGACAGATCTCAAGAACACTATGCCAATGGTGACCAGAACTTAGAAGCAAACCTTAT- 200
Query 61 AG-TCATGA---GGTAACTG-A--ATCATCATC-G--GTACCTCAAA-CGACAAACTATA 109
|| |||||| |||||||| | ||||||||| | || ||||||| ||| |||||||
Sbjct 201 AGATCATGAGGTGGTAACTGAATCATCATCATCAGCTGTGCCTCAAACCGA-GAACTATA 259
Query 110 AAAGGTGGCTCCGTGTCTCCATATACGTTATCTTTGTCCTATTCTGCCAACCACTTGCTA 169
|||||||||| ||||||||||||||||| ||||||||||| || ||||| ||||| ||||
Sbjct 260 AAAGGTGGCTTCGTGTCTCCATATACGTAATCTTTGTCCTCTTTTGCCAGCCACTAGCTA 319
Query 170 CAATTCTGGGTAGATTGTACTATGAAAATGGAGGGAATAGCACATATGTGGTAACACTTC 229
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 320 CAATTCTGGGTAGATTGTACTATGAAAATGGAGGAAATAGCACATATGTGGTAACACTTC 379
Query 230 TTCAACTCATTGGCTTCCCTGTTCTGGTTCTCTTCCGCTTCTTTTCACGAATCAGACAAC 289
|||||||||||||||||||||| |||||||| |||||||||||||| |||||||| ||||
Sbjct 380 TTCAACTCATTGGCTTCCCTGTACTGGTTCTGTTCCGCTTCTTTTCTCGAATCAGGCAAC 439
Query 290 CCAAATCAACAGATACAAATTTCAGTCAGTCCCCTTCCTTCACCACCCTTGCATCGGTAT 349
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 440 CCAAATCAACAGATACAAATTTCAGTCAGTCCCCTTCCTTCACCACCCTTGCATCGGTTT 499
Query 350 ACATGTGCACTGGACTGCTAGTATCTGCTTATGCTTATTTGTCTGCGGTTGGGTTGCTCT 409
|| ||||||||||||||||||| || |||||||||||||||||||| || ||||||||||
Sbjct 500 ACTTGTGCACTGGACTGCTAGTGTCCGCTTATGCTTATTTGTCTGCAGTAGGGTTGCTCT 559
Query 410 ACTTACCAGTCTCTACTTTCTCCCTCATCTTGGCCTCGCAGTTGGCCTTCACTGCTTTTT 469
||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct 560 ACTTACCAGTCTCTACTTTCTCCCTCATCTTGGCCTCACAGTTGGCCTTCACTGCCTTTT 619
Query 470 TCTCATATTTCCTTAACTCGCAAAAGTTCACTCCTTTCATCGTCAATTCTTTGTTTCTCC 529
||||||||||||||||||||||||||||||||||||| || |||| ||||||| ||||||
Sbjct 620 TCTCATATTTCCTTAACTCGCAAAAGTTCACTCCTTTGATAGTCAGTTCTTTGCTTCTCC 679
Query 530 TCACTGTTTCCTCTGCTCTTCTCGTGGTCAACACTGATTCAGAAAACTCAGC-AACTGTA 588
||||||| |||||||||||||| ||||||||||||||||||||||||||| | || ||||
Sbjct 680 TCACTGTATCCTCTGCTCTTCTTGTGGTCAACACTGATTCAGAAAACTCAACTAA-TGTA 738
Query 589 TCTAGAGTACAATATGTGATCGGGTTCATATGTACCATTGGTGCTTCTGCTGGGATTGGA 648
||||||||||| |||||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct 739 TCTAGAGTACAGTATGTGATCGGGTTCATATGTACCATCGGTGCTTCCGCTGGGATTGGA 798
Query 649 CTGCTACTATCTCTGATACAACTGCTCTTCAGGAAAGTTTTCACGAATCATACATCGTCG 708
||| ||||||||||||||||| ||||||||||||||||||||||||| |||||||| ||
Sbjct 799 CTGTTACTATCTCTGATACAAATGCTCTTCAGGAAAGTTTTCACGAAGCATACATCCTCA 858
Query 709 GCAGTCATGGACTTGGCCATTTACCAGTCTCTCGTTGCAAGTTGTGTGGTTCTCATAGGA 768
||||||| |||||||||||||||||||||||| ||||| |||||||| ||||||||||||
Sbjct 859 GCAGTCACGGACTTGGCCATTTACCAGTCTCTAGTTGCGAGTTGTGTAGTTCTCATAGGA 918
Query 769 CTTTTTGCAAGTGGAGAGTGGGAAACTTTGCCAAGTGAGATGAGAAACTACAAACTGGGG 828
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 919 CTTTTTGCAAGTGGAGAGTGGGAAACTTTGCCAAGTGAGATGAGAAACTACAAACTCGGG 978
Query 829 AAAGTGTCATATATCTTGACTTT-GTCCTCAGCAGCTATTTCCTGGCAAGTATACACTCT 887
|||||||||||| | |||||||| | |||| |||||||||||||||||||| ||||||||
Sbjct 979 AAAGTGTCATATGTTTTGACTTTAG-CCTCGGCAGCTATTTCCTGGCAAGTCTACACTCT 1037
Query 888 TGGTCTCGTGGGATTGATCTTCGAGTCATCCTCTGTGTTCTCCAATTCCATTACAGCTGT 947
|||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1038 TGGTCTTGTGGGATTGATCTTCGAGTCATCCTCTGTGTTCTCCAATTCCATAACAGCTGT 1097
Query 948 GGGATTGCCTATAGTTCCAGTTGTAGCAGTGATAGTTTTCCACGATAAGA-TGGACGCAT 1006
||||||||||||||||||||||| ||||||||||||||||| |||| || |||||||||
Sbjct 1098 GGGATTGCCTATAGTTCCAGTTGCGGCAGTGATAGTTTTCCATGATA-GAATGGACGCAT 1156
Query 1007 CAAAAATCTTCTCCATCATTTTAGCTATCTGGGGCTTCCTTTCATTTGTCTATCAGCACT 1066
|||||||||||||||| |||||||||||||| |||||||||||||| |||||||||||||
Sbjct 1157 CAAAAATCTTCTCCATTATTTTAGCTATCTGCGGCTTCCTTTCATTCGTCTATCAGCACT 1216
Query 1067 ACCTCGACGAAAA-AATGTTGAAGACTAGCCACACAAGTGCTGTAGAAGATCTTCACCTA 1125
||||||||||||| || |||||| |||||||||||||||||||||| ||||||||| |||
Sbjct 1217 ACCTCGACGAAAAGAA-GTTGAATACTAGCCACACAAGTGCTGTAGGAGATCTTCATCTA 1275
Query 1126 CCTGTTGAGGAAGGTCACACAAACATACAAACT-TATGATCAT-GCATAT 1173
||||||||||||||||||||||||||||||| | | |||||| ||||||
Sbjct 1276 CCTGTTGAGGAAGGTCACACAAACATACAAAGTGTGTGATCAAAGCATAT 1325
> AT4G18205.1 | Symbols: | Nucleotide-sugar transporter family
protein | chr4:10073758-10075271 FORWARD LENGTH=1432
Length=1432
Score = 1581 bits (856), Expect = 0.0
Identities = 1027/1109 (93%), Gaps = 14/1109 (1%)
Strand=Plus/Plus
Query 1 ATGGACAGATCTCAAG-AGCTCTA-TGCTAATGGTGACCAGAACTTAGAAGCAAACCTTA 58
|||| || |||||||| | | ||| ||| ||||||||||||||||||||||||||||||
Sbjct 93 ATGGGCATATCTCAAGTA-CACTATTGC-AATGGTGACCAGAACTTAGAAGCAAACCTTC 150
Query 59 TAAG-TCATGAGGTAACTGAATCATCATCGGTACCTCAAACGACA-AACTATAAAAGGTG 116
| || |||||||| ||||||||||| || ||||||||||||| | |||| ||| |||||
Sbjct 151 T-AGATCATGAGGAAACTGAATCATTTTCAGTACCTCAAACGA-AGAACTGTAAGAGGTG 208
Query 117 GCTCCGTGTCTCCATATACGTTATCTTTGTCCTATTCTGCCAACCACTTGCTACAATTCT 176
|||||||||||||||||||| ||||||||| | ||||||||||||||||||||| ||||
Sbjct 209 GCTCCGTGTCTCCATATACGCAATCTTTGTCATCTTCTGCCAACCACTTGCTACAGTTCT 268
Query 177 GGGTAGATTGTACTATGAAAATGGAGGGAATAGCACATATGTGGTAACACTTCTTCAACT 236
||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 269 GGGTAGACTGTACTATGAAAATGGAGGGAAAAGCACATATGTGGTAACACTTCTTCAACT 328
Query 237 CATTGGCTTCCCTGTTCTGGTTCTCTTCCGCTTCTTTTCACGAATCAGACAACCCAAATC 296
||||||||||||||| ||| ||||||||||||||||||| |||||||| |||||||||||
Sbjct 329 CATTGGCTTCCCTGTACTGATTCTCTTCCGCTTCTTTTCTCGAATCAGGCAACCCAAATC 388
Query 297 AACAGATACAAATTTCAGTCAGTCCCCTTCCTTCACCACCCTTGCATCGGTATACATGTG 356
||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||
Sbjct 389 AACAGATACAAATTTCAGTCAGTCCCCTTCCTTCACCACCCTTGCATCGGTTTACTTGTG 448
Query 357 CACTGGACTGCTAGTATCTGCTTATGCTTATTTGTCTGCGGTTGGGTTGCTCTACTTACC 416
||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct 449 CACTGGACTGCTAGTGTCTGCTTATGCTTATTTGTCTGCAGTTGGGTTGCTTTACTTACC 508
Query 417 AGTCTCTACTTTCTCCCTCATCTTGGCCTCGCAGTTGGCCTTCACTGCTTTTTTCTCATA 476
|||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct 509 AGTCTCTACTTTCTCCCTCATCTTGGCCTCACAGTTGGCCTTCACTGCCTTTTTCTCATA 568
Query 477 TTTCCTTAACTCGCAAAAGTTCACTCCTTTCATCGTCAATTCTTTGTTTCTCCTCACTGT 536
|||||||||||||||||||||||||||||| || |||||||||||||||||||| || ||
Sbjct 569 TTTCCTTAACTCGCAAAAGTTCACTCCTTTGATAGTCAATTCTTTGTTTCTCCTTACGGT 628
Query 537 TTCCTCTGCTCTTCTCGTGGTCAACACTGATTCAGAAAACTCAGCAACTGTATCTAGAGT 596
||||||||| || ||||||||||||||||||||||||||| || ||| ||||||||||||
Sbjct 629 TTCCTCTGCCCTCCTCGTGGTCAACACTGATTCAGAAAACACAACAAATGTATCTAGAGT 688
Query 597 ACAATATGTGATCGGGTTCATATGTACCATTGGTGCTTCTGCTGGGATTGGACTGCTACT 656
|||||||||||| |||||||| ||||||||||||||||| |||||||||||| || ||||
Sbjct 689 ACAATATGTGATTGGGTTCATCTGTACCATTGGTGCTTCCGCTGGGATTGGATTGGTACT 748
Query 657 ATCTCTGATACAACTGCTCTTCAGGAAAGTTTTCACGAATCATACATCGTCGGCAGTCAT 716
||||||||||||||||||||||||||||||||||||||| |||||||| || |||||| |
Sbjct 749 ATCTCTGATACAACTGCTCTTCAGGAAAGTTTTCACGAAGCATACATCCTCAGCAGTCCT 808
Query 717 GGACTTGGCCATTTACCAGTCTCTCGTTGCAAGTTGTGTGGTTCTCATAGGACTTTTTGC 776
||||||||||| |||||||||||| ||||||| ||||||||| ||||||||||| |||||
Sbjct 809 GGACTTGGCCAATTACCAGTCTCTAGTTGCAACTTGTGTGGTACTCATAGGACTGTTTGC 868
Query 777 AAGTGGAGAGTGGGA-AACTTTGCCAAGTGAGATGAGAAACTACAAACTGGGGAAAGTGT 835
||||||||||| ||| |||| |||||||||||||||||||||||||||||||||||||||
Sbjct 869 AAGTGGAGAGT-GGAGAACTCTGCCAAGTGAGATGAGAAACTACAAACTGGGGAAAGTGT 927
Query 836 CATATATCTTGACTTTGTCCTCAGCAGCTATTTCCTGGCAAGTATACACTCTTGG-TCTC 894
||||||||||||||||| ||||||||||||||| |||||||||||||||| |||| | |
Sbjct 928 CATATATCTTGACTTTGGCCTCAGCAGCTATTTTCTGGCAAGTATACACTGTTGGTTGT- 986
Query 895 GTGGGATTGATCTTCGAGTCATCCTCTGTGTTCTCCAATTCCATTACAGCTGTGGGATTG 954
|||||||| ||||||||||| || |||||||||||||||||||| || ||||||||| ||
Sbjct 987 GTGGGATTAATCTTCGAGTCTTCTTCTGTGTTCTCCAATTCCATAACTGCTGTGGGACTG 1046
Query 955 CCTATAGTTCCAGTTGTAGCAGTGATAGTTTTCCACGATAAGATGGACGCATCAAAAATC 1014
||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| ||
Sbjct 1047 CCTATAGTTCCAGTTGTAGCAGTGATAGTTTTCCATGATAAGATGGATGCATCAAAGATT 1106
Query 1015 TTCTCCATCATTTTAGCTATCTGGGGCTTCCTTTCATTTGTCTATCAGCACTACCTCGAC 1074
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1107 TTCTCCATCATTTTAGCTATCTGGGGCTTCCTTTCATTTGTCTATCAGCACTACCTCGAC 1166
Query 1075 GAAAA-AATGTTGAAGACTAGCCACACAA 1102
||||| || |||||||||| |||| ||||
Sbjct 1167 GAAAAGAA-GTTGAAGACTTGCCAGACAA 1194
> AT4G18195.1 | Symbols: ATPUP8, PUP8 | purine permease 8 | chr4:10069694-10071115
FORWARD LENGTH=1350
Length=1350
Score = 1094 bits (592), Expect = 0.0
Identities = 947/1114 (85%), Gaps = 42/1114 (4%)
Strand=Plus/Plus
Query 76 GAATCATCATCGGTACCTCAAACGACA-AACTATAA-AAGGTGGCTCCGTGTCTCCATAT 133
||||| || || ||||||||| ||| | |||||||| || ||||| ||| | ||||| |
Sbjct 118 GAATCTTCGTCCGTACCTCAATCGA-AGAACTATAAGAA-ATGGCTTCGTATTTCCATTT 175
Query 134 ACGT-TATCTTTGTCCTATTC-TGCCAACCACTTGCTACAATTCTGGGTAGA-TTGTACT 190
|||| | |||||||||| | | |||||| ||||| |||||||| |||| ||| || ||||
Sbjct 176 ACGTGT-TCTTTGTCCT-TGCTTGCCAAGCACTTTCTACAATTTTGGGCAGAGTT-TACT 232
Query 191 ATGAAAATGGAGGGAATAGCACATATG-TGGTAACACTTCTTCAACTCATTGGCTTCCCT 249
|||||||||| ||||| || |||| | ||| ||||||| | ||||| || |||||||||
Sbjct 233 ATGAAAATGGTGGGAAGAGTACAT-GGATGGGAACACTTGTCCAACTAATCGGCTTCCCT 291
Query 250 GTTCTGGTTCTCTTCCGCTTCTTTTCACGAATCAGACAA-CCCAAATCAACAGATA-CAA 307
|||||| ||||||||||||||||||| | || || | || |||||| ||||||| | ||
Sbjct 292 GTTCTGTTTCTCTTCCGCTTCTTTTCCCAAACCA-AAAATCCCAAACCAACAGA-AGCAG 349
Query 308 ATTTCAGTCAGTCCCCTTCCTTCACCACCCTTGCATCGGTATACAT-GTGCACTGGACTG 366
||||||| ||| | |||||||||||| |||| ||| || ||||| || ||||||||
Sbjct 350 ATTTCAGAAAGTTCTCTTCCTTCACCATTCTTGGATCAGTTTACATCGT-TACTGGACTA 408
Query 367 CTAGTATCTGCTTA-TGCTTATTTGT-CTGCGGTTGGGTTGCTCTACTTACCAGTCTCTA 424
|||| |||||| | | ||||| ||| || | ||||| || || ||||||||||| ||||
Sbjct 409 TTAGTGTCTGCTAACT-CTTATATGTCCT-CTGTTGGTTTACTATACTTACCAGTTTCTA 466
Query 425 CTTTCTCCCTCATCTTGGCCTCGCAGTTGGCCTTCACTGCTTTTTTCTCATATTTCCTTA 484
|||||||||||||||||||||| || |||||||||||||| || ||||||||||| || |
Sbjct 467 CTTTCTCCCTCATCTTGGCCTCACAATTGGCCTTCACTGCCTTCTTCTCATATTTTCTAA 526
Query 485 ACTCGCAAAAGTTCACTCCTTTCATCGTCAATTCTTTGTTTCTCCTCACTGTTTCCTCTG 544
||||||| |||||||| |||||||| || |||||| |||||||||| ||| |||||||||
Sbjct 527 ACTCGCAGAAGTTCACACCTTTCATTGTGAATTCTCTGTTTCTCCTTACTATTTCCTCTG 586
Query 545 CTCTTCTCGTGGTCAACACTGATTCAGAAAACTCAGCAACTGTATCTAGAGTACAATATG 604
| || |||||||||||||||||||| |||||| |||||| || ||||||||| ||||||
Sbjct 587 CCCTCCTCGTGGTCAACACTGATTCGGAAAACACAGCAAAAGTGTCTAGAGTAAAATATG 646
Query 605 TGATCGGGTTCATATGTACCATTGGTGCTTCTGCTGGGATTGGACTGCTACTATCTCTGA 664
|||| ||| | ||||||||||||||||||||||||||||||||| |||| ||||| |||
Sbjct 647 TGATAGGGATAATATGTACCATTGGTGCTTCTGCTGGGATTGGATTGCTGCTATCCCTGG 706
Query 665 TACAACTGCTCTTCAGGAAAGTTTTCACGAATCATACA-TCGTCGGCAGTCA-TGGACTT 722
|||||||| || ||||||| ||||| | ||| || ||| || || | |||| | |||||
Sbjct 707 TACAACTGATCCTCAGGAAGGTTTTAAAGAAGCAAACATTC-TCAACGGTCACT-GACTT 764
Query 723 GGCCATTTACCAGTCTCTCGTTGCAAGTTGTGTGGTTCTCATAGGACTTTTTGCAAGTGG 782
|| | |||||| ||||| |||||||| ||||||||||||||||||||||| ||||| ||
Sbjct 765 GGTCGCTTACCAATCTCTAGTTGCAAGCTGTGTGGTTCTCATAGGACTTTTCGCAAGCGG 824
Query 783 AGAGTGGGAAACTTTGCCAAGTGAGAT-GAGAAACTACAAACTGGGGAAAGTGTCATATA 841
|||||| ||||||| |||||||||| || |||||||||||||||||||||| ||||
Sbjct 825 GGAGTGGAAAACTTTAACAAGTGAGATGGA-AAACTACAAACTGGGGAAAGTGCCATACG 883
Query 842 TCT-TGACTTTGTCCTCAG-CAGCTATTTCCTGGCAAGTATACACTC-TTGGTC-TCGTG 897
| | |||||||| |||| | |||||||||||||||||| ||||| | |||| | |||||
Sbjct 884 T-TATGACTTTGGCCTC-GATAGCTATTTCCTGGCAAGTCTACAC-CATTGG-CGTCGTG 939
Query 898 GGATTGATCTTCGAGTCATCCTCTGTGTTCTCCAATTCCATTACAGCTGTGGGATTGCCT 957
||| ||||||| |||||||| |||||||||||||||||||| || |||||||||||||||
Sbjct 940 GGACTGATCTTTGAGTCATCTTCTGTGTTCTCCAATTCCATAACTGCTGTGGGATTGCCT 999
Query 958 ATAGTTCCAGTTGTAGCAGTGATAGTTTTCCACGATAAGATGGACGCATCAAAAATCTTC 1017
||||||||||||||||||||||| |||||||| ||||| ||| |||| ||||| ||||||
Sbjct 1000 ATAGTTCCAGTTGTAGCAGTGATTGTTTTCCATGATAAAATGAACGCGTCAAAGATCTTC 1059
Query 1018 TCCATCATTTTAGCTATCTGGGGCTTCCTTTCATTTGTCTATCAGCACTACCTCGACGAA 1077
||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||
Sbjct 1060 TCCATCATTTTAGCTATCTGGGGATTCATTTCATTTGTCTATCAGCACTACCTCGACGAA 1119
Query 1078 AA-AATGTTGAAGACTAGCCACACAAGTGCTGTAGAAGATCTTCA-C--CTACCTGTTGA 1133
|| || |||||||||||||||||||||| |||||| ||||| ||| | ||||||| |||
Sbjct 1120 AAGAA-GTTGAAGACTAGCCACACAAGTCCTGTAGGAGATCCTCATCTACTACCTGCTGA 1178
Query 1134 GGAAGGTCACACAAACATACAAACT-TATGATCA 1166
||||||||||||||||||||| | | ||||||||
Sbjct 1179 GGAAGGTCACACAAACATACATAGTGTATGATCA 1212
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 58031830020
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5